RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
NDC1-201ENST00000371429 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
NDC1-201ENST00000371429 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
NDC1-201ENST00000371429 MYT1Q01538 1121 aa19.9■□□□□ 0.78
NDC1-201ENST00000371429 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
NDC1-201ENST00000371429 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
NDC1-201ENST00000371429 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
NDC1-201ENST00000371429 ACIN1Q9UKV3 1341 aaKnown RBP19.87■□□□□ 0.77
NDC1-201ENST00000371429 A0A0G2JS52 829 aa19.87■□□□□ 0.77
NDC1-201ENST00000371429 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
NDC1-201ENST00000371429 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.77
NDC1-201ENST00000371429 CUX2O14529 1486 aa19.84■□□□□ 0.77
NDC1-201ENST00000371429 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
NDC1-201ENST00000371429 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
NDC1-201ENST00000371429 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
NDC1-201ENST00000371429 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
NDC1-201ENST00000371429 MRS2Q9HD23 443 aa19.8■□□□□ 0.76
NDC1-201ENST00000371429 NPM2Q86SE8 214 aaKnown RBP19.77■□□□□ 0.76
NDC1-201ENST00000371429 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
NDC1-201ENST00000371429 HAP1P54257 671 aaPredicted RBP19.76■□□□□ 0.75
NDC1-201ENST00000371429 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
NDC1-201ENST00000371429 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
NDC1-201ENST00000371429 FHAD1B1AJZ9 1412 aa19.71■□□□□ 0.75
NDC1-201ENST00000371429 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
NDC1-201ENST00000371429 MLECQ14165 292 aa19.7■□□□□ 0.74
NDC1-201ENST00000371429 CDCA8Q53HL2 280 aa19.69■□□□□ 0.74
NDC1-201ENST00000371429 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
NDC1-201ENST00000371429 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
NDC1-201ENST00000371429 FKBP8Q14318 412 aa19.67■□□□□ 0.74
NDC1-201ENST00000371429 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
NDC1-201ENST00000371429 SOGA1O94964 1423 aa19.66■□□□□ 0.74
NDC1-201ENST00000371429 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
NDC1-201ENST00000371429 POGKQ9P215 609 aa19.66■□□□□ 0.74
NDC1-201ENST00000371429 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
NDC1-201ENST00000371429 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.74
NDC1-201ENST00000371429 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.74
NDC1-201ENST00000371429 LMOD2Q6P5Q4 547 aa19.63■□□□□ 0.73
NDC1-201ENST00000371429 KNSTRNQ9Y448 316 aa19.62■□□□□ 0.73
NDC1-201ENST00000371429 PPM1GO15355 546 aaPredicted RBP19.61■□□□□ 0.73
NDC1-201ENST00000371429 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
NDC1-201ENST00000371429 UPF2Q9HAU5 1272 aaKnown RBP19.61■□□□□ 0.73
NDC1-201ENST00000371429 HSP90AA1P07900 732 aaKnown RBP19.61■□□□□ 0.73
NDC1-201ENST00000371429 KANK1Q14678 1352 aa19.59■□□□□ 0.73
NDC1-201ENST00000371429 GGT6Q6P531 493 aa19.56■□□□□ 0.72
NDC1-201ENST00000371429 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
NDC1-201ENST00000371429 HDGFP51858 240 aaKnown RBP19.56■□□□□ 0.72
NDC1-201ENST00000371429 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
NDC1-201ENST00000371429 MYH16Q9H6N6 1097 aa19.53■□□□□ 0.72
NDC1-201ENST00000371429 SIN3AQ96ST3 1273 aa19.52■□□□□ 0.71
NDC1-201ENST00000371429 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
NDC1-201ENST00000371429 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
NDC1-201ENST00000371429 ARXQ96QS3 562 aa19.48■□□□□ 0.71
NDC1-201ENST00000371429 MIER1Q8N108 512 aa19.47■□□□□ 0.71
NDC1-201ENST00000371429 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
NDC1-201ENST00000371429 NUDCQ9Y266 331 aa19.44■□□□□ 0.7
NDC1-201ENST00000371429 MAPK8IP3Q9UPT6 1336 aa19.42■□□□□ 0.7
NDC1-201ENST00000371429 TNNT2P45379 298 aaPredicted RBP19.41■□□□□ 0.7
NDC1-201ENST00000371429 NEUROD2Q15784 382 aa19.4■□□□□ 0.7
NDC1-201ENST00000371429 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
NDC1-201ENST00000371429 ATAD2BQ9ULI0 1458 aa19.4■□□□□ 0.7
NDC1-201ENST00000371429 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
NDC1-201ENST00000371429 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
NDC1-201ENST00000371429 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
NDC1-201ENST00000371429 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
NDC1-201ENST00000371429 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
NDC1-201ENST00000371429 TMF1P82094 1093 aa19.37■□□□□ 0.69
NDC1-201ENST00000371429 SAFB2Q14151 953 aaKnown RBP eCLIP19.37■□□□□ 0.69
NDC1-201ENST00000371429 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
NDC1-201ENST00000371429 PKD2Q13563 968 aa19.37■□□□□ 0.69
NDC1-201ENST00000371429 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
NDC1-201ENST00000371429 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
NDC1-201ENST00000371429 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
NDC1-201ENST00000371429 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.69
NDC1-201ENST00000371429 STK26Q9P289 416 aa19.33■□□□□ 0.68
NDC1-201ENST00000371429 WIZO95785 1651 aa19.32■□□□□ 0.68
NDC1-201ENST00000371429 SOX12O15370 315 aa19.32■□□□□ 0.68
NDC1-201ENST00000371429 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
NDC1-201ENST00000371429 KIF3BO15066 747 aa19.31■□□□□ 0.68
NDC1-201ENST00000371429 ANP32BQ92688 251 aaKnown RBP19.3■□□□□ 0.68
NDC1-201ENST00000371429 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
NDC1-201ENST00000371429 NUP155O75694 1391 aa19.28■□□□□ 0.68
NDC1-201ENST00000371429 ANKRD30AQ9BXX3 1397 aa19.28■□□□□ 0.68
NDC1-201ENST00000371429 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
NDC1-201ENST00000371429 HNRNPMP52272 730 aaKnown RBP eCLIP19.27■□□□□ 0.672e-6■■■■□ 21.1
NDC1-201ENST00000371429 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.67
NDC1-201ENST00000371429 FOXD1Q16676 465 aa19.26■□□□□ 0.67
NDC1-201ENST00000371429 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
NDC1-201ENST00000371429 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
NDC1-201ENST00000371429 NPHP1O15259 732 aa19.26■□□□□ 0.67
NDC1-201ENST00000371429 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
NDC1-201ENST00000371429 SPAG9O60271 1321 aaKnown RBP19.26■□□□□ 0.67
NDC1-201ENST00000371429 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
NDC1-201ENST00000371429 PNNQ9H307 717 aaKnown RBP19.24■□□□□ 0.67
NDC1-201ENST00000371429 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
NDC1-201ENST00000371429 RSPH4AQ5TD94 716 aa19.23■□□□□ 0.67
NDC1-201ENST00000371429 MORC1Q86VD1 984 aa19.21■□□□□ 0.67
NDC1-201ENST00000371429 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
NDC1-201ENST00000371429 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
NDC1-201ENST00000371429 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
NDC1-201ENST00000371429 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms