RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
PTPDC1-202ENST00000375360 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
PTPDC1-202ENST00000375360 ACIN1Q9UKV3 1341 aaKnown RBP24.77■■□□□ 1.56
PTPDC1-202ENST00000375360 DAXXQ9UER7 740 aaPredicted RBP24.75■■□□□ 1.55
PTPDC1-202ENST00000375360 CLSPNQ9HAW4 1339 aa24.75■■□□□ 1.55
PTPDC1-202ENST00000375360 RGL3Q3MIN7 710 aa24.73■■□□□ 1.55
PTPDC1-202ENST00000375360 SIN3AQ96ST3 1273 aa24.72■■□□□ 1.55
PTPDC1-202ENST00000375360 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
PTPDC1-202ENST00000375360 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
PTPDC1-202ENST00000375360 FAM9BQ8IZU0 186 aa24.71■■□□□ 1.55
PTPDC1-202ENST00000375360 MIER1Q8N108 512 aa24.71■■□□□ 1.55
PTPDC1-202ENST00000375360 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
PTPDC1-202ENST00000375360 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
PTPDC1-202ENST00000375360 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
PTPDC1-202ENST00000375360 HNRNPUQ00839 825 aaKnown RBP eCLIP24.66■■□□□ 1.54
PTPDC1-202ENST00000375360 SLC24A1O60721 1099 aa24.62■■□□□ 1.53
PTPDC1-202ENST00000375360 CCNB3Q8WWL7 1395 aa24.61■■□□□ 1.53
PTPDC1-202ENST00000375360 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
PTPDC1-202ENST00000375360 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
PTPDC1-202ENST00000375360 BCL11AQ9H165 835 aa24.6■■□□□ 1.53
PTPDC1-202ENST00000375360 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.52
PTPDC1-202ENST00000375360 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
PTPDC1-202ENST00000375360 TMC1Q8TDI8 760 aa24.51■■□□□ 1.51
PTPDC1-202ENST00000375360 NEFMP07197 916 aa24.49■■□□□ 1.51
PTPDC1-202ENST00000375360 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
PTPDC1-202ENST00000375360 MRS2Q9HD23 443 aa24.49■■□□□ 1.51
PTPDC1-202ENST00000375360 SENP3-EIF4A1A0A087X0R7 540 aa24.47■■□□□ 1.51
PTPDC1-202ENST00000375360 FKBP8Q14318 412 aa24.46■■□□□ 1.51
PTPDC1-202ENST00000375360 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
PTPDC1-202ENST00000375360 FHOD3Q2V2M9 1422 aa24.4■■□□□ 1.5
PTPDC1-202ENST00000375360 FOXD1Q16676 465 aa24.38■■□□□ 1.49
PTPDC1-202ENST00000375360 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
PTPDC1-202ENST00000375360 CARD11Q9BXL7 1154 aa24.33■■□□□ 1.49
PTPDC1-202ENST00000375360 JPH4Q96JJ6 628 aa24.33■■□□□ 1.49
PTPDC1-202ENST00000375360 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
PTPDC1-202ENST00000375360 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
PTPDC1-202ENST00000375360 FMN1Q68DA7 1419 aa24.27■■□□□ 1.48
PTPDC1-202ENST00000375360 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
PTPDC1-202ENST00000375360 PLEKHG5O94827 1062 aa24.26■■□□□ 1.47
PTPDC1-202ENST00000375360 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
PTPDC1-202ENST00000375360 IRX6P78412 446 aaPredicted RBP24.26■■□□□ 1.47
PTPDC1-202ENST00000375360 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
PTPDC1-202ENST00000375360 DCAF11Q8TEB1 546 aa24.24■■□□□ 1.47
PTPDC1-202ENST00000375360 ZBTB47Q9UFB7 747 aaPredicted RBP24.24■■□□□ 1.47
PTPDC1-202ENST00000375360 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
PTPDC1-202ENST00000375360 IGF1RP08069 1367 aa24.23■■□□□ 1.47
PTPDC1-202ENST00000375360 WDR43Q15061 677 aaKnown RBP eCLIP24.22■■□□□ 1.47
PTPDC1-202ENST00000375360 MLECQ14165 292 aa24.2■■□□□ 1.47
PTPDC1-202ENST00000375360 RAB3GAP2Q9H2M9 1393 aa24.2■■□□□ 1.46
PTPDC1-202ENST00000375360 PKD2Q13563 968 aa24.2■■□□□ 1.46
PTPDC1-202ENST00000375360 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
PTPDC1-202ENST00000375360 GGT6Q6P531 493 aa24.18■■□□□ 1.46
PTPDC1-202ENST00000375360 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.466e-7■■■■□ 23.7
PTPDC1-202ENST00000375360 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
PTPDC1-202ENST00000375360 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PTPDC1-202ENST00000375360 MPHOSPH9Q99550 1183 aa24.11■■□□□ 1.45
PTPDC1-202ENST00000375360 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
PTPDC1-202ENST00000375360 EFCAB2Q5VUJ9 269 aa24.09■■□□□ 1.45
PTPDC1-202ENST00000375360 NPM2Q86SE8 214 aaKnown RBP24.08■■□□□ 1.44
PTPDC1-202ENST00000375360 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.44
PTPDC1-202ENST00000375360 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
PTPDC1-202ENST00000375360 NESP48681 1621 aa24.05■■□□□ 1.44
PTPDC1-202ENST00000375360 NUP155O75694 1391 aa24.04■■□□□ 1.44
PTPDC1-202ENST00000375360 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
PTPDC1-202ENST00000375360 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.44
PTPDC1-202ENST00000375360 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
PTPDC1-202ENST00000375360 CCDC136Q96JN2 1154 aa24.03■■□□□ 1.44
PTPDC1-202ENST00000375360 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.43
PTPDC1-202ENST00000375360 TNNT2P45379 298 aaPredicted RBP24.01■■□□□ 1.43
PTPDC1-202ENST00000375360 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
PTPDC1-202ENST00000375360 TIMELESSQ9UNS1 1208 aa24■■□□□ 1.43
PTPDC1-202ENST00000375360 HSPA5P11021 654 aaKnown RBP23.99■■□□□ 1.43
PTPDC1-202ENST00000375360 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTPDC1-202ENST00000375360 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
PTPDC1-202ENST00000375360 POGKQ9P215 609 aa23.98■■□□□ 1.43
PTPDC1-202ENST00000375360 CDCA8Q53HL2 280 aa23.96■■□□□ 1.43
PTPDC1-202ENST00000375360 KIF3BO15066 747 aa23.96■■□□□ 1.43
PTPDC1-202ENST00000375360 NEUROD2Q15784 382 aa23.94■■□□□ 1.42
PTPDC1-202ENST00000375360 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
PTPDC1-202ENST00000375360 CFTRP13569 1480 aa23.94■■□□□ 1.42
PTPDC1-202ENST00000375360 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
PTPDC1-202ENST00000375360 PTPRGP23470 1445 aa23.92■■□□□ 1.42
PTPDC1-202ENST00000375360 KANK1Q14678 1352 aa23.91■■□□□ 1.42
PTPDC1-202ENST00000375360 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
PTPDC1-202ENST00000375360 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.42
PTPDC1-202ENST00000375360 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
PTPDC1-202ENST00000375360 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
PTPDC1-202ENST00000375360 ANP32AP39687 249 aaKnown RBP23.86■■□□□ 1.41
PTPDC1-202ENST00000375360 STK26Q9P289 416 aa23.86■■□□□ 1.41
PTPDC1-202ENST00000375360 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
PTPDC1-202ENST00000375360 ZNF644Q9H582 1327 aaPredicted RBP23.85■■□□□ 1.41
PTPDC1-202ENST00000375360 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.85■■□□□ 1.41
PTPDC1-202ENST00000375360 TMF1P82094 1093 aa23.84■■□□□ 1.41
PTPDC1-202ENST00000375360 MYT1Q01538 1121 aa23.84■■□□□ 1.41
PTPDC1-202ENST00000375360 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
PTPDC1-202ENST00000375360 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
PTPDC1-202ENST00000375360 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
PTPDC1-202ENST00000375360 CFAP53Q96M91 514 aa23.8■■□□□ 1.4
PTPDC1-202ENST00000375360 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
PTPDC1-202ENST00000375360 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms