RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
PTBP3-205ENST00000374257 EFCAB2Q5VUJ9 269 aa11.74□□□□□ -0.53
PTBP3-205ENST00000374257 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
PTBP3-205ENST00000374257 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
PTBP3-205ENST00000374257 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
PTBP3-205ENST00000374257 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
PTBP3-205ENST00000374257 NESP48681 1621 aa11.72□□□□□ -0.53
PTBP3-205ENST00000374257 PTPRGP23470 1445 aa11.71□□□□□ -0.53
PTBP3-205ENST00000374257 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.54
PTBP3-205ENST00000374257 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
PTBP3-205ENST00000374257 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
PTBP3-205ENST00000374257 GAPVD1Q14C86 1478 aa11.68□□□□□ -0.54
PTBP3-205ENST00000374257 CFTRP13569 1480 aa11.67□□□□□ -0.54
PTBP3-205ENST00000374257 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
PTBP3-205ENST00000374257 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
PTBP3-205ENST00000374257 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■□□□□ 10.9
PTBP3-205ENST00000374257 FGD5Q6ZNL6 1462 aa11.67□□□□□ -0.54
PTBP3-205ENST00000374257 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
PTBP3-205ENST00000374257 IFT140Q96RY7 1462 aa11.66□□□□□ -0.54
PTBP3-205ENST00000374257 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
PTBP3-205ENST00000374257 RAD54L2Q9Y4B4 1467 aa11.64□□□□□ -0.55
PTBP3-205ENST00000374257 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
PTBP3-205ENST00000374257 FMN1Q68DA7 1419 aa11.63□□□□□ -0.55
PTBP3-205ENST00000374257 NEFMP07197 916 aa11.63□□□□□ -0.55
PTBP3-205ENST00000374257 GGT6Q6P531 493 aa11.63□□□□□ -0.55
PTBP3-205ENST00000374257 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
PTBP3-205ENST00000374257 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
PTBP3-205ENST00000374257 KANK1Q14678 1352 aa11.61□□□□□ -0.55
PTBP3-205ENST00000374257 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
PTBP3-205ENST00000374257 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
PTBP3-205ENST00000374257 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
PTBP3-205ENST00000374257 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
PTBP3-205ENST00000374257 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
PTBP3-205ENST00000374257 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
PTBP3-205ENST00000374257 NEFLP07196 543 aa11.55□□□□□ -0.56
PTBP3-205ENST00000374257 IGF1RP08069 1367 aa11.54□□□□□ -0.56
PTBP3-205ENST00000374257 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
PTBP3-205ENST00000374257 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
PTBP3-205ENST00000374257 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
PTBP3-205ENST00000374257 RGL3Q3MIN7 710 aa11.52□□□□□ -0.56
PTBP3-205ENST00000374257 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
PTBP3-205ENST00000374257 FHOD3Q2V2M9 1422 aa11.51□□□□□ -0.57
PTBP3-205ENST00000374257 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
PTBP3-205ENST00000374257 KIF3BO15066 747 aa11.49□□□□□ -0.57
PTBP3-205ENST00000374257 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
PTBP3-205ENST00000374257 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
PTBP3-205ENST00000374257 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
PTBP3-205ENST00000374257 POGKQ9P215 609 aa11.46□□□□□ -0.57
PTBP3-205ENST00000374257 CCDC18Q5T9S5 1454 aa11.46□□□□□ -0.58
PTBP3-205ENST00000374257 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
PTBP3-205ENST00000374257 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
PTBP3-205ENST00000374257 A0A0G2JS52 829 aa11.45□□□□□ -0.58
PTBP3-205ENST00000374257 HNRNPMP52272 730 aaKnown RBP eCLIP11.44□□□□□ -0.588e-6■□□□□ 8.6
PTBP3-205ENST00000374257 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
PTBP3-205ENST00000374257 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
PTBP3-205ENST00000374257 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
PTBP3-205ENST00000374257 HRCP23327 699 aa11.43□□□□□ -0.58
PTBP3-205ENST00000374257 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
PTBP3-205ENST00000374257 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
PTBP3-205ENST00000374257 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
PTBP3-205ENST00000374257 ARHGAP35Q9NRY4 1499 aa11.41□□□□□ -0.58
PTBP3-205ENST00000374257 ANP32CO43423 234 aa11.41□□□□□ -0.58
PTBP3-205ENST00000374257 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
PTBP3-205ENST00000374257 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
PTBP3-205ENST00000374257 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
PTBP3-205ENST00000374257 MYT1Q01538 1121 aa11.35□□□□□ -0.59
PTBP3-205ENST00000374257 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
PTBP3-205ENST00000374257 NUP155O75694 1391 aa11.34□□□□□ -0.59
PTBP3-205ENST00000374257 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
PTBP3-205ENST00000374257 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
PTBP3-205ENST00000374257 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
PTBP3-205ENST00000374257 PKD2Q13563 968 aa11.32□□□□□ -0.6
PTBP3-205ENST00000374257 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
PTBP3-205ENST00000374257 CUX1P39880 1505 aa11.31□□□□□ -0.6
PTBP3-205ENST00000374257 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
PTBP3-205ENST00000374257 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
PTBP3-205ENST00000374257 CARD11Q9BXL7 1154 aa11.3□□□□□ -0.6
PTBP3-205ENST00000374257 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
PTBP3-205ENST00000374257 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■■■□□ 14.7
PTBP3-205ENST00000374257 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
PTBP3-205ENST00000374257 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
PTBP3-205ENST00000374257 STK26Q9P289 416 aa11.27□□□□□ -0.61
PTBP3-205ENST00000374257 UACAQ9BZF9 1416 aa11.27□□□□□ -0.61
PTBP3-205ENST00000374257 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
PTBP3-205ENST00000374257 SYNJ1O43426 1573 aa11.26□□□□□ -0.61
PTBP3-205ENST00000374257 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
PTBP3-205ENST00000374257 POGZQ7Z3K3 1410 aa11.25□□□□□ -0.61
PTBP3-205ENST00000374257 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
PTBP3-205ENST00000374257 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
PTBP3-205ENST00000374257 SRPK2P78362 688 aaKnown RBP11.25□□□□□ -0.61
PTBP3-205ENST00000374257 SAFB2Q14151 953 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTBP3-205ENST00000374257 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
PTBP3-205ENST00000374257 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
PTBP3-205ENST00000374257 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
PTBP3-205ENST00000374257 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
PTBP3-205ENST00000374257 CFAP53Q96M91 514 aa11.21□□□□□ -0.61
PTBP3-205ENST00000374257 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
PTBP3-205ENST00000374257 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
PTBP3-205ENST00000374257 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.62
PTBP3-205ENST00000374257 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms