RNA–Protein interactions for RNA: ENST00000368636.8

BNIP3-201, Transcript of BCL2 interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BNIP3, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-201ENST00000368636 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
BNIP3-201ENST00000368636 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
BNIP3-201ENST00000368636 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
BNIP3-201ENST00000368636 HIRIP3Q9BW71 556 aaPredicted RBP20.87■□□□□ 0.93
BNIP3-201ENST00000368636 CLSPNQ9HAW4 1339 aa20.87■□□□□ 0.93
BNIP3-201ENST00000368636 DDX10Q13206 875 aaKnown RBP20.85■□□□□ 0.93
BNIP3-201ENST00000368636 KIF21BO75037 1637 aa20.84■□□□□ 0.93
BNIP3-201ENST00000368636 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
BNIP3-201ENST00000368636 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
BNIP3-201ENST00000368636 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
BNIP3-201ENST00000368636 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
BNIP3-201ENST00000368636 IGF1RP08069 1367 aa20.76■□□□□ 0.91
BNIP3-201ENST00000368636 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
BNIP3-201ENST00000368636 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
BNIP3-201ENST00000368636 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.917e-11■■■■■ 47.6
BNIP3-201ENST00000368636 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
BNIP3-201ENST00000368636 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
BNIP3-201ENST00000368636 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
BNIP3-201ENST00000368636 MSH5O43196 834 aa20.63■□□□□ 0.89
BNIP3-201ENST00000368636 IRX6P78412 446 aaPredicted RBP20.63■□□□□ 0.89
BNIP3-201ENST00000368636 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
BNIP3-201ENST00000368636 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
BNIP3-201ENST00000368636 NEFLP07196 543 aa20.61■□□□□ 0.89
BNIP3-201ENST00000368636 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
BNIP3-201ENST00000368636 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
BNIP3-201ENST00000368636 FBLN2P98095 1184 aa20.6■□□□□ 0.89
BNIP3-201ENST00000368636 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
BNIP3-201ENST00000368636 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.88
BNIP3-201ENST00000368636 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
BNIP3-201ENST00000368636 WDR62O43379 1518 aa20.54■□□□□ 0.88
BNIP3-201ENST00000368636 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
BNIP3-201ENST00000368636 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
BNIP3-201ENST00000368636 TARBP1Q13395 1621 aaKnown RBP20.52■□□□□ 0.88
BNIP3-201ENST00000368636 MAPKBP1O60336 1514 aa20.52■□□□□ 0.87
BNIP3-201ENST00000368636 PPP1R15AO75807 674 aaPredicted RBP20.51■□□□□ 0.87
BNIP3-201ENST00000368636 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
BNIP3-201ENST00000368636 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
BNIP3-201ENST00000368636 ANP32CO43423 234 aa20.44■□□□□ 0.86
BNIP3-201ENST00000368636 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
BNIP3-201ENST00000368636 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
BNIP3-201ENST00000368636 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
BNIP3-201ENST00000368636 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
BNIP3-201ENST00000368636 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
BNIP3-201ENST00000368636 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
BNIP3-201ENST00000368636 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
BNIP3-201ENST00000368636 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
BNIP3-201ENST00000368636 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
BNIP3-201ENST00000368636 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
BNIP3-201ENST00000368636 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.85
BNIP3-201ENST00000368636 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
BNIP3-201ENST00000368636 CCER2I3L3R5 266 aa20.29■□□□□ 0.84
BNIP3-201ENST00000368636 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
BNIP3-201ENST00000368636 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.84
BNIP3-201ENST00000368636 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
BNIP3-201ENST00000368636 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
BNIP3-201ENST00000368636 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
BNIP3-201ENST00000368636 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
BNIP3-201ENST00000368636 CUL7Q14999 1698 aa20.22■□□□□ 0.83
BNIP3-201ENST00000368636 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.83
BNIP3-201ENST00000368636 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
BNIP3-201ENST00000368636 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
BNIP3-201ENST00000368636 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
BNIP3-201ENST00000368636 NBR1Q14596 966 aa20.17■□□□□ 0.82
BNIP3-201ENST00000368636 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
BNIP3-201ENST00000368636 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
BNIP3-201ENST00000368636 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.81
BNIP3-201ENST00000368636 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
BNIP3-201ENST00000368636 DEKP35659 375 aaKnown RBP20.13■□□□□ 0.81
BNIP3-201ENST00000368636 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
BNIP3-201ENST00000368636 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
BNIP3-201ENST00000368636 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
BNIP3-201ENST00000368636 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.8
BNIP3-201ENST00000368636 JPH4Q96JJ6 628 aa20.08■□□□□ 0.8
BNIP3-201ENST00000368636 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
BNIP3-201ENST00000368636 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
BNIP3-201ENST00000368636 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
BNIP3-201ENST00000368636 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
BNIP3-201ENST00000368636 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.8
BNIP3-201ENST00000368636 CEP170Q5SW79 1584 aa20.02■□□□□ 0.8
BNIP3-201ENST00000368636 CTTNBP2Q8WZ74 1663 aa20.02■□□□□ 0.8
BNIP3-201ENST00000368636 IQGAP2Q13576 1575 aa19.99■□□□□ 0.79
BNIP3-201ENST00000368636 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
BNIP3-201ENST00000368636 C11orf95C9JLR9 678 aaPredicted RBP19.98■□□□□ 0.79
BNIP3-201ENST00000368636 CHIC2Q9UKJ5 165 aa19.97■□□□□ 0.79
BNIP3-201ENST00000368636 PTPRKQ15262 1439 aa19.96■□□□□ 0.79
BNIP3-201ENST00000368636 MRS2Q9HD23 443 aa19.95■□□□□ 0.78
BNIP3-201ENST00000368636 FOXD1Q16676 465 aa19.94■□□□□ 0.78
BNIP3-201ENST00000368636 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
BNIP3-201ENST00000368636 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
BNIP3-201ENST00000368636 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
BNIP3-201ENST00000368636 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
BNIP3-201ENST00000368636 NUP160Q12769 1436 aa19.92■□□□□ 0.78
BNIP3-201ENST00000368636 DISP1Q96F81 1524 aa19.9■□□□□ 0.78
BNIP3-201ENST00000368636 CHD1O14646 1710 aa19.89■□□□□ 0.77
BNIP3-201ENST00000368636 ANO8Q9HCE9 1232 aaPredicted RBP19.88■□□□□ 0.77
BNIP3-201ENST00000368636 PRKCSHP14314 528 aaPredicted RBP19.88■□□□□ 0.77
BNIP3-201ENST00000368636 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
BNIP3-201ENST00000368636 PRG4Q92954 1404 aaPredicted RBP19.87■□□□□ 0.77
BNIP3-201ENST00000368636 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
BNIP3-201ENST00000368636 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms