RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
PHACTR3-204ENST00000371015 PELP1Q8IZL8 1130 aaKnown RBP28.21■■■□□ 2.11
PHACTR3-204ENST00000371015 MYT1Q01538 1121 aa27.64■■■□□ 2.02
PHACTR3-204ENST00000371015 HRCP23327 699 aa27.12■■□□□ 1.93
PHACTR3-204ENST00000371015 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
PHACTR3-204ENST00000371015 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
PHACTR3-204ENST00000371015 SCAF1Q9H7N4 1312 aaKnown RBP25.99■■□□□ 1.75
PHACTR3-204ENST00000371015 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.75
PHACTR3-204ENST00000371015 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
PHACTR3-204ENST00000371015 ABCC9O60706 1549 aa25.58■■□□□ 1.69
PHACTR3-204ENST00000371015 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
PHACTR3-204ENST00000371015 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
PHACTR3-204ENST00000371015 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
PHACTR3-204ENST00000371015 NACADO15069 1562 aa25.27■■□□□ 1.64
PHACTR3-204ENST00000371015 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
PHACTR3-204ENST00000371015 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PHACTR3-204ENST00000371015 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
PHACTR3-204ENST00000371015 CENPBP07199 599 aaPredicted RBP25.08■■□□□ 1.61
PHACTR3-204ENST00000371015 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
PHACTR3-204ENST00000371015 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
PHACTR3-204ENST00000371015 GTF3C3Q9Y5Q9 886 aa24.93■■□□□ 1.58
PHACTR3-204ENST00000371015 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
PHACTR3-204ENST00000371015 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
PHACTR3-204ENST00000371015 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.56
PHACTR3-204ENST00000371015 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
PHACTR3-204ENST00000371015 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
PHACTR3-204ENST00000371015 PRKCSHP14314 528 aaPredicted RBP24.75■■□□□ 1.55
PHACTR3-204ENST00000371015 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
PHACTR3-204ENST00000371015 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
PHACTR3-204ENST00000371015 ANP32EQ9BTT0 268 aa24.46■■□□□ 1.51
PHACTR3-204ENST00000371015 APLP2Q06481 763 aa24.37■■□□□ 1.49
PHACTR3-204ENST00000371015 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
PHACTR3-204ENST00000371015 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
PHACTR3-204ENST00000371015 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
PHACTR3-204ENST00000371015 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.44
PHACTR3-204ENST00000371015 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
PHACTR3-204ENST00000371015 CSRNP3Q8WYN3 585 aa23.97■■□□□ 1.43
PHACTR3-204ENST00000371015 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
PHACTR3-204ENST00000371015 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
PHACTR3-204ENST00000371015 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
PHACTR3-204ENST00000371015 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
PHACTR3-204ENST00000371015 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
PHACTR3-204ENST00000371015 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
PHACTR3-204ENST00000371015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
PHACTR3-204ENST00000371015 SUPT16HQ9Y5B9 1047 aaKnown RBP23.57■■□□□ 1.36
PHACTR3-204ENST00000371015 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
PHACTR3-204ENST00000371015 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
PHACTR3-204ENST00000371015 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
PHACTR3-204ENST00000371015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
PHACTR3-204ENST00000371015 MIER1Q8N108 512 aa23.35■■□□□ 1.33
PHACTR3-204ENST00000371015 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
PHACTR3-204ENST00000371015 ERICH6BQ5W0A0 696 aa23.25■■□□□ 1.31
PHACTR3-204ENST00000371015 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
PHACTR3-204ENST00000371015 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
PHACTR3-204ENST00000371015 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
PHACTR3-204ENST00000371015 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
PHACTR3-204ENST00000371015 UBE2Q2Q8WVN8 375 aa23.22■■□□□ 1.31
PHACTR3-204ENST00000371015 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
PHACTR3-204ENST00000371015 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
PHACTR3-204ENST00000371015 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
PHACTR3-204ENST00000371015 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
PHACTR3-204ENST00000371015 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
PHACTR3-204ENST00000371015 RBM19Q9Y4C8 960 aaKnown RBP23.11■■□□□ 1.29
PHACTR3-204ENST00000371015 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
PHACTR3-204ENST00000371015 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
PHACTR3-204ENST00000371015 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
PHACTR3-204ENST00000371015 DEKP35659 375 aaKnown RBP22.91■■□□□ 1.26
PHACTR3-204ENST00000371015 MSH5O43196 834 aa22.87■■□□□ 1.25
PHACTR3-204ENST00000371015 EIF5BO60841 1220 aaKnown RBP22.86■■□□□ 1.25
PHACTR3-204ENST00000371015 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
PHACTR3-204ENST00000371015 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
PHACTR3-204ENST00000371015 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
PHACTR3-204ENST00000371015 DAXXQ9UER7 740 aaPredicted RBP22.71■■□□□ 1.23
PHACTR3-204ENST00000371015 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
PHACTR3-204ENST00000371015 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
PHACTR3-204ENST00000371015 NEFLP07196 543 aa22.67■■□□□ 1.22
PHACTR3-204ENST00000371015 WIZO95785 1651 aa22.65■■□□□ 1.22
PHACTR3-204ENST00000371015 FKBP8Q14318 412 aa22.65■■□□□ 1.22
PHACTR3-204ENST00000371015 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
PHACTR3-204ENST00000371015 BCANQ96GW7 911 aa22.57■■□□□ 1.2
PHACTR3-204ENST00000371015 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
PHACTR3-204ENST00000371015 CUX2O14529 1486 aa22.52■■□□□ 1.19
PHACTR3-204ENST00000371015 PKNOX2Q96KN3 472 aa22.51■■□□□ 1.19
PHACTR3-204ENST00000371015 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
PHACTR3-204ENST00000371015 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
PHACTR3-204ENST00000371015 CDK11AQ9UQ88 783 aaPredicted RBP22.48■■□□□ 1.19
PHACTR3-204ENST00000371015 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
PHACTR3-204ENST00000371015 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
PHACTR3-204ENST00000371015 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
PHACTR3-204ENST00000371015 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
PHACTR3-204ENST00000371015 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
PHACTR3-204ENST00000371015 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
PHACTR3-204ENST00000371015 CEP162Q5TB80 1403 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ITGAEP38570 1179 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 EEA1Q15075 1411 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 IL27Q8NEV9 243 aa22.24■■□□□ 1.15
PHACTR3-204ENST00000371015 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms