RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
PHACTR3-204ENST00000371015 GLIPR1L2Q4G1C9 344 aa22.23■■□□□ 1.15
PHACTR3-204ENST00000371015 CFTRP13569 1480 aa22.22■■□□□ 1.15
PHACTR3-204ENST00000371015 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
PHACTR3-204ENST00000371015 PODXL2Q9NZ53 605 aa22.16■■□□□ 1.14
PHACTR3-204ENST00000371015 NBR1Q14596 966 aa22.14■■□□□ 1.13
PHACTR3-204ENST00000371015 WDR62O43379 1518 aa22.13■■□□□ 1.13
PHACTR3-204ENST00000371015 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
PHACTR3-204ENST00000371015 SOGA1O94964 1423 aa22.12■■□□□ 1.13
PHACTR3-204ENST00000371015 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
PHACTR3-204ENST00000371015 USP35Q9P2H5 1018 aa22.08■■□□□ 1.13
PHACTR3-204ENST00000371015 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
PHACTR3-204ENST00000371015 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
PHACTR3-204ENST00000371015 NESP48681 1621 aa22.06■■□□□ 1.12
PHACTR3-204ENST00000371015 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
PHACTR3-204ENST00000371015 RTN4Q9NQC3 1192 aaKnown RBP22.05■■□□□ 1.12
PHACTR3-204ENST00000371015 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
PHACTR3-204ENST00000371015 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
PHACTR3-204ENST00000371015 WASHC2CQ9Y4E1 1318 aa22.01■■□□□ 1.11
PHACTR3-204ENST00000371015 KCNH8Q96L42 1107 aa22■■□□□ 1.11
PHACTR3-204ENST00000371015 FANCD2Q9BXW9 1451 aa21.99■■□□□ 1.11
PHACTR3-204ENST00000371015 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
PHACTR3-204ENST00000371015 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
PHACTR3-204ENST00000371015 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
PHACTR3-204ENST00000371015 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
PHACTR3-204ENST00000371015 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
PHACTR3-204ENST00000371015 IPO9Q96P70 1041 aaKnown RBP21.94■■□□□ 1.1
PHACTR3-204ENST00000371015 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
PHACTR3-204ENST00000371015 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
PHACTR3-204ENST00000371015 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
PHACTR3-204ENST00000371015 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
PHACTR3-204ENST00000371015 KIF21BO75037 1637 aa21.87■■□□□ 1.09
PHACTR3-204ENST00000371015 ZMYND15Q9H091 742 aa21.85■■□□□ 1.09
PHACTR3-204ENST00000371015 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
PHACTR3-204ENST00000371015 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
PHACTR3-204ENST00000371015 CLIP1P30622 1438 aa21.77■■□□□ 1.08
PHACTR3-204ENST00000371015 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
PHACTR3-204ENST00000371015 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
PHACTR3-204ENST00000371015 PPM1GO15355 546 aaPredicted RBP21.74■■□□□ 1.07
PHACTR3-204ENST00000371015 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
PHACTR3-204ENST00000371015 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
PHACTR3-204ENST00000371015 ANP32CO43423 234 aa21.73■■□□□ 1.07
PHACTR3-204ENST00000371015 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
PHACTR3-204ENST00000371015 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
PHACTR3-204ENST00000371015 NEFMP07197 916 aa21.69■■□□□ 1.06
PHACTR3-204ENST00000371015 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
PHACTR3-204ENST00000371015 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
PHACTR3-204ENST00000371015 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.05
PHACTR3-204ENST00000371015 GSE1Q14687 1217 aa21.64■■□□□ 1.05
PHACTR3-204ENST00000371015 BRPF3Q9ULD4 1205 aa21.63■■□□□ 1.05
PHACTR3-204ENST00000371015 TIMELESSQ9UNS1 1208 aa21.61■■□□□ 1.05
PHACTR3-204ENST00000371015 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
PHACTR3-204ENST00000371015 RRP9O43818 475 aaKnown RBP21.59■■□□□ 1.05
PHACTR3-204ENST00000371015 IRX6P78412 446 aaPredicted RBP21.54■■□□□ 1.04
PHACTR3-204ENST00000371015 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
PHACTR3-204ENST00000371015 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
PHACTR3-204ENST00000371015 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
PHACTR3-204ENST00000371015 B4GALNT3Q6L9W6 998 aa21.5■■□□□ 1.03
PHACTR3-204ENST00000371015 HNRNPUQ00839 825 aaKnown RBP eCLIP21.49■■□□□ 1.03
PHACTR3-204ENST00000371015 HSP90AA2PQ14568 343 aaPredicted RBP21.48■■□□□ 1.03
PHACTR3-204ENST00000371015 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
PHACTR3-204ENST00000371015 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
PHACTR3-204ENST00000371015 FGD1P98174 961 aa21.42■■□□□ 1.02
PHACTR3-204ENST00000371015 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
PHACTR3-204ENST00000371015 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
PHACTR3-204ENST00000371015 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
PHACTR3-204ENST00000371015 CUX1P39880 1505 aa21.38■■□□□ 1.01
PHACTR3-204ENST00000371015 AAMPQ13685 434 aa21.37■■□□□ 1.01
PHACTR3-204ENST00000371015 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
PHACTR3-204ENST00000371015 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
PHACTR3-204ENST00000371015 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
PHACTR3-204ENST00000371015 PDE4CQ08493 712 aa21.35■■□□□ 1.01
PHACTR3-204ENST00000371015 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
PHACTR3-204ENST00000371015 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
PHACTR3-204ENST00000371015 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1.01
PHACTR3-204ENST00000371015 RBM10P98175 930 aaKnown RBP21.33■■□□□ 1.01
PHACTR3-204ENST00000371015 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
PHACTR3-204ENST00000371015 FRAT1Q92837 279 aaPredicted RBP21.32■■□□□ 1
PHACTR3-204ENST00000371015 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
PHACTR3-204ENST00000371015 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
PHACTR3-204ENST00000371015 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
PHACTR3-204ENST00000371015 PBRM1Q86U86 1689 aa21.28■■□□□ 1
PHACTR3-204ENST00000371015 CENPJQ9HC77 1338 aaPredicted RBP21.27■■□□□ 1
PHACTR3-204ENST00000371015 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
PHACTR3-204ENST00000371015 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
PHACTR3-204ENST00000371015 NFKBIBQ15653 356 aa21.25■□□□□ 0.99
PHACTR3-204ENST00000371015 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
PHACTR3-204ENST00000371015 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
PHACTR3-204ENST00000371015 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
PHACTR3-204ENST00000371015 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
PHACTR3-204ENST00000371015 MS4A1P11836 297 aa21.23■□□□□ 0.99
PHACTR3-204ENST00000371015 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.99
PHACTR3-204ENST00000371015 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
PHACTR3-204ENST00000371015 PDIA4P13667 645 aaKnown RBP21.18■□□□□ 0.98
PHACTR3-204ENST00000371015 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
PHACTR3-204ENST00000371015 A0A0U1RQG5 324 aaPredicted RBP21.18■□□□□ 0.98
PHACTR3-204ENST00000371015 CHD1O14646 1710 aa21.17■□□□□ 0.98
PHACTR3-204ENST00000371015 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
PHACTR3-204ENST00000371015 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
PHACTR3-204ENST00000371015 NAP1L5Q96NT1 182 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms