RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
HDAC8-207ENST00000373573 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
HDAC8-207ENST00000373573 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
HDAC8-207ENST00000373573 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
HDAC8-207ENST00000373573 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
HDAC8-207ENST00000373573 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
HDAC8-207ENST00000373573 MYT1Q01538 1121 aa19.29■□□□□ 0.68
HDAC8-207ENST00000373573 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
HDAC8-207ENST00000373573 RRBP1Q9P2E9 1410 aaKnown RBP19.27■□□□□ 0.67
HDAC8-207ENST00000373573 KANK4Q5T7N3 995 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-207ENST00000373573 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
HDAC8-207ENST00000373573 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
HDAC8-207ENST00000373573 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
HDAC8-207ENST00000373573 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
HDAC8-207ENST00000373573 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
HDAC8-207ENST00000373573 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
HDAC8-207ENST00000373573 IGF1RP08069 1367 aa19.13■□□□□ 0.65
HDAC8-207ENST00000373573 PBRM1Q86U86 1689 aa19.12■□□□□ 0.65
HDAC8-207ENST00000373573 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
HDAC8-207ENST00000373573 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
HDAC8-207ENST00000373573 CUL7Q14999 1698 aa19.1■□□□□ 0.65
HDAC8-207ENST00000373573 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
HDAC8-207ENST00000373573 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
HDAC8-207ENST00000373573 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
HDAC8-207ENST00000373573 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
HDAC8-207ENST00000373573 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
HDAC8-207ENST00000373573 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
HDAC8-207ENST00000373573 MAPKBP1O60336 1514 aa18.99■□□□□ 0.63
HDAC8-207ENST00000373573 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
HDAC8-207ENST00000373573 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
HDAC8-207ENST00000373573 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
HDAC8-207ENST00000373573 ITGAEP38570 1179 aa18.93■□□□□ 0.62
HDAC8-207ENST00000373573 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
HDAC8-207ENST00000373573 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
HDAC8-207ENST00000373573 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
HDAC8-207ENST00000373573 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
HDAC8-207ENST00000373573 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
HDAC8-207ENST00000373573 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
HDAC8-207ENST00000373573 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
HDAC8-207ENST00000373573 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
HDAC8-207ENST00000373573 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
HDAC8-207ENST00000373573 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
HDAC8-207ENST00000373573 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
HDAC8-207ENST00000373573 TIMELESSQ9UNS1 1208 aa18.78■□□□□ 0.6
HDAC8-207ENST00000373573 KCNH8Q96L42 1107 aa18.77■□□□□ 0.6
HDAC8-207ENST00000373573 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
HDAC8-207ENST00000373573 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
HDAC8-207ENST00000373573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.75■□□□□ 0.59
HDAC8-207ENST00000373573 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
HDAC8-207ENST00000373573 SIN3AQ96ST3 1273 aa18.74■□□□□ 0.59
HDAC8-207ENST00000373573 CHD1O14646 1710 aa18.73■□□□□ 0.59
HDAC8-207ENST00000373573 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
HDAC8-207ENST00000373573 CASKIN1Q8WXD9 1431 aa18.71■□□□□ 0.59
HDAC8-207ENST00000373573 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-207ENST00000373573 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
HDAC8-207ENST00000373573 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
HDAC8-207ENST00000373573 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
HDAC8-207ENST00000373573 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
HDAC8-207ENST00000373573 FHOD3Q2V2M9 1422 aa18.69■□□□□ 0.58
HDAC8-207ENST00000373573 NUP160Q12769 1436 aa18.67■□□□□ 0.58
HDAC8-207ENST00000373573 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
HDAC8-207ENST00000373573 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
HDAC8-207ENST00000373573 FBLN2P98095 1184 aa18.66■□□□□ 0.58
HDAC8-207ENST00000373573 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
HDAC8-207ENST00000373573 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
HDAC8-207ENST00000373573 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
HDAC8-207ENST00000373573 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
HDAC8-207ENST00000373573 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
HDAC8-207ENST00000373573 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
HDAC8-207ENST00000373573 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
HDAC8-207ENST00000373573 FKBP8Q14318 412 aa18.56■□□□□ 0.56
HDAC8-207ENST00000373573 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
HDAC8-207ENST00000373573 ANP32CO43423 234 aa18.56■□□□□ 0.56
HDAC8-207ENST00000373573 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
HDAC8-207ENST00000373573 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
HDAC8-207ENST00000373573 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
HDAC8-207ENST00000373573 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
HDAC8-207ENST00000373573 BCANQ96GW7 911 aa18.52■□□□□ 0.56
HDAC8-207ENST00000373573 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
HDAC8-207ENST00000373573 PTPRKQ15262 1439 aa18.51■□□□□ 0.55
HDAC8-207ENST00000373573 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
HDAC8-207ENST00000373573 DISP1Q96F81 1524 aa18.51■□□□□ 0.55
HDAC8-207ENST00000373573 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
HDAC8-207ENST00000373573 LRRIQ1Q96JM4 1722 aa18.49■□□□□ 0.55
HDAC8-207ENST00000373573 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
HDAC8-207ENST00000373573 NEFLP07196 543 aa18.49■□□□□ 0.55
HDAC8-207ENST00000373573 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
HDAC8-207ENST00000373573 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
HDAC8-207ENST00000373573 NAIPQ13075 1403 aa18.47■□□□□ 0.55
HDAC8-207ENST00000373573 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
HDAC8-207ENST00000373573 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
HDAC8-207ENST00000373573 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
HDAC8-207ENST00000373573 KDM5BQ9UGL1 1544 aa18.45■□□□□ 0.54
HDAC8-207ENST00000373573 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
HDAC8-207ENST00000373573 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
HDAC8-207ENST00000373573 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
HDAC8-207ENST00000373573 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
HDAC8-207ENST00000373573 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
HDAC8-207ENST00000373573 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
HDAC8-207ENST00000373573 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms