RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
PTBP3-205ENST00000374257 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
PTBP3-205ENST00000374257 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
PTBP3-205ENST00000374257 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
PTBP3-205ENST00000374257 ABCC9O60706 1549 aa13.99□□□□□ -0.17
PTBP3-205ENST00000374257 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
PTBP3-205ENST00000374257 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTBP3-205ENST00000374257 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
PTBP3-205ENST00000374257 APLP2Q06481 763 aa13.34□□□□□ -0.27
PTBP3-205ENST00000374257 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
PTBP3-205ENST00000374257 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
PTBP3-205ENST00000374257 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
PTBP3-205ENST00000374257 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
PTBP3-205ENST00000374257 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
PTBP3-205ENST00000374257 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
PTBP3-205ENST00000374257 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
PTBP3-205ENST00000374257 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
PTBP3-205ENST00000374257 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
PTBP3-205ENST00000374257 NACADO15069 1562 aa12.95□□□□□ -0.34
PTBP3-205ENST00000374257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
PTBP3-205ENST00000374257 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
PTBP3-205ENST00000374257 FBLN2P98095 1184 aa12.93□□□□□ -0.34
PTBP3-205ENST00000374257 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
PTBP3-205ENST00000374257 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTBP3-205ENST00000374257 ERCC6Q03468 1493 aa12.6□□□□□ -0.39
PTBP3-205ENST00000374257 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
PTBP3-205ENST00000374257 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
PTBP3-205ENST00000374257 CHIC1Q5VXU3 224 aa12.55□□□□□ -0.4
PTBP3-205ENST00000374257 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
PTBP3-205ENST00000374257 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.42
PTBP3-205ENST00000374257 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
PTBP3-205ENST00000374257 ITGAEP38570 1179 aa12.42□□□□□ -0.42
PTBP3-205ENST00000374257 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
PTBP3-205ENST00000374257 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
PTBP3-205ENST00000374257 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
PTBP3-205ENST00000374257 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
PTBP3-205ENST00000374257 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
PTBP3-205ENST00000374257 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
PTBP3-205ENST00000374257 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
PTBP3-205ENST00000374257 PPARGC1BQ86YN6 1023 aaKnown RBP12.36□□□□□ -0.43
PTBP3-205ENST00000374257 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
PTBP3-205ENST00000374257 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
PTBP3-205ENST00000374257 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
PTBP3-205ENST00000374257 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PTBP3-205ENST00000374257 CCER1Q8TC90 406 aaPredicted RBP12.28□□□□□ -0.44
PTBP3-205ENST00000374257 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
PTBP3-205ENST00000374257 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
PTBP3-205ENST00000374257 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
PTBP3-205ENST00000374257 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
PTBP3-205ENST00000374257 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
PTBP3-205ENST00000374257 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
PTBP3-205ENST00000374257 BCANQ96GW7 911 aa12.14□□□□□ -0.47
PTBP3-205ENST00000374257 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
PTBP3-205ENST00000374257 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
PTBP3-205ENST00000374257 KIF27Q86VH2 1401 aa12.13□□□□□ -0.47
PTBP3-205ENST00000374257 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
PTBP3-205ENST00000374257 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PTBP3-205ENST00000374257 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
PTBP3-205ENST00000374257 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
PTBP3-205ENST00000374257 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
PTBP3-205ENST00000374257 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
PTBP3-205ENST00000374257 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
PTBP3-205ENST00000374257 POLR3GLQ9BT43 218 aa12.04□□□□□ -0.48
PTBP3-205ENST00000374257 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
PTBP3-205ENST00000374257 TSPY4P0CV99 314 aa12.04□□□□□ -0.48
PTBP3-205ENST00000374257 TSPY10P0CW01 314 aa12.04□□□□□ -0.48
PTBP3-205ENST00000374257 SOGA1O94964 1423 aa12.03□□□□□ -0.48
PTBP3-205ENST00000374257 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
PTBP3-205ENST00000374257 TDRD9Q8NDG6 1382 aaKnown RBP12.03□□□□□ -0.48
PTBP3-205ENST00000374257 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.48
PTBP3-205ENST00000374257 EEA1Q15075 1411 aa12.02□□□□□ -0.48
PTBP3-205ENST00000374257 CUX2O14529 1486 aa12.02□□□□□ -0.49
PTBP3-205ENST00000374257 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
PTBP3-205ENST00000374257 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
PTBP3-205ENST00000374257 NCAPD3P42695 1498 aa12□□□□□ -0.49
PTBP3-205ENST00000374257 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
PTBP3-205ENST00000374257 MTUS2Q5JR59 1369 aa11.99□□□□□ -0.49
PTBP3-205ENST00000374257 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
PTBP3-205ENST00000374257 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.5
PTBP3-205ENST00000374257 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
PTBP3-205ENST00000374257 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
PTBP3-205ENST00000374257 SMARCA4P51532 1647 aa11.95□□□□□ -0.5
PTBP3-205ENST00000374257 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
PTBP3-205ENST00000374257 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
PTBP3-205ENST00000374257 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
PTBP3-205ENST00000374257 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
PTBP3-205ENST00000374257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.515e-8■□□□□ 10.5
PTBP3-205ENST00000374257 CLIP1P30622 1438 aa11.89□□□□□ -0.51
PTBP3-205ENST00000374257 CFDP1Q9UEE9 299 aaPredicted RBP11.87□□□□□ -0.51
PTBP3-205ENST00000374257 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
PTBP3-205ENST00000374257 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
PTBP3-205ENST00000374257 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
PTBP3-205ENST00000374257 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
PTBP3-205ENST00000374257 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
PTBP3-205ENST00000374257 WIZO95785 1651 aa11.82□□□□□ -0.52
PTBP3-205ENST00000374257 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
PTBP3-205ENST00000374257 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
PTBP3-205ENST00000374257 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
PTBP3-205ENST00000374257 MLECQ14165 292 aa11.75□□□□□ -0.53
PTBP3-205ENST00000374257 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms