RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
LRIF1-201ENST00000369763 CFTRP13569 1480 aa15.52■□□□□ 0.08
LRIF1-201ENST00000369763 ARID3CA6NKF2 412 aa15.52■□□□□ 0.08
LRIF1-201ENST00000369763 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
LRIF1-201ENST00000369763 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
LRIF1-201ENST00000369763 FHOD3Q2V2M9 1422 aa15.5■□□□□ 0.07
LRIF1-201ENST00000369763 MAPKBP1O60336 1514 aa15.47■□□□□ 0.07
LRIF1-201ENST00000369763 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
LRIF1-201ENST00000369763 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
LRIF1-201ENST00000369763 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
LRIF1-201ENST00000369763 LRRC9Q6ZRR7 1453 aa15.44■□□□□ 0.06
LRIF1-201ENST00000369763 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
LRIF1-201ENST00000369763 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
LRIF1-201ENST00000369763 MYT1Q01538 1121 aa15.43■□□□□ 0.06
LRIF1-201ENST00000369763 ANP32CO43423 234 aa15.43■□□□□ 0.06
LRIF1-201ENST00000369763 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
LRIF1-201ENST00000369763 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
LRIF1-201ENST00000369763 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
LRIF1-201ENST00000369763 TIAM1Q13009 1591 aa15.41■□□□□ 0.06
LRIF1-201ENST00000369763 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
LRIF1-201ENST00000369763 NEFLP07196 543 aa15.4■□□□□ 0.06
LRIF1-201ENST00000369763 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
LRIF1-201ENST00000369763 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
LRIF1-201ENST00000369763 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
LRIF1-201ENST00000369763 FHAD1B1AJZ9 1412 aa15.35■□□□□ 0.05
LRIF1-201ENST00000369763 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
LRIF1-201ENST00000369763 FOXD1Q16676 465 aa15.33■□□□□ 0.04
LRIF1-201ENST00000369763 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
LRIF1-201ENST00000369763 NESP48681 1621 aa15.32■□□□□ 0.04
LRIF1-201ENST00000369763 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
LRIF1-201ENST00000369763 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
LRIF1-201ENST00000369763 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
LRIF1-201ENST00000369763 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
LRIF1-201ENST00000369763 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
LRIF1-201ENST00000369763 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
LRIF1-201ENST00000369763 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
LRIF1-201ENST00000369763 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
LRIF1-201ENST00000369763 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
LRIF1-201ENST00000369763 CCDC18Q5T9S5 1454 aa15.22■□□□□ 0.03
LRIF1-201ENST00000369763 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
LRIF1-201ENST00000369763 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
LRIF1-201ENST00000369763 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
LRIF1-201ENST00000369763 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
LRIF1-201ENST00000369763 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
LRIF1-201ENST00000369763 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
LRIF1-201ENST00000369763 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
LRIF1-201ENST00000369763 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.026e-9■■□□□ 11.5
LRIF1-201ENST00000369763 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
LRIF1-201ENST00000369763 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
LRIF1-201ENST00000369763 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
LRIF1-201ENST00000369763 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
LRIF1-201ENST00000369763 FYCO1Q9BQS8 1478 aa15.16■□□□□ 0.02
LRIF1-201ENST00000369763 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
LRIF1-201ENST00000369763 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
LRIF1-201ENST00000369763 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
LRIF1-201ENST00000369763 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
LRIF1-201ENST00000369763 NAIPQ13075 1403 aa15.13■□□□□ 0.01
LRIF1-201ENST00000369763 UACAQ9BZF9 1416 aa15.12■□□□□ 0.01
LRIF1-201ENST00000369763 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
LRIF1-201ENST00000369763 EIF4G2P78344 907 aaKnown RBP eCLIP15.11■□□□□ 0.01
LRIF1-201ENST00000369763 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
LRIF1-201ENST00000369763 HFM1A2PYH4 1435 aa15.1■□□□□ 0.01
LRIF1-201ENST00000369763 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
LRIF1-201ENST00000369763 MPHOSPH9Q99550 1183 aa15.1■□□□□ 0.01
LRIF1-201ENST00000369763 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
LRIF1-201ENST00000369763 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
LRIF1-201ENST00000369763 ZNF644Q9H582 1327 aaPredicted RBP15.09■□□□□ 0.01
LRIF1-201ENST00000369763 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
LRIF1-201ENST00000369763 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
LRIF1-201ENST00000369763 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
LRIF1-201ENST00000369763 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
LRIF1-201ENST00000369763 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
LRIF1-201ENST00000369763 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
LRIF1-201ENST00000369763 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
LRIF1-201ENST00000369763 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
LRIF1-201ENST00000369763 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
LRIF1-201ENST00000369763 EFCAB5A4FU69 1503 aa15.04■□□□□ -0
LRIF1-201ENST00000369763 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
LRIF1-201ENST00000369763 MSH5O43196 834 aa15.03■□□□□ -0
LRIF1-201ENST00000369763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
LRIF1-201ENST00000369763 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
LRIF1-201ENST00000369763 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
LRIF1-201ENST00000369763 FBLN2P98095 1184 aa15□□□□□ -0.01
LRIF1-201ENST00000369763 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
LRIF1-201ENST00000369763 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
LRIF1-201ENST00000369763 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
LRIF1-201ENST00000369763 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
LRIF1-201ENST00000369763 KDM6BO15054 1643 aa14.96□□□□□ -0.01
LRIF1-201ENST00000369763 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
LRIF1-201ENST00000369763 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
LRIF1-201ENST00000369763 PDS5BQ9NTI5 1447 aa14.94□□□□□ -0.02
LRIF1-201ENST00000369763 KDM2AQ9Y2K7 1162 aa14.94□□□□□ -0.02
LRIF1-201ENST00000369763 DENND4BO75064 1496 aaPredicted RBP14.93□□□□□ -0.02
LRIF1-201ENST00000369763 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
LRIF1-201ENST00000369763 CUL7Q14999 1698 aa14.93□□□□□ -0.02
LRIF1-201ENST00000369763 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
LRIF1-201ENST00000369763 CCDC7Q96M83 1385 aa14.92□□□□□ -0.02
LRIF1-201ENST00000369763 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
LRIF1-201ENST00000369763 SUPT6HQ7KZ85 1726 aaKnown RBP14.91□□□□□ -0.02
LRIF1-201ENST00000369763 CNTLNQ9NXG0 1405 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms