RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
DFFA-202ENST00000377038 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
DFFA-202ENST00000377038 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.52
DFFA-202ENST00000377038 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
DFFA-202ENST00000377038 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
DFFA-202ENST00000377038 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.51
DFFA-202ENST00000377038 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
DFFA-202ENST00000377038 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
DFFA-202ENST00000377038 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
DFFA-202ENST00000377038 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
DFFA-202ENST00000377038 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
DFFA-202ENST00000377038 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
DFFA-202ENST00000377038 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
DFFA-202ENST00000377038 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
DFFA-202ENST00000377038 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
DFFA-202ENST00000377038 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
DFFA-202ENST00000377038 BCL11AQ9H165 835 aa18.14■□□□□ 0.5
DFFA-202ENST00000377038 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
DFFA-202ENST00000377038 ACIN1Q9UKV3 1341 aaKnown RBP18.13■□□□□ 0.49
DFFA-202ENST00000377038 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
DFFA-202ENST00000377038 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
DFFA-202ENST00000377038 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
DFFA-202ENST00000377038 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
DFFA-202ENST00000377038 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
DFFA-202ENST00000377038 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
DFFA-202ENST00000377038 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
DFFA-202ENST00000377038 RAPGEF2Q9Y4G8 1499 aa18.05■□□□□ 0.48
DFFA-202ENST00000377038 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
DFFA-202ENST00000377038 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
DFFA-202ENST00000377038 FMN1Q68DA7 1419 aa18.02■□□□□ 0.47
DFFA-202ENST00000377038 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
DFFA-202ENST00000377038 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
DFFA-202ENST00000377038 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
DFFA-202ENST00000377038 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
DFFA-202ENST00000377038 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
DFFA-202ENST00000377038 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
DFFA-202ENST00000377038 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
DFFA-202ENST00000377038 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.46
DFFA-202ENST00000377038 MLECQ14165 292 aa17.95■□□□□ 0.46
DFFA-202ENST00000377038 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
DFFA-202ENST00000377038 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
DFFA-202ENST00000377038 KANK1Q14678 1352 aa17.93■□□□□ 0.46
DFFA-202ENST00000377038 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
DFFA-202ENST00000377038 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
DFFA-202ENST00000377038 MIER1Q8N108 512 aa17.89■□□□□ 0.45
DFFA-202ENST00000377038 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
DFFA-202ENST00000377038 RTL5Q5HYW3 569 aaPredicted RBP17.88■□□□□ 0.45
DFFA-202ENST00000377038 EFCAB2Q5VUJ9 269 aa17.87■□□□□ 0.45
DFFA-202ENST00000377038 GGT6Q6P531 493 aa17.87■□□□□ 0.45
DFFA-202ENST00000377038 FKBP8Q14318 412 aa17.87■□□□□ 0.45
DFFA-202ENST00000377038 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
DFFA-202ENST00000377038 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
DFFA-202ENST00000377038 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
DFFA-202ENST00000377038 POGKQ9P215 609 aa17.84■□□□□ 0.45
DFFA-202ENST00000377038 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
DFFA-202ENST00000377038 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
DFFA-202ENST00000377038 KNSTRNQ9Y448 316 aa17.82■□□□□ 0.44
DFFA-202ENST00000377038 PKD2Q13563 968 aa17.8■□□□□ 0.44
DFFA-202ENST00000377038 FOXD1Q16676 465 aa17.79■□□□□ 0.44
DFFA-202ENST00000377038 HNRNPMP52272 730 aaKnown RBP eCLIP17.78■□□□□ 0.44
DFFA-202ENST00000377038 A0A0G2JS52 829 aa17.78■□□□□ 0.44
DFFA-202ENST00000377038 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
DFFA-202ENST00000377038 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.43
DFFA-202ENST00000377038 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
DFFA-202ENST00000377038 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
DFFA-202ENST00000377038 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
DFFA-202ENST00000377038 IGF1RP08069 1367 aa17.75■□□□□ 0.43
DFFA-202ENST00000377038 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
DFFA-202ENST00000377038 PTPRGP23470 1445 aa17.74■□□□□ 0.43
DFFA-202ENST00000377038 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
DFFA-202ENST00000377038 NUP155O75694 1391 aa17.74■□□□□ 0.43
DFFA-202ENST00000377038 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
DFFA-202ENST00000377038 RAB3GAP2Q9H2M9 1393 aa17.73■□□□□ 0.43
DFFA-202ENST00000377038 AQRO60306 1485 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■■□ 23.2
DFFA-202ENST00000377038 HDGFP51858 240 aaKnown RBP17.72■□□□□ 0.43
DFFA-202ENST00000377038 NESP48681 1621 aa17.71■□□□□ 0.43
DFFA-202ENST00000377038 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
DFFA-202ENST00000377038 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
DFFA-202ENST00000377038 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
DFFA-202ENST00000377038 KIF3BO15066 747 aa17.7■□□□□ 0.42
DFFA-202ENST00000377038 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
DFFA-202ENST00000377038 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
DFFA-202ENST00000377038 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
DFFA-202ENST00000377038 CFTRP13569 1480 aa17.68■□□□□ 0.42
DFFA-202ENST00000377038 TMF1P82094 1093 aa17.67■□□□□ 0.42
DFFA-202ENST00000377038 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
DFFA-202ENST00000377038 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
DFFA-202ENST00000377038 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
DFFA-202ENST00000377038 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
DFFA-202ENST00000377038 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
DFFA-202ENST00000377038 MYT1Q01538 1121 aa17.66■□□□□ 0.42
DFFA-202ENST00000377038 CC2D1BQ5T0F9 858 aaKnown RBP17.66■□□□□ 0.42
DFFA-202ENST00000377038 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
DFFA-202ENST00000377038 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.42
DFFA-202ENST00000377038 STK26Q9P289 416 aa17.63■□□□□ 0.41
DFFA-202ENST00000377038 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
DFFA-202ENST00000377038 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
DFFA-202ENST00000377038 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
DFFA-202ENST00000377038 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
DFFA-202ENST00000377038 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms