RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 IGF1RP08069 1367 aa2.65□□□□□ -1.98
RNU1-42P-201ENST00000364033 CLASP1Q7Z460 1538 aa2.65□□□□□ -1.99
RNU1-42P-201ENST00000364033 ABCA10Q8WWZ4 1543 aa2.65□□□□□ -1.99
RNU1-42P-201ENST00000364033 FAM9AQ8IZU1 332 aaPredicted RBP2.65□□□□□ -1.99
RNU1-42P-201ENST00000364033 FHAD1B1AJZ9 1412 aa2.65□□□□□ -1.99
RNU1-42P-201ENST00000364033 GRIN2AQ12879 1464 aa2.65□□□□□ -1.99
RNU1-42P-201ENST00000364033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.64□□□□□ -1.99
RNU1-42P-201ENST00000364033 HNRNPUL2Q1KMD3 747 aaKnown RBP2.64□□□□□ -1.99
RNU1-42P-201ENST00000364033 PTPRGP23470 1445 aa2.64□□□□□ -1.99
RNU1-42P-201ENST00000364033 CEP170Q5SW79 1584 aa2.64□□□□□ -1.99
RNU1-42P-201ENST00000364033 CARMIL1Q5VZK9 1371 aa2.63□□□□□ -1.99
RNU1-42P-201ENST00000364033 PRDM2Q13029 1718 aa2.63□□□□□ -1.99
RNU1-42P-201ENST00000364033 NUP160Q12769 1436 aa2.63□□□□□ -1.99
RNU1-42P-201ENST00000364033 RUSC2Q8N2Y8 1516 aa2.63□□□□□ -1.99
RNU1-42P-201ENST00000364033 ATP1B4Q9UN42 357 aaPredicted RBP2.62□□□□□ -1.99
RNU1-42P-201ENST00000364033 PBRM1Q86U86 1689 aa2.61□□□□□ -1.99
RNU1-42P-201ENST00000364033 TNIKQ9UKE5 1360 aa2.61□□□□□ -1.99
RNU1-42P-201ENST00000364033 ABCA5Q8WWZ7 1642 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 KIF27Q86VH2 1401 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 ABCC10Q5T3U5 1492 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 COL17A1Q9UMD9 1497 aaPredicted RBP2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 KIAA0586Q9BVV6 1533 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 RAPGEF3O95398 923 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 MLECQ14165 292 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 ADAMTS12P58397 1594 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 ARID4BQ4LE39 1312 aaPredicted RBP2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 TSPOAP1O95153 1857 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 TOP2BQ02880 1626 aa2.6□□□□□ -1.99
RNU1-42P-201ENST00000364033 ASXL2Q76L83 1435 aa2.59□□□□□ -1.99
RNU1-42P-201ENST00000364033 WDR97A6NE52 1622 aa2.59□□□□□ -1.99
RNU1-42P-201ENST00000364033 CARMIL2Q6F5E8 1435 aa2.59□□□□□ -2
RNU1-42P-201ENST00000364033 UACAQ9BZF9 1416 aa2.59□□□□□ -2
RNU1-42P-201ENST00000364033 ERICH3Q5RHP9 1530 aa2.58□□□□□ -2
RNU1-42P-201ENST00000364033 HSPA2P54652 639 aa2.58□□□□□ -2
RNU1-42P-201ENST00000364033 CSRNP3Q8WYN3 585 aa2.58□□□□□ -2
RNU1-42P-201ENST00000364033 MYT1LQ9UL68 1186 aa2.58□□□□□ -2
RNU1-42P-201ENST00000364033 ADCY10Q96PN6 1610 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 BIVM-ERCC5R4GMW8 1640 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 UBTFP17480 764 aaKnown RBP2.57□□□□□ -2
RNU1-42P-201ENST00000364033 CEBPAP49715 358 aaPredicted RBP2.57□□□□□ -2
RNU1-42P-201ENST00000364033 IFFO2Q5TF58 517 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 CD109Q6YHK3 1445 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 ADGRL1O94910 1474 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 PLB1Q6P1J6 1458 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 SPATA31D1Q6ZQQ2 1576 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 KDM6BO15054 1643 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 SHROOM2Q13796 1616 aa2.57□□□□□ -2
RNU1-42P-201ENST00000364033 KIF13AQ9H1H9 1805 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 PLEKHD1A6NEE1 506 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 RAPGEF2Q9Y4G8 1499 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 EPRSP07814 1512 aaKnown RBP2.56□□□□□ -2
RNU1-42P-201ENST00000364033 ABCC2Q92887 1545 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 DISP1Q96F81 1524 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 DIP2BQ9P265 1576 aa2.56□□□□□ -2
RNU1-42P-201ENST00000364033 MAPKBP1O60336 1514 aa2.55□□□□□ -2
RNU1-42P-201ENST00000364033 HECW2Q9P2P5 1572 aa2.54□□□□□ -2
RNU1-42P-201ENST00000364033 ATP10BO94823 1461 aa2.54□□□□□ -2
RNU1-42P-201ENST00000364033 AFAP1Q8N556 730 aa2.54□□□□□ -2
RNU1-42P-201ENST00000364033 SENP3Q9H4L4 574 aaPredicted RBP2.54□□□□□ -2
RNU1-42P-201ENST00000364033 ZNF777Q9ULD5 760 aaPredicted RBP2.54□□□□□ -2
RNU1-42P-201ENST00000364033 CUL7Q14999 1698 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 IQGAP2Q13576 1575 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 KDM5BQ9UGL1 1544 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 UHRF1BP1LA0JNW5 1464 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 FHOD3Q2V2M9 1422 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 CHIC1Q5VXU3 224 aa2.53□□□□□ -2
RNU1-42P-201ENST00000364033 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 WDR7Q9Y4E6 1490 aa2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 HNRNPMP52272 730 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 CERKQ8TCT0 537 aa2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 ZCCHC11Q5TAX3 1644 aaKnown RBP2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 GLI2P10070 1586 aa2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 UGGT2Q9NYU1 1516 aa2.52□□□□□ -2.01
RNU1-42P-201ENST00000364033 PPRC1Q5VV67 1664 aaKnown RBP2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 KIAA0556O60303 1618 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 EFCAB2Q5VUJ9 269 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 GGT6Q6P531 493 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 ESF1Q9H501 851 aaKnown RBP2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 PTPRMP28827 1452 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 GOLGA3Q08378 1498 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 PRXQ9BXM0 1461 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 AKNAQ7Z591 1439 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 SCAPERQ9BY12 1400 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 YEATS2Q9ULM3 1422 aa2.51□□□□□ -2.01
RNU1-42P-201ENST00000364033 NCKAP5LQ9HCH0 1330 aa2.5□□□□□ -2.01
RNU1-42P-201ENST00000364033 ABCA8O94911 1581 aa2.5□□□□□ -2.01
RNU1-42P-201ENST00000364033 LOC105371045A0A1W2PR82 267 aa2.5□□□□□ -2.01
RNU1-42P-201ENST00000364033 MAGI3Q5TCQ9 1506 aa2.5□□□□□ -2.01
RNU1-42P-201ENST00000364033 MAP3K4Q9Y6R4 1608 aa2.5□□□□□ -2.01
RNU1-42P-201ENST00000364033 ZNF644Q9H582 1327 aaPredicted RBP2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 SCAF1Q9H7N4 1312 aaKnown RBP2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 PIP4K2BP78356 416 aa2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 CDK11AQ9UQ88 783 aaPredicted RBP2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 DENND4BO75064 1496 aaPredicted RBP2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 KIF21BO75037 1637 aa2.49□□□□□ -2.01
RNU1-42P-201ENST00000364033 CDK13Q14004 1512 aaKnown RBP2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 ARAP3Q8WWN8 1544 aa2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 FANCAO15360 1455 aa2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 NUP153P49790 1475 aaKnown RBP2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 UBAP1LF5GYI3 381 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms