RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
TNFRSF1B-201ENST00000376259 KIF21BO75037 1637 aa20.01■□□□□ 0.79
TNFRSF1B-201ENST00000376259 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
TNFRSF1B-201ENST00000376259 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
TNFRSF1B-201ENST00000376259 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1B-201ENST00000376259 FBLN2P98095 1184 aa19.98■□□□□ 0.79
TNFRSF1B-201ENST00000376259 FOXD1Q16676 465 aa19.98■□□□□ 0.79
TNFRSF1B-201ENST00000376259 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
TNFRSF1B-201ENST00000376259 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
TNFRSF1B-201ENST00000376259 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
TNFRSF1B-201ENST00000376259 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
TNFRSF1B-201ENST00000376259 ANP32EQ9BTT0 268 aa19.9■□□□□ 0.78
TNFRSF1B-201ENST00000376259 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1B-201ENST00000376259 PPP1R15AO75807 674 aaPredicted RBP19.85■□□□□ 0.77
TNFRSF1B-201ENST00000376259 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
TNFRSF1B-201ENST00000376259 EIF4G1Q04637 1599 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1B-201ENST00000376259 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
TNFRSF1B-201ENST00000376259 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
TNFRSF1B-201ENST00000376259 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
TNFRSF1B-201ENST00000376259 EIF4G2P78344 907 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNFRSF1B-201ENST00000376259 NBR1Q14596 966 aa19.78■□□□□ 0.76
TNFRSF1B-201ENST00000376259 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
TNFRSF1B-201ENST00000376259 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.75
TNFRSF1B-201ENST00000376259 HSPA5P11021 654 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1B-201ENST00000376259 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1B-201ENST00000376259 IGF1RP08069 1367 aa19.75■□□□□ 0.75
TNFRSF1B-201ENST00000376259 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
TNFRSF1B-201ENST00000376259 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
TNFRSF1B-201ENST00000376259 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
TNFRSF1B-201ENST00000376259 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
TNFRSF1B-201ENST00000376259 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
TNFRSF1B-201ENST00000376259 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
TNFRSF1B-201ENST00000376259 CCDC136Q96JN2 1154 aa19.63■□□□□ 0.73
TNFRSF1B-201ENST00000376259 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
TNFRSF1B-201ENST00000376259 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1B-201ENST00000376259 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
TNFRSF1B-201ENST00000376259 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
TNFRSF1B-201ENST00000376259 CUX1P39880 1505 aa19.6■□□□□ 0.73
TNFRSF1B-201ENST00000376259 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
TNFRSF1B-201ENST00000376259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.73
TNFRSF1B-201ENST00000376259 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
TNFRSF1B-201ENST00000376259 CCDC184Q52MB2 194 aa19.58■□□□□ 0.73
TNFRSF1B-201ENST00000376259 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.72
TNFRSF1B-201ENST00000376259 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
TNFRSF1B-201ENST00000376259 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1B-201ENST00000376259 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
TNFRSF1B-201ENST00000376259 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
TNFRSF1B-201ENST00000376259 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
TNFRSF1B-201ENST00000376259 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
TNFRSF1B-201ENST00000376259 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
TNFRSF1B-201ENST00000376259 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.72
TNFRSF1B-201ENST00000376259 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
TNFRSF1B-201ENST00000376259 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1B-201ENST00000376259 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1B-201ENST00000376259 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
TNFRSF1B-201ENST00000376259 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
TNFRSF1B-201ENST00000376259 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1B-201ENST00000376259 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
TNFRSF1B-201ENST00000376259 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
TNFRSF1B-201ENST00000376259 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1B-201ENST00000376259 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
TNFRSF1B-201ENST00000376259 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF1B-201ENST00000376259 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
TNFRSF1B-201ENST00000376259 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.7
TNFRSF1B-201ENST00000376259 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.7
TNFRSF1B-201ENST00000376259 CFTRP13569 1480 aa19.39■□□□□ 0.69
TNFRSF1B-201ENST00000376259 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
TNFRSF1B-201ENST00000376259 FGD6Q6ZV73 1430 aa19.38■□□□□ 0.69
TNFRSF1B-201ENST00000376259 PKD2Q13563 968 aa19.38■□□□□ 0.69
TNFRSF1B-201ENST00000376259 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
TNFRSF1B-201ENST00000376259 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1B-201ENST00000376259 ZBTB47Q9UFB7 747 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1B-201ENST00000376259 NESP48681 1621 aa19.36■□□□□ 0.69
TNFRSF1B-201ENST00000376259 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
TNFRSF1B-201ENST00000376259 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
TNFRSF1B-201ENST00000376259 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
TNFRSF1B-201ENST00000376259 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1B-201ENST00000376259 MAPKBP1O60336 1514 aa19.34■□□□□ 0.69
TNFRSF1B-201ENST00000376259 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
TNFRSF1B-201ENST00000376259 LAS1LQ9Y4W2 734 aaKnown RBP19.33■□□□□ 0.69
TNFRSF1B-201ENST00000376259 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
TNFRSF1B-201ENST00000376259 MSH5O43196 834 aa19.31■□□□□ 0.68
TNFRSF1B-201ENST00000376259 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1B-201ENST00000376259 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1B-201ENST00000376259 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
TNFRSF1B-201ENST00000376259 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
TNFRSF1B-201ENST00000376259 DEKP35659 375 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1B-201ENST00000376259 KIF7Q2M1P5 1343 aa19.24■□□□□ 0.67
TNFRSF1B-201ENST00000376259 PLEKHD1A6NEE1 506 aa19.24■□□□□ 0.67
TNFRSF1B-201ENST00000376259 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
TNFRSF1B-201ENST00000376259 PTPRKQ15262 1439 aa19.22■□□□□ 0.67
TNFRSF1B-201ENST00000376259 PCF11O94913 1555 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1B-201ENST00000376259 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
TNFRSF1B-201ENST00000376259 MYOM3Q5VTT5 1437 aa19.2■□□□□ 0.66
TNFRSF1B-201ENST00000376259 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
TNFRSF1B-201ENST00000376259 PLIN1O60240 522 aa19.19■□□□□ 0.66
TNFRSF1B-201ENST00000376259 CCDC7Q96M83 1385 aa19.18■□□□□ 0.66
TNFRSF1B-201ENST00000376259 CHGAP10645 457 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1B-201ENST00000376259 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
TNFRSF1B-201ENST00000376259 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms