RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
CDC42BPA-202ENST00000366764 CCER2I3L3R5 266 aa15.79■□□□□ 0.12
CDC42BPA-202ENST00000366764 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
CDC42BPA-202ENST00000366764 ERICH6BQ5W0A0 696 aa15.76■□□□□ 0.11
CDC42BPA-202ENST00000366764 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
CDC42BPA-202ENST00000366764 ARHGAP35Q9NRY4 1499 aa15.75■□□□□ 0.11
CDC42BPA-202ENST00000366764 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
CDC42BPA-202ENST00000366764 FBLN2P98095 1184 aa15.73■□□□□ 0.11
CDC42BPA-202ENST00000366764 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
CDC42BPA-202ENST00000366764 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
CDC42BPA-202ENST00000366764 ANP32BQ92688 251 aaKnown RBP15.72■□□□□ 0.11
CDC42BPA-202ENST00000366764 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
CDC42BPA-202ENST00000366764 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
CDC42BPA-202ENST00000366764 PPP4R2Q9NY27 417 aa15.69■□□□□ 0.1
CDC42BPA-202ENST00000366764 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
CDC42BPA-202ENST00000366764 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
CDC42BPA-202ENST00000366764 CARMIL1Q5VZK9 1371 aa15.66■□□□□ 0.1
CDC42BPA-202ENST00000366764 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
CDC42BPA-202ENST00000366764 CUX2O14529 1486 aa15.66■□□□□ 0.1
CDC42BPA-202ENST00000366764 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
CDC42BPA-202ENST00000366764 WDR43Q15061 677 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDC42BPA-202ENST00000366764 KIF21BO75037 1637 aa15.65■□□□□ 0.1
CDC42BPA-202ENST00000366764 CDCA8Q53HL2 280 aa15.62■□□□□ 0.09
CDC42BPA-202ENST00000366764 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
CDC42BPA-202ENST00000366764 HSP90AA1P07900 732 aaKnown RBP15.6■□□□□ 0.09
CDC42BPA-202ENST00000366764 BECN1Q14457 450 aa15.6■□□□□ 0.09
CDC42BPA-202ENST00000366764 NBR1Q14596 966 aa15.59■□□□□ 0.09
CDC42BPA-202ENST00000366764 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.09
CDC42BPA-202ENST00000366764 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPA-202ENST00000366764 SLC24A1O60721 1099 aa15.58■□□□□ 0.08
CDC42BPA-202ENST00000366764 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
CDC42BPA-202ENST00000366764 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
CDC42BPA-202ENST00000366764 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
CDC42BPA-202ENST00000366764 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
CDC42BPA-202ENST00000366764 CFDP1Q9UEE9 299 aaPredicted RBP15.52■□□□□ 0.07
CDC42BPA-202ENST00000366764 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.07
CDC42BPA-202ENST00000366764 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
CDC42BPA-202ENST00000366764 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
CDC42BPA-202ENST00000366764 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPA-202ENST00000366764 SIN3AQ96ST3 1273 aa15.5■□□□□ 0.07
CDC42BPA-202ENST00000366764 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
CDC42BPA-202ENST00000366764 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
CDC42BPA-202ENST00000366764 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
CDC42BPA-202ENST00000366764 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
CDC42BPA-202ENST00000366764 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
CDC42BPA-202ENST00000366764 CARD11Q9BXL7 1154 aa15.45■□□□□ 0.06
CDC42BPA-202ENST00000366764 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
CDC42BPA-202ENST00000366764 RBM19Q9Y4C8 960 aaKnown RBP15.44■□□□□ 0.06
CDC42BPA-202ENST00000366764 ROCK2O75116 1388 aaKnown RBP15.44■□□□□ 0.06
CDC42BPA-202ENST00000366764 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
CDC42BPA-202ENST00000366764 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
CDC42BPA-202ENST00000366764 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
CDC42BPA-202ENST00000366764 CUX1P39880 1505 aa15.41■□□□□ 0.06
CDC42BPA-202ENST00000366764 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
CDC42BPA-202ENST00000366764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■□□□□ 11.1
CDC42BPA-202ENST00000366764 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
CDC42BPA-202ENST00000366764 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
CDC42BPA-202ENST00000366764 GOLGA6L22H0YM25 854 aa15.38■□□□□ 0.05
CDC42BPA-202ENST00000366764 MS4A1P11836 297 aa15.37■□□□□ 0.05
CDC42BPA-202ENST00000366764 CHMP4BQ9H444 224 aaKnown RBP15.37■□□□□ 0.05
CDC42BPA-202ENST00000366764 RALBP1Q15311 655 aa15.36■□□□□ 0.05
CDC42BPA-202ENST00000366764 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
CDC42BPA-202ENST00000366764 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
CDC42BPA-202ENST00000366764 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
CDC42BPA-202ENST00000366764 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDC42BPA-202ENST00000366764 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.05
CDC42BPA-202ENST00000366764 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.05
CDC42BPA-202ENST00000366764 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
CDC42BPA-202ENST00000366764 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
CDC42BPA-202ENST00000366764 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
CDC42BPA-202ENST00000366764 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
CDC42BPA-202ENST00000366764 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
CDC42BPA-202ENST00000366764 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
CDC42BPA-202ENST00000366764 TMF1P82094 1093 aa15.3■□□□□ 0.04
CDC42BPA-202ENST00000366764 ANKRD30AQ9BXX3 1397 aa15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPA-202ENST00000366764 BCL11AQ9H165 835 aa15.28■□□□□ 0.04
CDC42BPA-202ENST00000366764 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.04
CDC42BPA-202ENST00000366764 ZBED9Q6R2W3 1325 aa15.27■□□□□ 0.04
CDC42BPA-202ENST00000366764 SYNJ1O43426 1573 aa15.27■□□□□ 0.03
CDC42BPA-202ENST00000366764 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.03
CDC42BPA-202ENST00000366764 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
CDC42BPA-202ENST00000366764 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
CDC42BPA-202ENST00000366764 KANK1Q14678 1352 aa15.26■□□□□ 0.03
CDC42BPA-202ENST00000366764 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
CDC42BPA-202ENST00000366764 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
CDC42BPA-202ENST00000366764 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
CDC42BPA-202ENST00000366764 DEKP35659 375 aaKnown RBP15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
CDC42BPA-202ENST00000366764 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
CDC42BPA-202ENST00000366764 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
CDC42BPA-202ENST00000366764 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms