RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
LRP8-204ENST00000371454 MSH5O43196 834 aa27.03■■□□□ 1.92
LRP8-204ENST00000371454 PHLDB1Q86UU1 1377 aa27.02■■□□□ 1.92
LRP8-204ENST00000371454 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
LRP8-204ENST00000371454 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
LRP8-204ENST00000371454 CHIC2Q9UKJ5 165 aa27.01■■□□□ 1.91
LRP8-204ENST00000371454 ARHGAP35Q9NRY4 1499 aa26.99■■□□□ 1.91
LRP8-204ENST00000371454 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
LRP8-204ENST00000371454 CC2D2AQ9P2K1 1620 aa26.97■■□□□ 1.91
LRP8-204ENST00000371454 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
LRP8-204ENST00000371454 POLR3GLQ9BT43 218 aa26.96■■□□□ 1.91
LRP8-204ENST00000371454 MAPKBP1O60336 1514 aa26.95■■□□□ 1.9
LRP8-204ENST00000371454 SETD5Q9C0A6 1442 aa26.94■■□□□ 1.9
LRP8-204ENST00000371454 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
LRP8-204ENST00000371454 FAM9BQ8IZU0 186 aa26.94■■□□□ 1.9
LRP8-204ENST00000371454 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
LRP8-204ENST00000371454 CCDC184Q52MB2 194 aa26.92■■□□□ 1.9
LRP8-204ENST00000371454 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
LRP8-204ENST00000371454 FOXD1Q16676 465 aa26.9■■□□□ 1.9
LRP8-204ENST00000371454 RRP7BPQ9NSQ0 103 aa26.87■■□□□ 1.89
LRP8-204ENST00000371454 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
LRP8-204ENST00000371454 B4GALNT3Q6L9W6 998 aa26.86■■□□□ 1.89
LRP8-204ENST00000371454 CUX2O14529 1486 aa26.85■■□□□ 1.89
LRP8-204ENST00000371454 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
LRP8-204ENST00000371454 CUX1P39880 1505 aa26.83■■□□□ 1.89
LRP8-204ENST00000371454 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
LRP8-204ENST00000371454 NBR1Q14596 966 aa26.77■■□□□ 1.88
LRP8-204ENST00000371454 CDK11AQ9UQ88 783 aaPredicted RBP26.77■■□□□ 1.88
LRP8-204ENST00000371454 IGF1RP08069 1367 aa26.74■■□□□ 1.87
LRP8-204ENST00000371454 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
LRP8-204ENST00000371454 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
LRP8-204ENST00000371454 HSPA5P11021 654 aaKnown RBP26.66■■□□□ 1.86
LRP8-204ENST00000371454 LRRC9Q6ZRR7 1453 aa26.64■■□□□ 1.86
LRP8-204ENST00000371454 ERICH3Q5RHP9 1530 aa26.64■■□□□ 1.85
LRP8-204ENST00000371454 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
LRP8-204ENST00000371454 CCER2I3L3R5 266 aa26.62■■□□□ 1.85
LRP8-204ENST00000371454 NESP48681 1621 aa26.6■■□□□ 1.85
LRP8-204ENST00000371454 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
LRP8-204ENST00000371454 C11orf95C9JLR9 678 aaPredicted RBP26.59■■□□□ 1.85
LRP8-204ENST00000371454 WASHC2AQ641Q2 1341 aa26.58■■□□□ 1.85
LRP8-204ENST00000371454 SALL2Q9Y467 1007 aaPredicted RBP26.58■■□□□ 1.85
LRP8-204ENST00000371454 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
LRP8-204ENST00000371454 MTUS2Q5JR59 1369 aa26.54■■□□□ 1.84
LRP8-204ENST00000371454 CFTRP13569 1480 aa26.5■■□□□ 1.83
LRP8-204ENST00000371454 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
LRP8-204ENST00000371454 PTPRKQ15262 1439 aa26.49■■□□□ 1.83
LRP8-204ENST00000371454 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.836e-7■■■■□ 26.7
LRP8-204ENST00000371454 BIVM-ERCC5R4GMW8 1640 aa26.46■■□□□ 1.83
LRP8-204ENST00000371454 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
LRP8-204ENST00000371454 PAK3O75914 559 aaPredicted RBP26.45■■□□□ 1.83
LRP8-204ENST00000371454 NPM2Q86SE8 214 aaKnown RBP26.43■■□□□ 1.82
LRP8-204ENST00000371454 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
LRP8-204ENST00000371454 CCDC18Q5T9S5 1454 aa26.41■■□□□ 1.82
LRP8-204ENST00000371454 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
LRP8-204ENST00000371454 EIF4G2P78344 907 aaKnown RBP eCLIP26.4■■□□□ 1.824e-7■■■■□ 23.1
LRP8-204ENST00000371454 PCF11O94913 1555 aaKnown RBP26.4■■□□□ 1.82
LRP8-204ENST00000371454 DEKP35659 375 aaKnown RBP26.39■■□□□ 1.81
LRP8-204ENST00000371454 PPP4R2Q9NY27 417 aa26.35■■□□□ 1.81
LRP8-204ENST00000371454 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
LRP8-204ENST00000371454 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
LRP8-204ENST00000371454 RTN4Q9NQC3 1192 aaKnown RBP26.31■■□□□ 1.8
LRP8-204ENST00000371454 PRKRIP1Q9H875 184 aaPredicted RBP26.31■■□□□ 1.8
LRP8-204ENST00000371454 FGD6Q6ZV73 1430 aa26.3■■□□□ 1.8
LRP8-204ENST00000371454 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
LRP8-204ENST00000371454 TIMELESSQ9UNS1 1208 aa26.28■■□□□ 1.8
LRP8-204ENST00000371454 AKNAQ7Z591 1439 aa26.26■■□□□ 1.79
LRP8-204ENST00000371454 CCDC136Q96JN2 1154 aa26.24■■□□□ 1.79
LRP8-204ENST00000371454 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
LRP8-204ENST00000371454 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
LRP8-204ENST00000371454 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
LRP8-204ENST00000371454 SKAP1Q86WV1 359 aa26.23■■□□□ 1.79
LRP8-204ENST00000371454 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
LRP8-204ENST00000371454 ZNF644Q9H582 1327 aaPredicted RBP26.22■■□□□ 1.79
LRP8-204ENST00000371454 NAIPQ13075 1403 aa26.18■■□□□ 1.78
LRP8-204ENST00000371454 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
LRP8-204ENST00000371454 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
LRP8-204ENST00000371454 NOP58Q9Y2X3 529 aaKnown RBP26.17■■□□□ 1.78
LRP8-204ENST00000371454 UACAQ9BZF9 1416 aa26.16■■□□□ 1.78
LRP8-204ENST00000371454 LAS1LQ9Y4W2 734 aaKnown RBP26.16■■□□□ 1.78
LRP8-204ENST00000371454 KIF7Q2M1P5 1343 aa26.12■■□□□ 1.77
LRP8-204ENST00000371454 NCOA2Q15596 1464 aa26.08■■□□□ 1.77
LRP8-204ENST00000371454 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
LRP8-204ENST00000371454 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
LRP8-204ENST00000371454 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
LRP8-204ENST00000371454 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
LRP8-204ENST00000371454 TMC1Q8TDI8 760 aa26.02■■□□□ 1.76
LRP8-204ENST00000371454 CNTLNQ9NXG0 1405 aa26.02■■□□□ 1.76
LRP8-204ENST00000371454 PTPN23Q9H3S7 1636 aa26■■□□□ 1.75
LRP8-204ENST00000371454 ZBED9Q6R2W3 1325 aa26■■□□□ 1.75
LRP8-204ENST00000371454 ANP32AP39687 249 aaKnown RBP26■■□□□ 1.75
LRP8-204ENST00000371454 ZBTB47Q9UFB7 747 aaPredicted RBP25.99■■□□□ 1.75
LRP8-204ENST00000371454 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
LRP8-204ENST00000371454 RTL5Q5HYW3 569 aaPredicted RBP25.98■■□□□ 1.75
LRP8-204ENST00000371454 MYOM3Q5VTT5 1437 aa25.98■■□□□ 1.75
LRP8-204ENST00000371454 KDM6BO15054 1643 aa25.97■■□□□ 1.75
LRP8-204ENST00000371454 PLIN1O60240 522 aa25.97■■□□□ 1.75
LRP8-204ENST00000371454 ANO8Q9HCE9 1232 aaPredicted RBP25.97■■□□□ 1.75
LRP8-204ENST00000371454 IL27Q8NEV9 243 aa25.97■■□□□ 1.75
LRP8-204ENST00000371454 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
LRP8-204ENST00000371454 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms