RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
CDC42BPA-203ENST00000366766 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
CDC42BPA-203ENST00000366766 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
CDC42BPA-203ENST00000366766 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
CDC42BPA-203ENST00000366766 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
CDC42BPA-203ENST00000366766 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
CDC42BPA-203ENST00000366766 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
CDC42BPA-203ENST00000366766 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
CDC42BPA-203ENST00000366766 MIER1Q8N108 512 aa15.95■□□□□ 0.14
CDC42BPA-203ENST00000366766 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
CDC42BPA-203ENST00000366766 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
CDC42BPA-203ENST00000366766 CHIC2Q9UKJ5 165 aa15.93■□□□□ 0.14
CDC42BPA-203ENST00000366766 MYH16Q9H6N6 1097 aa15.92■□□□□ 0.14
CDC42BPA-203ENST00000366766 NPM2Q86SE8 214 aaKnown RBP15.91■□□□□ 0.14
CDC42BPA-203ENST00000366766 BECN1Q14457 450 aa15.91■□□□□ 0.14
CDC42BPA-203ENST00000366766 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
CDC42BPA-203ENST00000366766 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
CDC42BPA-203ENST00000366766 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
CDC42BPA-203ENST00000366766 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
CDC42BPA-203ENST00000366766 WIZO95785 1651 aa15.87■□□□□ 0.13
CDC42BPA-203ENST00000366766 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
CDC42BPA-203ENST00000366766 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
CDC42BPA-203ENST00000366766 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
CDC42BPA-203ENST00000366766 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
CDC42BPA-203ENST00000366766 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
CDC42BPA-203ENST00000366766 CARMIL1Q5VZK9 1371 aa15.83■□□□□ 0.13
CDC42BPA-203ENST00000366766 CFAP53Q96M91 514 aa15.83■□□□□ 0.12
CDC42BPA-203ENST00000366766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.122e-6■□□□□ 11.1
CDC42BPA-203ENST00000366766 CUX2O14529 1486 aa15.83■□□□□ 0.12
CDC42BPA-203ENST00000366766 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.12
CDC42BPA-203ENST00000366766 SETD5Q9C0A6 1442 aa15.82■□□□□ 0.12
CDC42BPA-203ENST00000366766 RRP7BPQ9NSQ0 103 aa15.81■□□□□ 0.12
CDC42BPA-203ENST00000366766 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
CDC42BPA-203ENST00000366766 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
CDC42BPA-203ENST00000366766 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
CDC42BPA-203ENST00000366766 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
CDC42BPA-203ENST00000366766 KDM2AQ9Y2K7 1162 aa15.78■□□□□ 0.12
CDC42BPA-203ENST00000366766 MS4A1P11836 297 aa15.77■□□□□ 0.11
CDC42BPA-203ENST00000366766 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
CDC42BPA-203ENST00000366766 GOLGA6L22H0YM25 854 aa15.76■□□□□ 0.11
CDC42BPA-203ENST00000366766 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
CDC42BPA-203ENST00000366766 SOGA1O94964 1423 aa15.75■□□□□ 0.11
CDC42BPA-203ENST00000366766 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
CDC42BPA-203ENST00000366766 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
CDC42BPA-203ENST00000366766 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
CDC42BPA-203ENST00000366766 KANK1Q14678 1352 aa15.72■□□□□ 0.11
CDC42BPA-203ENST00000366766 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
CDC42BPA-203ENST00000366766 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
CDC42BPA-203ENST00000366766 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
CDC42BPA-203ENST00000366766 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
CDC42BPA-203ENST00000366766 CASC1Q6TDU7 716 aa15.69■□□□□ 0.1
CDC42BPA-203ENST00000366766 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
CDC42BPA-203ENST00000366766 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
CDC42BPA-203ENST00000366766 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
CDC42BPA-203ENST00000366766 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
CDC42BPA-203ENST00000366766 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
CDC42BPA-203ENST00000366766 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
CDC42BPA-203ENST00000366766 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
CDC42BPA-203ENST00000366766 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
CDC42BPA-203ENST00000366766 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
CDC42BPA-203ENST00000366766 HAP1P54257 671 aaPredicted RBP15.63■□□□□ 0.09
CDC42BPA-203ENST00000366766 NBR1Q14596 966 aa15.63■□□□□ 0.09
CDC42BPA-203ENST00000366766 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
CDC42BPA-203ENST00000366766 TMF1P82094 1093 aa15.61■□□□□ 0.09
CDC42BPA-203ENST00000366766 TRIM44Q96DX7 344 aaPredicted RBP15.6■□□□□ 0.09
CDC42BPA-203ENST00000366766 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
CDC42BPA-203ENST00000366766 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
CDC42BPA-203ENST00000366766 EIF3AQ14152 1382 aaKnown RBP15.58■□□□□ 0.08
CDC42BPA-203ENST00000366766 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 RSPH4AQ5TD94 716 aa15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 ANKRD30AQ9BXX3 1397 aa15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 KTN1Q86UP2 1357 aaKnown RBP15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
CDC42BPA-203ENST00000366766 RALBP1Q15311 655 aa15.55■□□□□ 0.08
CDC42BPA-203ENST00000366766 KIF21BO75037 1637 aa15.54■□□□□ 0.08
CDC42BPA-203ENST00000366766 CUX1P39880 1505 aa15.53■□□□□ 0.08
CDC42BPA-203ENST00000366766 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
CDC42BPA-203ENST00000366766 RGL3Q3MIN7 710 aa15.53■□□□□ 0.08
CDC42BPA-203ENST00000366766 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
CDC42BPA-203ENST00000366766 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
CDC42BPA-203ENST00000366766 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
CDC42BPA-203ENST00000366766 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
CDC42BPA-203ENST00000366766 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
CDC42BPA-203ENST00000366766 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
CDC42BPA-203ENST00000366766 PTMSP20962 102 aa15.48■□□□□ 0.07
CDC42BPA-203ENST00000366766 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
CDC42BPA-203ENST00000366766 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
CDC42BPA-203ENST00000366766 CALD1Q05682 793 aaKnown RBP15.47■□□□□ 0.07
CDC42BPA-203ENST00000366766 ZRSR1Q15695 479 aaKnown RBP15.46■□□□□ 0.07
CDC42BPA-203ENST00000366766 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
CDC42BPA-203ENST00000366766 POGKQ9P215 609 aa15.45■□□□□ 0.06
CDC42BPA-203ENST00000366766 PDE3BQ13370 1112 aa15.44■□□□□ 0.06
CDC42BPA-203ENST00000366766 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
CDC42BPA-203ENST00000366766 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
CDC42BPA-203ENST00000366766 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
CDC42BPA-203ENST00000366766 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
CDC42BPA-203ENST00000366766 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
CDC42BPA-203ENST00000366766 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
CDC42BPA-203ENST00000366766 NUP155O75694 1391 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms