RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
HDAC8-207ENST00000373573 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
HDAC8-207ENST00000373573 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
HDAC8-207ENST00000373573 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
HDAC8-207ENST00000373573 ABCC9O60706 1549 aa22.69■■□□□ 1.22
HDAC8-207ENST00000373573 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
HDAC8-207ENST00000373573 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
HDAC8-207ENST00000373573 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
HDAC8-207ENST00000373573 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
HDAC8-207ENST00000373573 NACADO15069 1562 aa22.27■■□□□ 1.16
HDAC8-207ENST00000373573 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
HDAC8-207ENST00000373573 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
HDAC8-207ENST00000373573 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
HDAC8-207ENST00000373573 HRCP23327 699 aa21.82■■□□□ 1.08
HDAC8-207ENST00000373573 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
HDAC8-207ENST00000373573 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
HDAC8-207ENST00000373573 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
HDAC8-207ENST00000373573 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
HDAC8-207ENST00000373573 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
HDAC8-207ENST00000373573 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
HDAC8-207ENST00000373573 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
HDAC8-207ENST00000373573 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
HDAC8-207ENST00000373573 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
HDAC8-207ENST00000373573 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
HDAC8-207ENST00000373573 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
HDAC8-207ENST00000373573 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
HDAC8-207ENST00000373573 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
HDAC8-207ENST00000373573 TRIM41Q8WV44 630 aa20.93■□□□□ 0.94
HDAC8-207ENST00000373573 WIZO95785 1651 aa20.87■□□□□ 0.93
HDAC8-207ENST00000373573 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
HDAC8-207ENST00000373573 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
HDAC8-207ENST00000373573 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
HDAC8-207ENST00000373573 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
HDAC8-207ENST00000373573 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
HDAC8-207ENST00000373573 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
HDAC8-207ENST00000373573 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
HDAC8-207ENST00000373573 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.88
HDAC8-207ENST00000373573 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
HDAC8-207ENST00000373573 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
HDAC8-207ENST00000373573 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
HDAC8-207ENST00000373573 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
HDAC8-207ENST00000373573 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
HDAC8-207ENST00000373573 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
HDAC8-207ENST00000373573 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
HDAC8-207ENST00000373573 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
HDAC8-207ENST00000373573 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
HDAC8-207ENST00000373573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
HDAC8-207ENST00000373573 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
HDAC8-207ENST00000373573 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
HDAC8-207ENST00000373573 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
HDAC8-207ENST00000373573 EEA1Q15075 1411 aa20.09■□□□□ 0.81
HDAC8-207ENST00000373573 SOGA1O94964 1423 aa20.07■□□□□ 0.8
HDAC8-207ENST00000373573 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
HDAC8-207ENST00000373573 CFTRP13569 1480 aa20.02■□□□□ 0.8
HDAC8-207ENST00000373573 ACIN1Q9UKV3 1341 aaKnown RBP19.99■□□□□ 0.79
HDAC8-207ENST00000373573 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
HDAC8-207ENST00000373573 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
HDAC8-207ENST00000373573 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
HDAC8-207ENST00000373573 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
HDAC8-207ENST00000373573 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
HDAC8-207ENST00000373573 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
HDAC8-207ENST00000373573 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
HDAC8-207ENST00000373573 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
HDAC8-207ENST00000373573 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
HDAC8-207ENST00000373573 NESP48681 1621 aa19.87■□□□□ 0.77
HDAC8-207ENST00000373573 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-207ENST00000373573 KIF21BO75037 1637 aa19.82■□□□□ 0.76
HDAC8-207ENST00000373573 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
HDAC8-207ENST00000373573 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
HDAC8-207ENST00000373573 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
HDAC8-207ENST00000373573 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
HDAC8-207ENST00000373573 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
HDAC8-207ENST00000373573 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
HDAC8-207ENST00000373573 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
HDAC8-207ENST00000373573 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
HDAC8-207ENST00000373573 CLIP1P30622 1438 aa19.69■□□□□ 0.74
HDAC8-207ENST00000373573 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
HDAC8-207ENST00000373573 CUX1P39880 1505 aa19.69■□□□□ 0.74
HDAC8-207ENST00000373573 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
HDAC8-207ENST00000373573 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
HDAC8-207ENST00000373573 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
HDAC8-207ENST00000373573 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
HDAC8-207ENST00000373573 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.73
HDAC8-207ENST00000373573 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
HDAC8-207ENST00000373573 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
HDAC8-207ENST00000373573 APLP2Q06481 763 aa19.51■□□□□ 0.71
HDAC8-207ENST00000373573 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
HDAC8-207ENST00000373573 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
HDAC8-207ENST00000373573 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
HDAC8-207ENST00000373573 MIER1Q8N108 512 aa19.47■□□□□ 0.71
HDAC8-207ENST00000373573 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
HDAC8-207ENST00000373573 CUX2O14529 1486 aa19.45■□□□□ 0.7
HDAC8-207ENST00000373573 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
HDAC8-207ENST00000373573 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
HDAC8-207ENST00000373573 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
HDAC8-207ENST00000373573 WDR62O43379 1518 aa19.42■□□□□ 0.7
HDAC8-207ENST00000373573 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
HDAC8-207ENST00000373573 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
HDAC8-207ENST00000373573 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
HDAC8-207ENST00000373573 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms