RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 PTMAP06454 111 aaKnown RBP20.83■□□□□ 0.93
PRDM1-203ENST00000369096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
PRDM1-203ENST00000369096 ANP32EQ9BTT0 268 aa20.82■□□□□ 0.92
PRDM1-203ENST00000369096 ZRSR1Q15695 479 aaKnown RBP20.82■□□□□ 0.92
PRDM1-203ENST00000369096 DNTTIP2Q5QJE6 756 aaKnown RBP20.8■□□□□ 0.92
PRDM1-203ENST00000369096 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
PRDM1-203ENST00000369096 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
PRDM1-203ENST00000369096 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
PRDM1-203ENST00000369096 TULP1O00294 542 aaPredicted RBP20.75■□□□□ 0.91
PRDM1-203ENST00000369096 TPRNQ4KMQ1 711 aa20.75■□□□□ 0.91
PRDM1-203ENST00000369096 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
PRDM1-203ENST00000369096 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
PRDM1-203ENST00000369096 ZBTB7CA1YPR0 619 aa20.74■□□□□ 0.91
PRDM1-203ENST00000369096 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
PRDM1-203ENST00000369096 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
PRDM1-203ENST00000369096 ERICH6BQ5W0A0 696 aa20.67■□□□□ 0.9
PRDM1-203ENST00000369096 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.9
PRDM1-203ENST00000369096 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.9
PRDM1-203ENST00000369096 NAP1L5Q96NT1 182 aaPredicted RBP20.64■□□□□ 0.89
PRDM1-203ENST00000369096 PLCB2Q00722 1185 aa20.63■□□□□ 0.89
PRDM1-203ENST00000369096 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
PRDM1-203ENST00000369096 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
PRDM1-203ENST00000369096 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
PRDM1-203ENST00000369096 MIER1Q8N108 512 aa20.59■□□□□ 0.89
PRDM1-203ENST00000369096 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.88
PRDM1-203ENST00000369096 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
PRDM1-203ENST00000369096 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
PRDM1-203ENST00000369096 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
PRDM1-203ENST00000369096 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
PRDM1-203ENST00000369096 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
PRDM1-203ENST00000369096 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
PRDM1-203ENST00000369096 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
PRDM1-203ENST00000369096 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
PRDM1-203ENST00000369096 FTSJ3Q8IY81 847 aaKnown RBP20.5■□□□□ 0.87
PRDM1-203ENST00000369096 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
PRDM1-203ENST00000369096 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
PRDM1-203ENST00000369096 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
PRDM1-203ENST00000369096 NRDCO43847 1150 aa20.46■□□□□ 0.87
PRDM1-203ENST00000369096 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
PRDM1-203ENST00000369096 FGD1P98174 961 aa20.45■□□□□ 0.86
PRDM1-203ENST00000369096 RGS3P49796 1198 aa20.44■□□□□ 0.86
PRDM1-203ENST00000369096 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
PRDM1-203ENST00000369096 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
PRDM1-203ENST00000369096 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
PRDM1-203ENST00000369096 WIZO95785 1651 aa20.4■□□□□ 0.86
PRDM1-203ENST00000369096 AMER1Q5JTC6 1135 aaPredicted RBP20.39■□□□□ 0.86
PRDM1-203ENST00000369096 NAP1L2Q9ULW6 460 aaPredicted RBP20.38■□□□□ 0.85
PRDM1-203ENST00000369096 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
PRDM1-203ENST00000369096 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
PRDM1-203ENST00000369096 KCNJ4P48050 445 aa20.36■□□□□ 0.85
PRDM1-203ENST00000369096 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
PRDM1-203ENST00000369096 GOLGA6L4A6NEF3 574 aa20.35■□□□□ 0.85
PRDM1-203ENST00000369096 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
PRDM1-203ENST00000369096 FRAT1Q92837 279 aaPredicted RBP20.35■□□□□ 0.85
PRDM1-203ENST00000369096 NPHP1O15259 732 aa20.34■□□□□ 0.85
PRDM1-203ENST00000369096 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
PRDM1-203ENST00000369096 RRP7BPQ9NSQ0 103 aa20.34■□□□□ 0.85
PRDM1-203ENST00000369096 MAPK8IP3Q9UPT6 1336 aa20.33■□□□□ 0.85
PRDM1-203ENST00000369096 OS9Q13438 667 aaPredicted RBP20.33■□□□□ 0.85
PRDM1-203ENST00000369096 NOP58Q9Y2X3 529 aaKnown RBP20.3■□□□□ 0.84
PRDM1-203ENST00000369096 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
PRDM1-203ENST00000369096 CLSTN1O94985 981 aa20.28■□□□□ 0.84
PRDM1-203ENST00000369096 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
PRDM1-203ENST00000369096 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
PRDM1-203ENST00000369096 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
PRDM1-203ENST00000369096 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
PRDM1-203ENST00000369096 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
PRDM1-203ENST00000369096 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
PRDM1-203ENST00000369096 CHMP4BQ9H444 224 aaKnown RBP20.23■□□□□ 0.83
PRDM1-203ENST00000369096 DRC7Q8IY82 874 aa20.22■□□□□ 0.83
PRDM1-203ENST00000369096 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
PRDM1-203ENST00000369096 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
PRDM1-203ENST00000369096 HSCBQ8IWL3 235 aa20.2■□□□□ 0.82
PRDM1-203ENST00000369096 CARD11Q9BXL7 1154 aa20.19■□□□□ 0.82
PRDM1-203ENST00000369096 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
PRDM1-203ENST00000369096 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
PRDM1-203ENST00000369096 MS4A1P11836 297 aa20.17■□□□□ 0.82
PRDM1-203ENST00000369096 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
PRDM1-203ENST00000369096 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
PRDM1-203ENST00000369096 B4GALNT3Q6L9W6 998 aa20.15■□□□□ 0.82
PRDM1-203ENST00000369096 SPRYD3Q8NCJ5 442 aa20.15■□□□□ 0.82
PRDM1-203ENST00000369096 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
PRDM1-203ENST00000369096 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
PRDM1-203ENST00000369096 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-203ENST00000369096 POGKQ9P215 609 aa20.13■□□□□ 0.81
PRDM1-203ENST00000369096 MCCP23508 829 aa20.1■□□□□ 0.81
PRDM1-203ENST00000369096 ARID3AQ99856 593 aa20.09■□□□□ 0.81
PRDM1-203ENST00000369096 GNL2Q13823 731 aaKnown RBP20.08■□□□□ 0.8
PRDM1-203ENST00000369096 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
PRDM1-203ENST00000369096 DEKP35659 375 aaKnown RBP20.07■□□□□ 0.8
PRDM1-203ENST00000369096 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
PRDM1-203ENST00000369096 NOC3LQ8WTT2 800 aaKnown RBP20.05■□□□□ 0.8
PRDM1-203ENST00000369096 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
PRDM1-203ENST00000369096 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
PRDM1-203ENST00000369096 TNNT3P45378 269 aaPredicted RBP20.03■□□□□ 0.8
PRDM1-203ENST00000369096 EEA1Q15075 1411 aa20.03■□□□□ 0.8
PRDM1-203ENST00000369096 SOX12O15370 315 aa20■□□□□ 0.79
PRDM1-203ENST00000369096 APBB1O00213 710 aa20■□□□□ 0.79
PRDM1-203ENST00000369096 CLIP1P30622 1438 aa19.97■□□□□ 0.79
PRDM1-203ENST00000369096 GZF1Q9H116 711 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms