RNA–Protein interactions for RNA: ENST00000377126.3

KLF9-201, Transcript of Kruppel like factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF9, Length 5,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF9-201ENST00000377126 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
KLF9-201ENST00000377126 ANP32AP39687 249 aaKnown RBP28.88■■■□□ 2.21
KLF9-201ENST00000377126 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
KLF9-201ENST00000377126 TMC1Q8TDI8 760 aa28.84■■■□□ 2.21
KLF9-201ENST00000377126 SIN3AQ96ST3 1273 aa28.81■■■□□ 2.2
KLF9-201ENST00000377126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.81■■■□□ 2.2
KLF9-201ENST00000377126 KDM2AQ9Y2K7 1162 aa28.79■■■□□ 2.2
KLF9-201ENST00000377126 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
KLF9-201ENST00000377126 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
KLF9-201ENST00000377126 SALL2Q9Y467 1007 aaPredicted RBP28.7■■■□□ 2.19
KLF9-201ENST00000377126 PLEKHD1A6NEE1 506 aa28.68■■■□□ 2.18
KLF9-201ENST00000377126 NPM2Q86SE8 214 aaKnown RBP28.68■■■□□ 2.18
KLF9-201ENST00000377126 CHGAP10645 457 aaKnown RBP28.67■■■□□ 2.18
KLF9-201ENST00000377126 NEFMP07197 916 aa28.67■■■□□ 2.18
KLF9-201ENST00000377126 CCDC136Q96JN2 1154 aa28.66■■■□□ 2.18
KLF9-201ENST00000377126 IRX6P78412 446 aaPredicted RBP28.66■■■□□ 2.18
KLF9-201ENST00000377126 CFDP1Q9UEE9 299 aaPredicted RBP28.65■■■□□ 2.18
KLF9-201ENST00000377126 SETD5Q9C0A6 1442 aa28.63■■■□□ 2.17
KLF9-201ENST00000377126 ZBTB47Q9UFB7 747 aaPredicted RBP28.62■■■□□ 2.17
KLF9-201ENST00000377126 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
KLF9-201ENST00000377126 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
KLF9-201ENST00000377126 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
KLF9-201ENST00000377126 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
KLF9-201ENST00000377126 NPM1P06748 294 aaKnown RBP eCLIP28.56■■■□□ 2.16
KLF9-201ENST00000377126 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
KLF9-201ENST00000377126 WDR43Q15061 677 aaKnown RBP eCLIP28.51■■■□□ 2.15
KLF9-201ENST00000377126 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
KLF9-201ENST00000377126 RAB3GAP2Q9H2M9 1393 aa28.48■■■□□ 2.15
KLF9-201ENST00000377126 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.43■■■□□ 2.14
KLF9-201ENST00000377126 KCNH8Q96L42 1107 aa28.43■■■□□ 2.14
KLF9-201ENST00000377126 SUPT16HQ9Y5B9 1047 aaKnown RBP28.43■■■□□ 2.14
KLF9-201ENST00000377126 RGL3Q3MIN7 710 aa28.41■■■□□ 2.14
KLF9-201ENST00000377126 CARD11Q9BXL7 1154 aa28.4■■■□□ 2.14
KLF9-201ENST00000377126 BCL11AQ9H165 835 aa28.39■■■□□ 2.14
KLF9-201ENST00000377126 STAG3Q9UJ98 1225 aa28.39■■■□□ 2.13
KLF9-201ENST00000377126 FMN1Q68DA7 1419 aa28.38■■■□□ 2.13
KLF9-201ENST00000377126 ANP32EQ9BTT0 268 aa28.37■■■□□ 2.13
KLF9-201ENST00000377126 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
KLF9-201ENST00000377126 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
KLF9-201ENST00000377126 ESF1Q9H501 851 aaKnown RBP28.32■■■□□ 2.12
KLF9-201ENST00000377126 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
KLF9-201ENST00000377126 SLC24A1O60721 1099 aa28.29■■■□□ 2.12
KLF9-201ENST00000377126 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
KLF9-201ENST00000377126 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
KLF9-201ENST00000377126 UPF2Q9HAU5 1272 aaKnown RBP28.25■■■□□ 2.11
KLF9-201ENST00000377126 FHOD3Q2V2M9 1422 aa28.24■■■□□ 2.11
KLF9-201ENST00000377126 DHX57Q6P158 1386 aaKnown RBP28.23■■■□□ 2.11
KLF9-201ENST00000377126 EIF5BO60841 1220 aaKnown RBP28.22■■■□□ 2.11
KLF9-201ENST00000377126 HSPA5P11021 654 aaKnown RBP28.22■■■□□ 2.11
KLF9-201ENST00000377126 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
KLF9-201ENST00000377126 NBR1Q14596 966 aa28.2■■■□□ 2.1
KLF9-201ENST00000377126 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
KLF9-201ENST00000377126 PPP4R2Q9NY27 417 aa28.19■■■□□ 2.1
KLF9-201ENST00000377126 CDCA8Q53HL2 280 aa28.19■■■□□ 2.1
KLF9-201ENST00000377126 KNSTRNQ9Y448 316 aa28.16■■■□□ 2.1
KLF9-201ENST00000377126 MPHOSPH9Q99550 1183 aa28.11■■■□□ 2.09
KLF9-201ENST00000377126 FOXD1Q16676 465 aa28.11■■■□□ 2.09
KLF9-201ENST00000377126 DCAF11Q8TEB1 546 aa28.1■■■□□ 2.09
KLF9-201ENST00000377126 PKD2Q13563 968 aa28.05■■■□□ 2.08
KLF9-201ENST00000377126 HSP90AA1P07900 732 aaKnown RBP28.03■■■□□ 2.08
KLF9-201ENST00000377126 CARMIL2Q6F5E8 1435 aa28.01■■■□□ 2.07
KLF9-201ENST00000377126 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
KLF9-201ENST00000377126 KIF21BO75037 1637 aa27.99■■■□□ 2.07
KLF9-201ENST00000377126 IGF1RP08069 1367 aa27.97■■■□□ 2.07
KLF9-201ENST00000377126 CC2D1BQ5T0F9 858 aaKnown RBP27.96■■■□□ 2.07
KLF9-201ENST00000377126 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
KLF9-201ENST00000377126 TMF1P82094 1093 aa27.94■■■□□ 2.06
KLF9-201ENST00000377126 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
KLF9-201ENST00000377126 DDRGK1Q96HY6 314 aa27.93■■■□□ 2.06
KLF9-201ENST00000377126 L3MBTL2Q969R5 705 aa27.92■■■□□ 2.06
KLF9-201ENST00000377126 ANKRD30AQ9BXX3 1397 aa27.91■■■□□ 2.06
KLF9-201ENST00000377126 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
KLF9-201ENST00000377126 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
KLF9-201ENST00000377126 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.06
KLF9-201ENST00000377126 NUP155O75694 1391 aa27.88■■■□□ 2.05
KLF9-201ENST00000377126 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
KLF9-201ENST00000377126 PLPPR3Q6T4P5 718 aa27.87■■■□□ 2.05
KLF9-201ENST00000377126 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
KLF9-201ENST00000377126 GLIPR1L2Q4G1C9 344 aa27.83■■■□□ 2.05
KLF9-201ENST00000377126 ERICH6BQ5W0A0 696 aa27.82■■■□□ 2.04
KLF9-201ENST00000377126 KANK1Q14678 1352 aa27.79■■■□□ 2.04
KLF9-201ENST00000377126 ANP32BQ92688 251 aaKnown RBP27.79■■■□□ 2.04
KLF9-201ENST00000377126 RBM19Q9Y4C8 960 aaKnown RBP27.79■■■□□ 2.04
KLF9-201ENST00000377126 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
KLF9-201ENST00000377126 NEUROD2Q15784 382 aa27.77■■■□□ 2.04
KLF9-201ENST00000377126 MYH16Q9H6N6 1097 aa27.77■■■□□ 2.04
KLF9-201ENST00000377126 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.04
KLF9-201ENST00000377126 BECN1Q14457 450 aa27.76■■■□□ 2.03
KLF9-201ENST00000377126 ROCK2O75116 1388 aaKnown RBP27.76■■■□□ 2.03
KLF9-201ENST00000377126 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
KLF9-201ENST00000377126 RALBP1Q15311 655 aa27.72■■■□□ 2.03
KLF9-201ENST00000377126 NOP58Q9Y2X3 529 aaKnown RBP27.72■■■□□ 2.03
KLF9-201ENST00000377126 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.02
KLF9-201ENST00000377126 PHLDB1Q86UU1 1377 aa27.7■■■□□ 2.02
KLF9-201ENST00000377126 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
KLF9-201ENST00000377126 TNNT2P45379 298 aaPredicted RBP27.69■■■□□ 2.02
KLF9-201ENST00000377126 TSHZ2Q9NRE2 1034 aa27.69■■■□□ 2.02
KLF9-201ENST00000377126 NUDCQ9Y266 331 aa27.68■■■□□ 2.02
KLF9-201ENST00000377126 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
KLF9-201ENST00000377126 FTSJ3Q8IY81 847 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms