RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
TULP4-201ENST00000367094 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
TULP4-201ENST00000367094 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
TULP4-201ENST00000367094 MIER1Q8N108 512 aa13.62□□□□□ -0.23
TULP4-201ENST00000367094 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
TULP4-201ENST00000367094 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
TULP4-201ENST00000367094 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
TULP4-201ENST00000367094 WDR43Q15061 677 aaKnown RBP eCLIP13.6□□□□□ -0.23
TULP4-201ENST00000367094 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
TULP4-201ENST00000367094 CCNB3Q8WWL7 1395 aa13.6□□□□□ -0.23
TULP4-201ENST00000367094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■■□□ 15.7
TULP4-201ENST00000367094 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
TULP4-201ENST00000367094 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
TULP4-201ENST00000367094 SOGA1O94964 1423 aa13.58□□□□□ -0.24
TULP4-201ENST00000367094 CUX2O14529 1486 aa13.58□□□□□ -0.24
TULP4-201ENST00000367094 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
TULP4-201ENST00000367094 EIF5BO60841 1220 aaKnown RBP13.56□□□□□ -0.24
TULP4-201ENST00000367094 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
TULP4-201ENST00000367094 CFDP1Q9UEE9 299 aaPredicted RBP13.56□□□□□ -0.24
TULP4-201ENST00000367094 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
TULP4-201ENST00000367094 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
TULP4-201ENST00000367094 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
TULP4-201ENST00000367094 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
TULP4-201ENST00000367094 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
TULP4-201ENST00000367094 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
TULP4-201ENST00000367094 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
TULP4-201ENST00000367094 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
TULP4-201ENST00000367094 WIZO95785 1651 aa13.49□□□□□ -0.25
TULP4-201ENST00000367094 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
TULP4-201ENST00000367094 SETD5Q9C0A6 1442 aa13.48□□□□□ -0.25
TULP4-201ENST00000367094 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
TULP4-201ENST00000367094 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
TULP4-201ENST00000367094 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
TULP4-201ENST00000367094 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
TULP4-201ENST00000367094 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
TULP4-201ENST00000367094 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
TULP4-201ENST00000367094 TNNT2P45379 298 aaPredicted RBP13.41□□□□□ -0.26
TULP4-201ENST00000367094 SALL2Q9Y467 1007 aaPredicted RBP13.41□□□□□ -0.26
TULP4-201ENST00000367094 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
TULP4-201ENST00000367094 KCNH8Q96L42 1107 aa13.4□□□□□ -0.26
TULP4-201ENST00000367094 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
TULP4-201ENST00000367094 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
TULP4-201ENST00000367094 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.27
TULP4-201ENST00000367094 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
TULP4-201ENST00000367094 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
TULP4-201ENST00000367094 MYH16Q9H6N6 1097 aa13.38□□□□□ -0.27
TULP4-201ENST00000367094 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
TULP4-201ENST00000367094 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
TULP4-201ENST00000367094 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
TULP4-201ENST00000367094 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
TULP4-201ENST00000367094 KANK1Q14678 1352 aa13.35□□□□□ -0.27
TULP4-201ENST00000367094 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
TULP4-201ENST00000367094 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
TULP4-201ENST00000367094 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.28
TULP4-201ENST00000367094 BECN1Q14457 450 aa13.32□□□□□ -0.28
TULP4-201ENST00000367094 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
TULP4-201ENST00000367094 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
TULP4-201ENST00000367094 TMF1P82094 1093 aa13.29□□□□□ -0.28
TULP4-201ENST00000367094 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
TULP4-201ENST00000367094 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
TULP4-201ENST00000367094 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
TULP4-201ENST00000367094 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
TULP4-201ENST00000367094 CHMP4BQ9H444 224 aaKnown RBP13.28□□□□□ -0.28
TULP4-201ENST00000367094 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
TULP4-201ENST00000367094 MS4A1P11836 297 aa13.27□□□□□ -0.29
TULP4-201ENST00000367094 ERICH6BQ5W0A0 696 aa13.27□□□□□ -0.29
TULP4-201ENST00000367094 ANKRD30AQ9BXX3 1397 aa13.26□□□□□ -0.29
TULP4-201ENST00000367094 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
TULP4-201ENST00000367094 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
TULP4-201ENST00000367094 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
TULP4-201ENST00000367094 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
TULP4-201ENST00000367094 RSPH4AQ5TD94 716 aa13.23□□□□□ -0.29
TULP4-201ENST00000367094 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
TULP4-201ENST00000367094 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
TULP4-201ENST00000367094 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
TULP4-201ENST00000367094 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
TULP4-201ENST00000367094 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
TULP4-201ENST00000367094 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
TULP4-201ENST00000367094 NBR1Q14596 966 aa13.19□□□□□ -0.3
TULP4-201ENST00000367094 FTSJ3Q8IY81 847 aaKnown RBP13.19□□□□□ -0.3
TULP4-201ENST00000367094 HDGFP51858 240 aaKnown RBP13.19□□□□□ -0.3
TULP4-201ENST00000367094 PKD2Q13563 968 aa13.19□□□□□ -0.3
TULP4-201ENST00000367094 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
TULP4-201ENST00000367094 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
TULP4-201ENST00000367094 POGKQ9P215 609 aa13.18□□□□□ -0.3
TULP4-201ENST00000367094 RALBP1Q15311 655 aa13.18□□□□□ -0.3
TULP4-201ENST00000367094 CASC1Q6TDU7 716 aa13.18□□□□□ -0.3
TULP4-201ENST00000367094 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
TULP4-201ENST00000367094 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
TULP4-201ENST00000367094 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
TULP4-201ENST00000367094 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
TULP4-201ENST00000367094 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
TULP4-201ENST00000367094 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
TULP4-201ENST00000367094 NRDCO43847 1150 aa13.15□□□□□ -0.3
TULP4-201ENST00000367094 NUP155O75694 1391 aa13.14□□□□□ -0.31
TULP4-201ENST00000367094 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
TULP4-201ENST00000367094 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
TULP4-201ENST00000367094 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
TULP4-201ENST00000367094 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
TULP4-201ENST00000367094 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms