RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
TUBGCP3-202ENST00000375669 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
TUBGCP3-202ENST00000375669 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.5
TUBGCP3-202ENST00000375669 HRCP23327 699 aa30.29■■■□□ 2.44
TUBGCP3-202ENST00000375669 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
TUBGCP3-202ENST00000375669 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
TUBGCP3-202ENST00000375669 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
TUBGCP3-202ENST00000375669 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
TUBGCP3-202ENST00000375669 PPARGC1BQ86YN6 1023 aaKnown RBP29.68■■■□□ 2.34
TUBGCP3-202ENST00000375669 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
TUBGCP3-202ENST00000375669 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
TUBGCP3-202ENST00000375669 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
TUBGCP3-202ENST00000375669 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
TUBGCP3-202ENST00000375669 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
TUBGCP3-202ENST00000375669 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
TUBGCP3-202ENST00000375669 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
TUBGCP3-202ENST00000375669 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
TUBGCP3-202ENST00000375669 FAM9AQ8IZU1 332 aaPredicted RBP28.49■■■□□ 2.15
TUBGCP3-202ENST00000375669 ZEB1P37275 1124 aaPredicted RBP28.49■■■□□ 2.15
TUBGCP3-202ENST00000375669 MYT1Q01538 1121 aa28.43■■■□□ 2.14
TUBGCP3-202ENST00000375669 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
TUBGCP3-202ENST00000375669 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
TUBGCP3-202ENST00000375669 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
TUBGCP3-202ENST00000375669 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
TUBGCP3-202ENST00000375669 ABCC9O60706 1549 aa27.84■■■□□ 2.05
TUBGCP3-202ENST00000375669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.83■■■□□ 2.05
TUBGCP3-202ENST00000375669 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
TUBGCP3-202ENST00000375669 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
TUBGCP3-202ENST00000375669 TTBK1Q5TCY1 1321 aaPredicted RBP27.76■■■□□ 2.03
TUBGCP3-202ENST00000375669 GTF3C3Q9Y5Q9 886 aa27.72■■■□□ 2.03
TUBGCP3-202ENST00000375669 CCER1Q8TC90 406 aaPredicted RBP27.63■■■□□ 2.01
TUBGCP3-202ENST00000375669 CENPBP07199 599 aaPredicted RBP27.62■■■□□ 2.01
TUBGCP3-202ENST00000375669 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
TUBGCP3-202ENST00000375669 DIEXFQ68CQ4 756 aaKnown RBP27.41■■□□□ 1.98
TUBGCP3-202ENST00000375669 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
TUBGCP3-202ENST00000375669 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
TUBGCP3-202ENST00000375669 WIZO95785 1651 aa27.15■■□□□ 1.94
TUBGCP3-202ENST00000375669 ABCC8Q09428 1581 aa26.95■■□□□ 1.91
TUBGCP3-202ENST00000375669 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
TUBGCP3-202ENST00000375669 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
TUBGCP3-202ENST00000375669 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
TUBGCP3-202ENST00000375669 ZNF316A6NFI3 1004 aaPredicted RBP26.88■■□□□ 1.89
TUBGCP3-202ENST00000375669 SOGA1O94964 1423 aa26.87■■□□□ 1.89
TUBGCP3-202ENST00000375669 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
TUBGCP3-202ENST00000375669 MIER1Q8N108 512 aa26.79■■□□□ 1.88
TUBGCP3-202ENST00000375669 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
TUBGCP3-202ENST00000375669 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
TUBGCP3-202ENST00000375669 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
TUBGCP3-202ENST00000375669 BAZ1AQ9NRL2 1556 aaPredicted RBP26.68■■□□□ 1.86
TUBGCP3-202ENST00000375669 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
TUBGCP3-202ENST00000375669 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
TUBGCP3-202ENST00000375669 NACADO15069 1562 aa26.64■■□□□ 1.85
TUBGCP3-202ENST00000375669 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
TUBGCP3-202ENST00000375669 BCL11AQ9H165 835 aa26.47■■□□□ 1.83
TUBGCP3-202ENST00000375669 ANP32EQ9BTT0 268 aa26.46■■□□□ 1.83
TUBGCP3-202ENST00000375669 CLSPNQ9HAW4 1339 aa26.43■■□□□ 1.82
TUBGCP3-202ENST00000375669 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
TUBGCP3-202ENST00000375669 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
TUBGCP3-202ENST00000375669 SUPT16HQ9Y5B9 1047 aaKnown RBP26.38■■□□□ 1.81
TUBGCP3-202ENST00000375669 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
TUBGCP3-202ENST00000375669 GOLGA3Q08378 1498 aa26.33■■□□□ 1.81
TUBGCP3-202ENST00000375669 TSHZ2Q9NRE2 1034 aa26.31■■□□□ 1.8
TUBGCP3-202ENST00000375669 APLP2Q06481 763 aa26.3■■□□□ 1.8
TUBGCP3-202ENST00000375669 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
TUBGCP3-202ENST00000375669 CLIP1P30622 1438 aa26.24■■□□□ 1.79
TUBGCP3-202ENST00000375669 EEA1Q15075 1411 aa26.22■■□□□ 1.79
TUBGCP3-202ENST00000375669 RAPGEF2Q9Y4G8 1499 aa26.08■■□□□ 1.77
TUBGCP3-202ENST00000375669 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
TUBGCP3-202ENST00000375669 VPS8Q8N3P4 1428 aa26.07■■□□□ 1.76
TUBGCP3-202ENST00000375669 ITGAEP38570 1179 aa26.05■■□□□ 1.76
TUBGCP3-202ENST00000375669 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
TUBGCP3-202ENST00000375669 KANK4Q5T7N3 995 aaPredicted RBP26.02■■□□□ 1.76
TUBGCP3-202ENST00000375669 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
TUBGCP3-202ENST00000375669 DHX57Q6P158 1386 aaKnown RBP25.96■■□□□ 1.75
TUBGCP3-202ENST00000375669 BCANQ96GW7 911 aa25.91■■□□□ 1.74
TUBGCP3-202ENST00000375669 KIF21BO75037 1637 aa25.9■■□□□ 1.74
TUBGCP3-202ENST00000375669 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
TUBGCP3-202ENST00000375669 BAZ1BQ9UIG0 1483 aaKnown RBP25.7■■□□□ 1.71
TUBGCP3-202ENST00000375669 HIRIP3Q9BW71 556 aaPredicted RBP25.7■■□□□ 1.7
TUBGCP3-202ENST00000375669 RBM19Q9Y4C8 960 aaKnown RBP25.68■■□□□ 1.7
TUBGCP3-202ENST00000375669 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
TUBGCP3-202ENST00000375669 DDX10Q13206 875 aaKnown RBP25.65■■□□□ 1.7
TUBGCP3-202ENST00000375669 FKBP8Q14318 412 aa25.63■■□□□ 1.69
TUBGCP3-202ENST00000375669 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
TUBGCP3-202ENST00000375669 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
TUBGCP3-202ENST00000375669 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
TUBGCP3-202ENST00000375669 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
TUBGCP3-202ENST00000375669 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
TUBGCP3-202ENST00000375669 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
TUBGCP3-202ENST00000375669 PRXQ9BXM0 1461 aa25.48■■□□□ 1.67
TUBGCP3-202ENST00000375669 RRBP1Q9P2E9 1410 aaKnown RBP25.47■■□□□ 1.67
TUBGCP3-202ENST00000375669 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
TUBGCP3-202ENST00000375669 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
TUBGCP3-202ENST00000375669 MSH5O43196 834 aa25.45■■□□□ 1.66
TUBGCP3-202ENST00000375669 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
TUBGCP3-202ENST00000375669 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
TUBGCP3-202ENST00000375669 NEFLP07196 543 aa25.43■■□□□ 1.66
TUBGCP3-202ENST00000375669 PRKCSHP14314 528 aaPredicted RBP25.41■■□□□ 1.66
TUBGCP3-202ENST00000375669 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
TUBGCP3-202ENST00000375669 ARHGAP35Q9NRY4 1499 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms