RNA–Protein interactions for RNA: ENST00000374930.7

NUP35-202, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-202ENST00000374930 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
NUP35-202ENST00000374930 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
NUP35-202ENST00000374930 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
NUP35-202ENST00000374930 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
NUP35-202ENST00000374930 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
NUP35-202ENST00000374930 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
NUP35-202ENST00000374930 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
NUP35-202ENST00000374930 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
NUP35-202ENST00000374930 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
NUP35-202ENST00000374930 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
NUP35-202ENST00000374930 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
NUP35-202ENST00000374930 GOLGA3Q08378 1498 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 SOGA1O94964 1423 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 KIF21BO75037 1637 aa12.19□□□□□ -0.46
NUP35-202ENST00000374930 CUX1P39880 1505 aa12.17□□□□□ -0.46
NUP35-202ENST00000374930 FANCD2Q9BXW9 1451 aa12.17□□□□□ -0.46
NUP35-202ENST00000374930 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
NUP35-202ENST00000374930 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
NUP35-202ENST00000374930 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
NUP35-202ENST00000374930 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
NUP35-202ENST00000374930 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
NUP35-202ENST00000374930 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
NUP35-202ENST00000374930 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
NUP35-202ENST00000374930 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
NUP35-202ENST00000374930 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
NUP35-202ENST00000374930 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
NUP35-202ENST00000374930 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
NUP35-202ENST00000374930 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
NUP35-202ENST00000374930 IGF1RP08069 1367 aa12.02□□□□□ -0.49
NUP35-202ENST00000374930 CUX2O14529 1486 aa12.01□□□□□ -0.49
NUP35-202ENST00000374930 NESP48681 1621 aa11.98□□□□□ -0.49
NUP35-202ENST00000374930 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
NUP35-202ENST00000374930 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CLIP1P30622 1438 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
NUP35-202ENST00000374930 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CUL7Q14999 1698 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
NUP35-202ENST00000374930 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
NUP35-202ENST00000374930 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
NUP35-202ENST00000374930 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
NUP35-202ENST00000374930 MIER1Q8N108 512 aa11.89□□□□□ -0.51
NUP35-202ENST00000374930 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
NUP35-202ENST00000374930 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
NUP35-202ENST00000374930 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 WDR62O43379 1518 aa11.86□□□□□ -0.51
NUP35-202ENST00000374930 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
NUP35-202ENST00000374930 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
NUP35-202ENST00000374930 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
NUP35-202ENST00000374930 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
NUP35-202ENST00000374930 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
NUP35-202ENST00000374930 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
NUP35-202ENST00000374930 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
NUP35-202ENST00000374930 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 MAP3K1Q13233 1512 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 PKD2Q13563 968 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 HRCP23327 699 aa11.81□□□□□ -0.52
NUP35-202ENST00000374930 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
NUP35-202ENST00000374930 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
NUP35-202ENST00000374930 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
NUP35-202ENST00000374930 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
NUP35-202ENST00000374930 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.534e-6■■■□□ 15.5
NUP35-202ENST00000374930 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
NUP35-202ENST00000374930 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
NUP35-202ENST00000374930 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
NUP35-202ENST00000374930 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
NUP35-202ENST00000374930 CTTNBP2Q8WZ74 1663 aa11.73□□□□□ -0.53
NUP35-202ENST00000374930 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
NUP35-202ENST00000374930 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
NUP35-202ENST00000374930 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
NUP35-202ENST00000374930 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
NUP35-202ENST00000374930 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
NUP35-202ENST00000374930 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
NUP35-202ENST00000374930 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
NUP35-202ENST00000374930 FYCO1Q9BQS8 1478 aa11.68□□□□□ -0.54
NUP35-202ENST00000374930 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
NUP35-202ENST00000374930 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
NUP35-202ENST00000374930 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
NUP35-202ENST00000374930 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
NUP35-202ENST00000374930 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
NUP35-202ENST00000374930 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
NUP35-202ENST00000374930 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
NUP35-202ENST00000374930 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
NUP35-202ENST00000374930 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
NUP35-202ENST00000374930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
NUP35-202ENST00000374930 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
NUP35-202ENST00000374930 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
NUP35-202ENST00000374930 NUBP1P53384 320 aa11.61□□□□□ -0.55
NUP35-202ENST00000374930 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 TIAM1Q13009 1591 aa11.6□□□□□ -0.55
NUP35-202ENST00000374930 CHMP7Q8WUX9 453 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms