RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
LDLRAP1-201ENST00000374338 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
LDLRAP1-201ENST00000374338 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
LDLRAP1-201ENST00000374338 DHX57Q6P158 1386 aaKnown RBP25.01■■□□□ 1.59
LDLRAP1-201ENST00000374338 CCNB3Q8WWL7 1395 aa24.95■■□□□ 1.58
LDLRAP1-201ENST00000374338 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
LDLRAP1-201ENST00000374338 FHOD3Q2V2M9 1422 aa24.93■■□□□ 1.58
LDLRAP1-201ENST00000374338 BCANQ96GW7 911 aa24.91■■□□□ 1.58
LDLRAP1-201ENST00000374338 ARID3CA6NKF2 412 aa24.89■■□□□ 1.57
LDLRAP1-201ENST00000374338 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
LDLRAP1-201ENST00000374338 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
LDLRAP1-201ENST00000374338 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
LDLRAP1-201ENST00000374338 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
LDLRAP1-201ENST00000374338 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
LDLRAP1-201ENST00000374338 RAB3GAP2Q9H2M9 1393 aa24.81■■□□□ 1.56
LDLRAP1-201ENST00000374338 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
LDLRAP1-201ENST00000374338 HIRIP3Q9BW71 556 aaPredicted RBP24.79■■□□□ 1.56
LDLRAP1-201ENST00000374338 KCNH8Q96L42 1107 aa24.78■■□□□ 1.56
LDLRAP1-201ENST00000374338 TIAM1Q13009 1591 aa24.72■■□□□ 1.55
LDLRAP1-201ENST00000374338 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
LDLRAP1-201ENST00000374338 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
LDLRAP1-201ENST00000374338 PCF11O94913 1555 aaKnown RBP24.69■■□□□ 1.54
LDLRAP1-201ENST00000374338 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
LDLRAP1-201ENST00000374338 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
LDLRAP1-201ENST00000374338 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
LDLRAP1-201ENST00000374338 RBM19Q9Y4C8 960 aaKnown RBP24.63■■□□□ 1.53
LDLRAP1-201ENST00000374338 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
LDLRAP1-201ENST00000374338 SETD5Q9C0A6 1442 aa24.58■■□□□ 1.53
LDLRAP1-201ENST00000374338 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
LDLRAP1-201ENST00000374338 FKBP8Q14318 412 aa24.56■■□□□ 1.52
LDLRAP1-201ENST00000374338 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
LDLRAP1-201ENST00000374338 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
LDLRAP1-201ENST00000374338 MAPKBP1O60336 1514 aa24.52■■□□□ 1.52
LDLRAP1-201ENST00000374338 DDX10Q13206 875 aaKnown RBP24.51■■□□□ 1.51
LDLRAP1-201ENST00000374338 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.511e-6■■■■■ 43.1
LDLRAP1-201ENST00000374338 MSH5O43196 834 aa24.49■■□□□ 1.51
LDLRAP1-201ENST00000374338 RRP7BPQ9NSQ0 103 aa24.47■■□□□ 1.51
LDLRAP1-201ENST00000374338 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
LDLRAP1-201ENST00000374338 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
LDLRAP1-201ENST00000374338 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
LDLRAP1-201ENST00000374338 PTPRKQ15262 1439 aa24.41■■□□□ 1.5
LDLRAP1-201ENST00000374338 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
LDLRAP1-201ENST00000374338 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
LDLRAP1-201ENST00000374338 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.49
LDLRAP1-201ENST00000374338 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
LDLRAP1-201ENST00000374338 FMN1Q68DA7 1419 aa24.36■■□□□ 1.49
LDLRAP1-201ENST00000374338 CFAP43Q8NDM7 1665 aa24.35■■□□□ 1.49
LDLRAP1-201ENST00000374338 FBLN2P98095 1184 aa24.35■■□□□ 1.49
LDLRAP1-201ENST00000374338 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
LDLRAP1-201ENST00000374338 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
LDLRAP1-201ENST00000374338 CUL7Q14999 1698 aa24.34■■□□□ 1.49
LDLRAP1-201ENST00000374338 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
LDLRAP1-201ENST00000374338 FOXD1Q16676 465 aa24.33■■□□□ 1.48
LDLRAP1-201ENST00000374338 TRIM52Q96A61 297 aa24.32■■□□□ 1.48
LDLRAP1-201ENST00000374338 EFCAB5A4FU69 1503 aa24.3■■□□□ 1.48
LDLRAP1-201ENST00000374338 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
LDLRAP1-201ENST00000374338 NCOA2Q15596 1464 aa24.28■■□□□ 1.48
LDLRAP1-201ENST00000374338 ANO8Q9HCE9 1232 aaPredicted RBP24.28■■□□□ 1.48
LDLRAP1-201ENST00000374338 ZNF608Q9ULD9 1512 aaPredicted RBP24.27■■□□□ 1.48
LDLRAP1-201ENST00000374338 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
LDLRAP1-201ENST00000374338 PPP1R15AO75807 674 aaPredicted RBP24.25■■□□□ 1.47
LDLRAP1-201ENST00000374338 MAGI3Q5TCQ9 1506 aa24.22■■□□□ 1.47
LDLRAP1-201ENST00000374338 CCDC18Q5T9S5 1454 aa24.22■■□□□ 1.47
LDLRAP1-201ENST00000374338 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
LDLRAP1-201ENST00000374338 TONSLQ96HA7 1378 aa24.2■■□□□ 1.47
LDLRAP1-201ENST00000374338 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
LDLRAP1-201ENST00000374338 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.46
LDLRAP1-201ENST00000374338 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
LDLRAP1-201ENST00000374338 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
LDLRAP1-201ENST00000374338 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
LDLRAP1-201ENST00000374338 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
LDLRAP1-201ENST00000374338 NEFLP07196 543 aa24.17■■□□□ 1.46
LDLRAP1-201ENST00000374338 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
LDLRAP1-201ENST00000374338 SAMD9Q5K651 1589 aa24.15■■□□□ 1.46
LDLRAP1-201ENST00000374338 IRX6P78412 446 aaPredicted RBP24.13■■□□□ 1.45
LDLRAP1-201ENST00000374338 NAIPQ13075 1403 aa24.13■■□□□ 1.45
LDLRAP1-201ENST00000374338 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
LDLRAP1-201ENST00000374338 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
LDLRAP1-201ENST00000374338 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
LDLRAP1-201ENST00000374338 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
LDLRAP1-201ENST00000374338 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
LDLRAP1-201ENST00000374338 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
LDLRAP1-201ENST00000374338 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
LDLRAP1-201ENST00000374338 EPRSP07814 1512 aaKnown RBP24.04■■□□□ 1.44
LDLRAP1-201ENST00000374338 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
LDLRAP1-201ENST00000374338 THOC2Q8NI27 1593 aaKnown RBP24.02■■□□□ 1.44
LDLRAP1-201ENST00000374338 SUPT6HQ7KZ85 1726 aaKnown RBP24.02■■□□□ 1.44
LDLRAP1-201ENST00000374338 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
LDLRAP1-201ENST00000374338 KDM6BO15054 1643 aa24.01■■□□□ 1.43
LDLRAP1-201ENST00000374338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.43
LDLRAP1-201ENST00000374338 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
LDLRAP1-201ENST00000374338 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
LDLRAP1-201ENST00000374338 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
LDLRAP1-201ENST00000374338 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
LDLRAP1-201ENST00000374338 ANP32CO43423 234 aa23.98■■□□□ 1.43
LDLRAP1-201ENST00000374338 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
LDLRAP1-201ENST00000374338 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
LDLRAP1-201ENST00000374338 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
LDLRAP1-201ENST00000374338 HSPA5P11021 654 aaKnown RBP23.93■■□□□ 1.42
LDLRAP1-201ENST00000374338 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms