RNA–Protein interactions for RNA: ENST00000374704.7

CCNY-203, Transcript of cyclin Y, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCNY, Length 3,960 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-203ENST00000374704 CUX2O14529 1486 aa18.46■□□□□ 0.55
CCNY-203ENST00000374704 FOXD1Q16676 465 aa18.46■□□□□ 0.55
CCNY-203ENST00000374704 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
CCNY-203ENST00000374704 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
CCNY-203ENST00000374704 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
CCNY-203ENST00000374704 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
CCNY-203ENST00000374704 CLSPNQ9HAW4 1339 aa18.38■□□□□ 0.53
CCNY-203ENST00000374704 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
CCNY-203ENST00000374704 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
CCNY-203ENST00000374704 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
CCNY-203ENST00000374704 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
CCNY-203ENST00000374704 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
CCNY-203ENST00000374704 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■■□ 23.6
CCNY-203ENST00000374704 KIF21BO75037 1637 aa18.3■□□□□ 0.52
CCNY-203ENST00000374704 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
CCNY-203ENST00000374704 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
CCNY-203ENST00000374704 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
CCNY-203ENST00000374704 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.51
CCNY-203ENST00000374704 NBR1Q14596 966 aa18.25■□□□□ 0.51
CCNY-203ENST00000374704 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
CCNY-203ENST00000374704 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
CCNY-203ENST00000374704 ANP32EQ9BTT0 268 aa18.24■□□□□ 0.51
CCNY-203ENST00000374704 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
CCNY-203ENST00000374704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCNY-203ENST00000374704 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
CCNY-203ENST00000374704 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
CCNY-203ENST00000374704 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
CCNY-203ENST00000374704 IGF1RP08069 1367 aa18.17■□□□□ 0.5
CCNY-203ENST00000374704 RGL3Q3MIN7 710 aa18.17■□□□□ 0.5
CCNY-203ENST00000374704 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
CCNY-203ENST00000374704 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
CCNY-203ENST00000374704 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
CCNY-203ENST00000374704 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
CCNY-203ENST00000374704 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
CCNY-203ENST00000374704 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
CCNY-203ENST00000374704 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
CCNY-203ENST00000374704 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
CCNY-203ENST00000374704 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
CCNY-203ENST00000374704 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
CCNY-203ENST00000374704 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
CCNY-203ENST00000374704 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
CCNY-203ENST00000374704 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
CCNY-203ENST00000374704 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
CCNY-203ENST00000374704 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
CCNY-203ENST00000374704 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
CCNY-203ENST00000374704 PRXQ9BXM0 1461 aa18■□□□□ 0.47
CCNY-203ENST00000374704 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
CCNY-203ENST00000374704 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
CCNY-203ENST00000374704 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
CCNY-203ENST00000374704 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
CCNY-203ENST00000374704 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
CCNY-203ENST00000374704 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.46
CCNY-203ENST00000374704 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
CCNY-203ENST00000374704 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
CCNY-203ENST00000374704 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
CCNY-203ENST00000374704 CUX1P39880 1505 aa17.94■□□□□ 0.46
CCNY-203ENST00000374704 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
CCNY-203ENST00000374704 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
CCNY-203ENST00000374704 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
CCNY-203ENST00000374704 PKD2Q13563 968 aa17.93■□□□□ 0.46
CCNY-203ENST00000374704 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
CCNY-203ENST00000374704 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
CCNY-203ENST00000374704 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
CCNY-203ENST00000374704 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
CCNY-203ENST00000374704 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
CCNY-203ENST00000374704 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CCNY-203ENST00000374704 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
CCNY-203ENST00000374704 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
CCNY-203ENST00000374704 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
CCNY-203ENST00000374704 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
CCNY-203ENST00000374704 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
CCNY-203ENST00000374704 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
CCNY-203ENST00000374704 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.45
CCNY-203ENST00000374704 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
CCNY-203ENST00000374704 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
CCNY-203ENST00000374704 NESP48681 1621 aa17.81■□□□□ 0.44
CCNY-203ENST00000374704 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
CCNY-203ENST00000374704 CFTRP13569 1480 aa17.79■□□□□ 0.44
CCNY-203ENST00000374704 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
CCNY-203ENST00000374704 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
CCNY-203ENST00000374704 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.43
CCNY-203ENST00000374704 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.437e-7■■■■□ 22.6
CCNY-203ENST00000374704 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
CCNY-203ENST00000374704 ARXQ96QS3 562 aa17.75■□□□□ 0.43
CCNY-203ENST00000374704 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
CCNY-203ENST00000374704 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
CCNY-203ENST00000374704 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
CCNY-203ENST00000374704 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
CCNY-203ENST00000374704 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCNY-203ENST00000374704 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
CCNY-203ENST00000374704 NUP155O75694 1391 aa17.72■□□□□ 0.43
CCNY-203ENST00000374704 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
CCNY-203ENST00000374704 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
CCNY-203ENST00000374704 PLIN1O60240 522 aa17.7■□□□□ 0.42
CCNY-203ENST00000374704 RGS3P49796 1198 aa17.69■□□□□ 0.42
CCNY-203ENST00000374704 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
CCNY-203ENST00000374704 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
CCNY-203ENST00000374704 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
CCNY-203ENST00000374704 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.428e-7■■■■■ 33.9
CCNY-203ENST00000374704 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms