RNA–Protein interactions for RNA: ENST00000369905.8

ACTR1A-201, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1A, Length 2,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-201ENST00000369905 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
ACTR1A-201ENST00000369905 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
ACTR1A-201ENST00000369905 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
ACTR1A-201ENST00000369905 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
ACTR1A-201ENST00000369905 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
ACTR1A-201ENST00000369905 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
ACTR1A-201ENST00000369905 WDR97A6NE52 1622 aa17.34■□□□□ 0.37
ACTR1A-201ENST00000369905 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
ACTR1A-201ENST00000369905 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
ACTR1A-201ENST00000369905 BCANQ96GW7 911 aa17.3■□□□□ 0.36
ACTR1A-201ENST00000369905 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
ACTR1A-201ENST00000369905 MAP3K1Q13233 1512 aa17.27■□□□□ 0.35
ACTR1A-201ENST00000369905 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
ACTR1A-201ENST00000369905 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
ACTR1A-201ENST00000369905 FHAD1B1AJZ9 1412 aa17.24■□□□□ 0.35
ACTR1A-201ENST00000369905 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
ACTR1A-201ENST00000369905 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
ACTR1A-201ENST00000369905 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
ACTR1A-201ENST00000369905 FKBP8Q14318 412 aa17.19■□□□□ 0.34
ACTR1A-201ENST00000369905 NESP48681 1621 aa17.19■□□□□ 0.34
ACTR1A-201ENST00000369905 MYT1Q01538 1121 aa17.18■□□□□ 0.34
ACTR1A-201ENST00000369905 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
ACTR1A-201ENST00000369905 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
ACTR1A-201ENST00000369905 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
ACTR1A-201ENST00000369905 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
ACTR1A-201ENST00000369905 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
ACTR1A-201ENST00000369905 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
ACTR1A-201ENST00000369905 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
ACTR1A-201ENST00000369905 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
ACTR1A-201ENST00000369905 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
ACTR1A-201ENST00000369905 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
ACTR1A-201ENST00000369905 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
ACTR1A-201ENST00000369905 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
ACTR1A-201ENST00000369905 ANP32CO43423 234 aa17.08■□□□□ 0.32
ACTR1A-201ENST00000369905 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
ACTR1A-201ENST00000369905 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
ACTR1A-201ENST00000369905 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
ACTR1A-201ENST00000369905 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■■□□□ 13.8
ACTR1A-201ENST00000369905 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
ACTR1A-201ENST00000369905 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
ACTR1A-201ENST00000369905 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
ACTR1A-201ENST00000369905 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
ACTR1A-201ENST00000369905 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
ACTR1A-201ENST00000369905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.32
ACTR1A-201ENST00000369905 FMN1Q68DA7 1419 aa17.02■□□□□ 0.32
ACTR1A-201ENST00000369905 ARID3CA6NKF2 412 aa17.02■□□□□ 0.32
ACTR1A-201ENST00000369905 CCER2I3L3R5 266 aa17.01■□□□□ 0.31
ACTR1A-201ENST00000369905 HFM1A2PYH4 1435 aa17■□□□□ 0.31
ACTR1A-201ENST00000369905 NAIPQ13075 1403 aa17■□□□□ 0.31
ACTR1A-201ENST00000369905 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
ACTR1A-201ENST00000369905 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
ACTR1A-201ENST00000369905 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
ACTR1A-201ENST00000369905 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
ACTR1A-201ENST00000369905 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
ACTR1A-201ENST00000369905 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
ACTR1A-201ENST00000369905 CUL7Q14999 1698 aa16.96■□□□□ 0.31
ACTR1A-201ENST00000369905 MYOM3Q5VTT5 1437 aa16.95■□□□□ 0.3
ACTR1A-201ENST00000369905 NEFLP07196 543 aa16.95■□□□□ 0.3
ACTR1A-201ENST00000369905 FOXD1Q16676 465 aa16.95■□□□□ 0.3
ACTR1A-201ENST00000369905 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
ACTR1A-201ENST00000369905 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 KDM5BQ9UGL1 1544 aa16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTR1A-201ENST00000369905 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
ACTR1A-201ENST00000369905 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
ACTR1A-201ENST00000369905 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
ACTR1A-201ENST00000369905 RBM19Q9Y4C8 960 aaKnown RBP16.9■□□□□ 0.3
ACTR1A-201ENST00000369905 SAMD9Q5K651 1589 aa16.89■□□□□ 0.3
ACTR1A-201ENST00000369905 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
ACTR1A-201ENST00000369905 KDM6BO15054 1643 aa16.87■□□□□ 0.29
ACTR1A-201ENST00000369905 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
ACTR1A-201ENST00000369905 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
ACTR1A-201ENST00000369905 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
ACTR1A-201ENST00000369905 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
ACTR1A-201ENST00000369905 UGGT2Q9NYU1 1516 aa16.84■□□□□ 0.29
ACTR1A-201ENST00000369905 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
ACTR1A-201ENST00000369905 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
ACTR1A-201ENST00000369905 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
ACTR1A-201ENST00000369905 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.285e-12■□□□□ 11.1
ACTR1A-201ENST00000369905 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
ACTR1A-201ENST00000369905 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
ACTR1A-201ENST00000369905 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
ACTR1A-201ENST00000369905 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
ACTR1A-201ENST00000369905 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
ACTR1A-201ENST00000369905 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.27
ACTR1A-201ENST00000369905 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
ACTR1A-201ENST00000369905 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
ACTR1A-201ENST00000369905 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
ACTR1A-201ENST00000369905 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
ACTR1A-201ENST00000369905 MSH5O43196 834 aa16.73■□□□□ 0.27
ACTR1A-201ENST00000369905 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
ACTR1A-201ENST00000369905 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
ACTR1A-201ENST00000369905 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
ACTR1A-201ENST00000369905 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
ACTR1A-201ENST00000369905 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
ACTR1A-201ENST00000369905 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
ACTR1A-201ENST00000369905 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms