RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 PLCB2Q00722 1185 aa17.78■□□□□ 0.44
EDEM3-202ENST00000367512 ARID4BQ4LE39 1312 aaPredicted RBP17.77■□□□□ 0.44
EDEM3-202ENST00000367512 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.43
EDEM3-202ENST00000367512 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
EDEM3-202ENST00000367512 BECN1Q14457 450 aa17.75■□□□□ 0.43
EDEM3-202ENST00000367512 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
EDEM3-202ENST00000367512 MIER1Q8N108 512 aa17.74■□□□□ 0.43
EDEM3-202ENST00000367512 GOLGA6L22H0YM25 854 aa17.72■□□□□ 0.43
EDEM3-202ENST00000367512 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
EDEM3-202ENST00000367512 KDM2AQ9Y2K7 1162 aa17.72■□□□□ 0.43
EDEM3-202ENST00000367512 ESF1Q9H501 851 aaKnown RBP17.72■□□□□ 0.43
EDEM3-202ENST00000367512 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
EDEM3-202ENST00000367512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
EDEM3-202ENST00000367512 CHIC2Q9UKJ5 165 aa17.67■□□□□ 0.42
EDEM3-202ENST00000367512 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
EDEM3-202ENST00000367512 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
EDEM3-202ENST00000367512 ARID3AQ99856 593 aa17.65■□□□□ 0.42
EDEM3-202ENST00000367512 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
EDEM3-202ENST00000367512 RGS3P49796 1198 aa17.55■□□□□ 0.4
EDEM3-202ENST00000367512 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
EDEM3-202ENST00000367512 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
EDEM3-202ENST00000367512 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
EDEM3-202ENST00000367512 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
EDEM3-202ENST00000367512 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
EDEM3-202ENST00000367512 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
EDEM3-202ENST00000367512 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
EDEM3-202ENST00000367512 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
EDEM3-202ENST00000367512 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
EDEM3-202ENST00000367512 DEKP35659 375 aaKnown RBP17.45■□□□□ 0.38
EDEM3-202ENST00000367512 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
EDEM3-202ENST00000367512 FTSJ3Q8IY81 847 aaKnown RBP17.44■□□□□ 0.38
EDEM3-202ENST00000367512 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
EDEM3-202ENST00000367512 CLSTN1O94985 981 aa17.4■□□□□ 0.38
EDEM3-202ENST00000367512 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
EDEM3-202ENST00000367512 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.37
EDEM3-202ENST00000367512 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
EDEM3-202ENST00000367512 FGD1P98174 961 aa17.38■□□□□ 0.37
EDEM3-202ENST00000367512 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
EDEM3-202ENST00000367512 B4GALNT3Q6L9W6 998 aa17.37■□□□□ 0.37
EDEM3-202ENST00000367512 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.37
EDEM3-202ENST00000367512 KCNJ4P48050 445 aa17.32■□□□□ 0.36
EDEM3-202ENST00000367512 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
EDEM3-202ENST00000367512 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
EDEM3-202ENST00000367512 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
EDEM3-202ENST00000367512 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
EDEM3-202ENST00000367512 NRDCO43847 1150 aa17.29■□□□□ 0.36
EDEM3-202ENST00000367512 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
EDEM3-202ENST00000367512 TNNT3P45378 269 aaPredicted RBP17.28■□□□□ 0.36
EDEM3-202ENST00000367512 PDE4CQ08493 712 aa17.27■□□□□ 0.36
EDEM3-202ENST00000367512 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
EDEM3-202ENST00000367512 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
EDEM3-202ENST00000367512 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
EDEM3-202ENST00000367512 NPHP1O15259 732 aa17.24■□□□□ 0.35
EDEM3-202ENST00000367512 PPP1R15AO75807 674 aaPredicted RBP17.24■□□□□ 0.35
EDEM3-202ENST00000367512 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
EDEM3-202ENST00000367512 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
EDEM3-202ENST00000367512 L1TD1Q5T7N2 865 aaKnown RBP17.22■□□□□ 0.35
EDEM3-202ENST00000367512 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
EDEM3-202ENST00000367512 TSPY4P0CV99 314 aa17.2■□□□□ 0.34
EDEM3-202ENST00000367512 TSPY10P0CW01 314 aa17.2■□□□□ 0.34
EDEM3-202ENST00000367512 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
EDEM3-202ENST00000367512 ISY1Q9ULR0 285 aaKnown RBP17.2■□□□□ 0.34
EDEM3-202ENST00000367512 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
EDEM3-202ENST00000367512 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
EDEM3-202ENST00000367512 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
EDEM3-202ENST00000367512 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
EDEM3-202ENST00000367512 APBB1O00213 710 aa17.17■□□□□ 0.34
EDEM3-202ENST00000367512 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
EDEM3-202ENST00000367512 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
EDEM3-202ENST00000367512 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
EDEM3-202ENST00000367512 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
EDEM3-202ENST00000367512 PRM3Q9NNZ6 103 aa17.14■□□□□ 0.33
EDEM3-202ENST00000367512 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
EDEM3-202ENST00000367512 ABCC9O60706 1549 aa17.13■□□□□ 0.33
EDEM3-202ENST00000367512 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
EDEM3-202ENST00000367512 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
EDEM3-202ENST00000367512 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.33
EDEM3-202ENST00000367512 SOX12O15370 315 aa17.08■□□□□ 0.33
EDEM3-202ENST00000367512 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
EDEM3-202ENST00000367512 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
EDEM3-202ENST00000367512 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
EDEM3-202ENST00000367512 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
EDEM3-202ENST00000367512 MCCP23508 829 aa17.04■□□□□ 0.32
EDEM3-202ENST00000367512 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
EDEM3-202ENST00000367512 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
EDEM3-202ENST00000367512 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
EDEM3-202ENST00000367512 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
EDEM3-202ENST00000367512 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
EDEM3-202ENST00000367512 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
EDEM3-202ENST00000367512 SIN3AQ96ST3 1273 aa17■□□□□ 0.31
EDEM3-202ENST00000367512 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
EDEM3-202ENST00000367512 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
EDEM3-202ENST00000367512 GOLGA6L1Q8N7Z2 621 aa16.99■□□□□ 0.31
EDEM3-202ENST00000367512 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
EDEM3-202ENST00000367512 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
EDEM3-202ENST00000367512 FOXD4L5Q5VV16 416 aaPredicted RBP16.96■□□□□ 0.31
EDEM3-202ENST00000367512 FOXD4L4Q8WXT5 416 aaPredicted RBP16.96■□□□□ 0.31
EDEM3-202ENST00000367512 POGKQ9P215 609 aa16.96■□□□□ 0.31
EDEM3-202ENST00000367512 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
EDEM3-202ENST00000367512 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms