RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
TUBGCP3-202ENST00000375669 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
TUBGCP3-202ENST00000375669 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
TUBGCP3-202ENST00000375669 FANCIQ9NVI1 1328 aa25.29■■□□□ 1.64
TUBGCP3-202ENST00000375669 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
TUBGCP3-202ENST00000375669 CUX1P39880 1505 aa25.26■■□□□ 1.63
TUBGCP3-202ENST00000375669 CUX2O14529 1486 aa25.26■■□□□ 1.63
TUBGCP3-202ENST00000375669 PPP1R15AO75807 674 aaPredicted RBP25.26■■□□□ 1.63
TUBGCP3-202ENST00000375669 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
TUBGCP3-202ENST00000375669 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
TUBGCP3-202ENST00000375669 ERICH6Q7L0X2 663 aa25.23■■□□□ 1.63
TUBGCP3-202ENST00000375669 SETD5Q9C0A6 1442 aa25.23■■□□□ 1.63
TUBGCP3-202ENST00000375669 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
TUBGCP3-202ENST00000375669 ANP32CO43423 234 aa25.18■■□□□ 1.62
TUBGCP3-202ENST00000375669 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
TUBGCP3-202ENST00000375669 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
TUBGCP3-202ENST00000375669 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
TUBGCP3-202ENST00000375669 IGF1RP08069 1367 aa25.08■■□□□ 1.61
TUBGCP3-202ENST00000375669 DEKP35659 375 aaKnown RBP25.05■■□□□ 1.6
TUBGCP3-202ENST00000375669 LRRC9Q6ZRR7 1453 aa25.05■■□□□ 1.6
TUBGCP3-202ENST00000375669 TIAM1Q13009 1591 aa25.04■■□□□ 1.6
TUBGCP3-202ENST00000375669 HNRNPUQ00839 825 aaKnown RBP eCLIP25.02■■□□□ 1.6
TUBGCP3-202ENST00000375669 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
TUBGCP3-202ENST00000375669 TONSLQ96HA7 1378 aa24.95■■□□□ 1.58
TUBGCP3-202ENST00000375669 FHOD3Q2V2M9 1422 aa24.93■■□□□ 1.58
TUBGCP3-202ENST00000375669 CFTRP13569 1480 aa24.88■■□□□ 1.57
TUBGCP3-202ENST00000375669 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
TUBGCP3-202ENST00000375669 CNGB1Q14028 1251 aaPredicted RBP24.84■■□□□ 1.57
TUBGCP3-202ENST00000375669 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
TUBGCP3-202ENST00000375669 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
TUBGCP3-202ENST00000375669 PCF11O94913 1555 aaKnown RBP24.82■■□□□ 1.56
TUBGCP3-202ENST00000375669 ERICH6BQ5W0A0 696 aa24.8■■□□□ 1.56
TUBGCP3-202ENST00000375669 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
TUBGCP3-202ENST00000375669 ANO8Q9HCE9 1232 aaPredicted RBP24.79■■□□□ 1.56
TUBGCP3-202ENST00000375669 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
TUBGCP3-202ENST00000375669 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
TUBGCP3-202ENST00000375669 SENP3-EIF4A1A0A087X0R7 540 aa24.77■■□□□ 1.56
TUBGCP3-202ENST00000375669 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
TUBGCP3-202ENST00000375669 FAM9BQ8IZU0 186 aa24.76■■□□□ 1.55
TUBGCP3-202ENST00000375669 RRP7BPQ9NSQ0 103 aa24.76■■□□□ 1.55
TUBGCP3-202ENST00000375669 PPP4R2Q9NY27 417 aa24.76■■□□□ 1.55
TUBGCP3-202ENST00000375669 MAP3K1Q13233 1512 aa24.75■■□□□ 1.55
TUBGCP3-202ENST00000375669 WASHC2AQ641Q2 1341 aa24.74■■□□□ 1.55
TUBGCP3-202ENST00000375669 HSPA5P11021 654 aaKnown RBP24.73■■□□□ 1.55
TUBGCP3-202ENST00000375669 B4GALNT3Q6L9W6 998 aa24.73■■□□□ 1.55
TUBGCP3-202ENST00000375669 NOP58Q9Y2X3 529 aaKnown RBP24.72■■□□□ 1.55
TUBGCP3-202ENST00000375669 CCDC18Q5T9S5 1454 aa24.72■■□□□ 1.55
TUBGCP3-202ENST00000375669 FOXD1Q16676 465 aa24.71■■□□□ 1.55
TUBGCP3-202ENST00000375669 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.554e-7■■■■■ 31
TUBGCP3-202ENST00000375669 NBR1Q14596 966 aa24.69■■□□□ 1.54
TUBGCP3-202ENST00000375669 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
TUBGCP3-202ENST00000375669 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
TUBGCP3-202ENST00000375669 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
TUBGCP3-202ENST00000375669 FGD6Q6ZV73 1430 aa24.67■■□□□ 1.54
TUBGCP3-202ENST00000375669 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
TUBGCP3-202ENST00000375669 C11orf95C9JLR9 678 aaPredicted RBP24.65■■□□□ 1.54
TUBGCP3-202ENST00000375669 PAK3O75914 559 aaPredicted RBP24.62■■□□□ 1.53
TUBGCP3-202ENST00000375669 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
TUBGCP3-202ENST00000375669 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
TUBGCP3-202ENST00000375669 CFAP43Q8NDM7 1665 aa24.6■■□□□ 1.53
TUBGCP3-202ENST00000375669 SALL2Q9Y467 1007 aaPredicted RBP24.59■■□□□ 1.53
TUBGCP3-202ENST00000375669 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
TUBGCP3-202ENST00000375669 NAIPQ13075 1403 aa24.57■■□□□ 1.52
TUBGCP3-202ENST00000375669 CASKIN1Q8WXD9 1431 aa24.56■■□□□ 1.52
TUBGCP3-202ENST00000375669 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
TUBGCP3-202ENST00000375669 EIF4G2P78344 907 aaKnown RBP eCLIP24.54■■□□□ 1.521e-6■■■■■ 30.5
TUBGCP3-202ENST00000375669 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
TUBGCP3-202ENST00000375669 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
TUBGCP3-202ENST00000375669 POLR3GLQ9BT43 218 aa24.51■■□□□ 1.51
TUBGCP3-202ENST00000375669 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
TUBGCP3-202ENST00000375669 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
TUBGCP3-202ENST00000375669 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
TUBGCP3-202ENST00000375669 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
TUBGCP3-202ENST00000375669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.514e-17■■■■■ 27.2
TUBGCP3-202ENST00000375669 NCOA2Q15596 1464 aa24.45■■□□□ 1.5
TUBGCP3-202ENST00000375669 IPO9Q96P70 1041 aaKnown RBP24.43■■□□□ 1.5
TUBGCP3-202ENST00000375669 FMN1Q68DA7 1419 aa24.42■■□□□ 1.5
TUBGCP3-202ENST00000375669 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
TUBGCP3-202ENST00000375669 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
TUBGCP3-202ENST00000375669 IL27Q8NEV9 243 aa24.41■■□□□ 1.5
TUBGCP3-202ENST00000375669 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
TUBGCP3-202ENST00000375669 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
TUBGCP3-202ENST00000375669 ANP32AP39687 249 aaKnown RBP24.41■■□□□ 1.5
TUBGCP3-202ENST00000375669 MYOM3Q5VTT5 1437 aa24.4■■□□□ 1.5
TUBGCP3-202ENST00000375669 SNAPC4Q5SXM2 1469 aa24.4■■□□□ 1.5
TUBGCP3-202ENST00000375669 DENND4BO75064 1496 aaPredicted RBP24.39■■□□□ 1.49
TUBGCP3-202ENST00000375669 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
TUBGCP3-202ENST00000375669 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
TUBGCP3-202ENST00000375669 CCDC136Q96JN2 1154 aa24.37■■□□□ 1.49
TUBGCP3-202ENST00000375669 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
TUBGCP3-202ENST00000375669 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
TUBGCP3-202ENST00000375669 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
TUBGCP3-202ENST00000375669 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
TUBGCP3-202ENST00000375669 KDM6BO15054 1643 aa24.33■■□□□ 1.49
TUBGCP3-202ENST00000375669 NESP48681 1621 aa24.33■■□□□ 1.49
TUBGCP3-202ENST00000375669 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
TUBGCP3-202ENST00000375669 KIF7Q2M1P5 1343 aa24.32■■□□□ 1.48
TUBGCP3-202ENST00000375669 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
TUBGCP3-202ENST00000375669 RTN4Q9NQC3 1192 aaKnown RBP24.31■■□□□ 1.48
TUBGCP3-202ENST00000375669 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms