RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 FHAD1B1AJZ9 1412 aa18.63■□□□□ 0.57
TSPAN6-201ENST00000373020 EFCAB5A4FU69 1503 aa18.62■□□□□ 0.57
TSPAN6-201ENST00000373020 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
TSPAN6-201ENST00000373020 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
TSPAN6-201ENST00000373020 CTTNBP2Q8WZ74 1663 aa18.6■□□□□ 0.57
TSPAN6-201ENST00000373020 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
TSPAN6-201ENST00000373020 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
TSPAN6-201ENST00000373020 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
TSPAN6-201ENST00000373020 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSPAN6-201ENST00000373020 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
TSPAN6-201ENST00000373020 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
TSPAN6-201ENST00000373020 CASKIN1Q8WXD9 1431 aa18.5■□□□□ 0.55
TSPAN6-201ENST00000373020 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
TSPAN6-201ENST00000373020 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
TSPAN6-201ENST00000373020 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
TSPAN6-201ENST00000373020 MAPKBP1O60336 1514 aa18.46■□□□□ 0.55
TSPAN6-201ENST00000373020 RAB3GAP2Q9H2M9 1393 aa18.46■□□□□ 0.55
TSPAN6-201ENST00000373020 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
TSPAN6-201ENST00000373020 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
TSPAN6-201ENST00000373020 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
TSPAN6-201ENST00000373020 MIER1Q8N108 512 aa18.42■□□□□ 0.54
TSPAN6-201ENST00000373020 FMN1Q68DA7 1419 aa18.42■□□□□ 0.54
TSPAN6-201ENST00000373020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN6-201ENST00000373020 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
TSPAN6-201ENST00000373020 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
TSPAN6-201ENST00000373020 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
TSPAN6-201ENST00000373020 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
TSPAN6-201ENST00000373020 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
TSPAN6-201ENST00000373020 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
TSPAN6-201ENST00000373020 ITGAEP38570 1179 aa18.35■□□□□ 0.53
TSPAN6-201ENST00000373020 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
TSPAN6-201ENST00000373020 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
TSPAN6-201ENST00000373020 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
TSPAN6-201ENST00000373020 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
TSPAN6-201ENST00000373020 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
TSPAN6-201ENST00000373020 PBRM1Q86U86 1689 aa18.3■□□□□ 0.52
TSPAN6-201ENST00000373020 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
TSPAN6-201ENST00000373020 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
TSPAN6-201ENST00000373020 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
TSPAN6-201ENST00000373020 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
TSPAN6-201ENST00000373020 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
TSPAN6-201ENST00000373020 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
TSPAN6-201ENST00000373020 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
TSPAN6-201ENST00000373020 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
TSPAN6-201ENST00000373020 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
TSPAN6-201ENST00000373020 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
TSPAN6-201ENST00000373020 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
TSPAN6-201ENST00000373020 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
TSPAN6-201ENST00000373020 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
TSPAN6-201ENST00000373020 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
TSPAN6-201ENST00000373020 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
TSPAN6-201ENST00000373020 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
TSPAN6-201ENST00000373020 TIMELESSQ9UNS1 1208 aa18.18■□□□□ 0.5
TSPAN6-201ENST00000373020 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
TSPAN6-201ENST00000373020 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
TSPAN6-201ENST00000373020 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
TSPAN6-201ENST00000373020 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
TSPAN6-201ENST00000373020 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
TSPAN6-201ENST00000373020 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
TSPAN6-201ENST00000373020 WDR62O43379 1518 aa18.12■□□□□ 0.49
TSPAN6-201ENST00000373020 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
TSPAN6-201ENST00000373020 NAIPQ13075 1403 aa18.11■□□□□ 0.49
TSPAN6-201ENST00000373020 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
TSPAN6-201ENST00000373020 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
TSPAN6-201ENST00000373020 GCC2Q8IWJ2 1684 aa18.08■□□□□ 0.49
TSPAN6-201ENST00000373020 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
TSPAN6-201ENST00000373020 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
TSPAN6-201ENST00000373020 PPP1R15AO75807 674 aaPredicted RBP18.03■□□□□ 0.48
TSPAN6-201ENST00000373020 KIAA0556O60303 1618 aa18.02■□□□□ 0.48
TSPAN6-201ENST00000373020 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.48
TSPAN6-201ENST00000373020 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
TSPAN6-201ENST00000373020 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
TSPAN6-201ENST00000373020 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
TSPAN6-201ENST00000373020 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
TSPAN6-201ENST00000373020 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
TSPAN6-201ENST00000373020 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
TSPAN6-201ENST00000373020 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
TSPAN6-201ENST00000373020 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
TSPAN6-201ENST00000373020 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
TSPAN6-201ENST00000373020 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
TSPAN6-201ENST00000373020 KDM6BO15054 1643 aa17.93■□□□□ 0.46
TSPAN6-201ENST00000373020 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
TSPAN6-201ENST00000373020 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
TSPAN6-201ENST00000373020 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
TSPAN6-201ENST00000373020 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
TSPAN6-201ENST00000373020 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
TSPAN6-201ENST00000373020 DAPK1P53355 1430 aa17.85■□□□□ 0.45
TSPAN6-201ENST00000373020 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
TSPAN6-201ENST00000373020 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
TSPAN6-201ENST00000373020 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
TSPAN6-201ENST00000373020 ADCY10Q96PN6 1610 aa17.83■□□□□ 0.44
TSPAN6-201ENST00000373020 ABCC5O15440 1437 aa17.82■□□□□ 0.44
TSPAN6-201ENST00000373020 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
TSPAN6-201ENST00000373020 ITSN2Q9NZM3 1697 aa17.81■□□□□ 0.44
TSPAN6-201ENST00000373020 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
TSPAN6-201ENST00000373020 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
TSPAN6-201ENST00000373020 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
TSPAN6-201ENST00000373020 NUP160Q12769 1436 aa17.79■□□□□ 0.44
TSPAN6-201ENST00000373020 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
TSPAN6-201ENST00000373020 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms