RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 VSIG10Q8N0Z9 540 aa8.85□□□□□ -0.99
RNU6-28P-201ENST00000362378 CREBZFQ9NS37 354 aa8.83□□□□□ -1
RNU6-28P-201ENST00000362378 PRR29P0C7W0 189 aa8.82□□□□□ -1
RNU6-28P-201ENST00000362378 CLEC11AQ9Y240 323 aa8.82□□□□□ -1
RNU6-28P-201ENST00000362378 MNX1P50219 401 aaPredicted RBP8.81□□□□□ -1
RNU6-28P-201ENST00000362378 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
RNU6-28P-201ENST00000362378 GABBR2O75899 941 aa8.79□□□□□ -1
RNU6-28P-201ENST00000362378 CHGAP10645 457 aaKnown RBP8.79□□□□□ -1
RNU6-28P-201ENST00000362378 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
RNU6-28P-201ENST00000362378 DCAF8Q5TAQ9 597 aa8.77□□□□□ -1.01
RNU6-28P-201ENST00000362378 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
RNU6-28P-201ENST00000362378 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
RNU6-28P-201ENST00000362378 CFAP44Q96MT7 982 aa8.77□□□□□ -1.01
RNU6-28P-201ENST00000362378 PCDH10Q9P2E7 1040 aa8.76□□□□□ -1.01
RNU6-28P-201ENST00000362378 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
RNU6-28P-201ENST00000362378 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
RNU6-28P-201ENST00000362378 FAM212AQ96EL1 285 aa8.74□□□□□ -1.01
RNU6-28P-201ENST00000362378 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
RNU6-28P-201ENST00000362378 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
RNU6-28P-201ENST00000362378 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
RNU6-28P-201ENST00000362378 TAOK2Q9UL54 1235 aa8.72□□□□□ -1.01
RNU6-28P-201ENST00000362378 POTEMA6NI47 508 aa8.71□□□□□ -1.02
RNU6-28P-201ENST00000362378 BCANQ96GW7 911 aa8.71□□□□□ -1.02
RNU6-28P-201ENST00000362378 RASEFQ8IZ41 740 aa8.7□□□□□ -1.02
RNU6-28P-201ENST00000362378 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
RNU6-28P-201ENST00000362378 C19orf67A6NJJ6 358 aa8.66□□□□□ -1.02
RNU6-28P-201ENST00000362378 VGFO15240 615 aaPredicted RBP8.66□□□□□ -1.02
RNU6-28P-201ENST00000362378 SGIP1Q9BQI5 828 aa8.66□□□□□ -1.02
RNU6-28P-201ENST00000362378 POTEGQ6S5H5 508 aa8.64□□□□□ -1.03
RNU6-28P-201ENST00000362378 NKX1-1Q15270 411 aaPredicted RBP8.63□□□□□ -1.03
RNU6-28P-201ENST00000362378 STK25O00506 426 aa8.6□□□□□ -1.03
RNU6-28P-201ENST00000362378 GTPBP6O43824 516 aaPredicted RBP8.59□□□□□ -1.03
RNU6-28P-201ENST00000362378 PYGBP11216 843 aa8.59□□□□□ -1.03
RNU6-28P-201ENST00000362378 CHADLQ6NUI6 762 aa8.58□□□□□ -1.04
RNU6-28P-201ENST00000362378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.57□□□□□ -1.04
RNU6-28P-201ENST00000362378 ZFP91Q96JP5 570 aaPredicted RBP8.57□□□□□ -1.04
RNU6-28P-201ENST00000362378 FARP1Q9Y4F1 1045 aaPredicted RBP8.57□□□□□ -1.04
RNU6-28P-201ENST00000362378 POTEIP0CG38 1075 aa8.56□□□□□ -1.04
RNU6-28P-201ENST00000362378 BCL11BQ9C0K0 894 aaPredicted RBP8.55□□□□□ -1.04
RNU6-28P-201ENST00000362378 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
RNU6-28P-201ENST00000362378 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
RNU6-28P-201ENST00000362378 TSPYL2Q9H2G4 693 aaPredicted RBP8.52□□□□□ -1.05
RNU6-28P-201ENST00000362378 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
RNU6-28P-201ENST00000362378 PRKAR2AP13861 404 aaKnown RBP8.51□□□□□ -1.05
RNU6-28P-201ENST00000362378 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
RNU6-28P-201ENST00000362378 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
RNU6-28P-201ENST00000362378 PDAP1Q13442 181 aaKnown RBP8.47□□□□□ -1.05
RNU6-28P-201ENST00000362378 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
RNU6-28P-201ENST00000362378 ZNF579Q8NAF0 562 aaKnown RBP8.45□□□□□ -1.06
RNU6-28P-201ENST00000362378 PCDHB8Q9UN66 801 aa8.44□□□□□ -1.06
RNU6-28P-201ENST00000362378 PCDHB13Q9Y5F0 798 aa8.44□□□□□ -1.06
RNU6-28P-201ENST00000362378 CLCN6P51797 869 aa8.42□□□□□ -1.06
RNU6-28P-201ENST00000362378 PAK3O75914 559 aaPredicted RBP8.41□□□□□ -1.06
RNU6-28P-201ENST00000362378 PSEN1P49768 467 aa8.41□□□□□ -1.06
RNU6-28P-201ENST00000362378 NBR1Q14596 966 aa8.41□□□□□ -1.06
RNU6-28P-201ENST00000362378 TPRNQ4KMQ1 711 aa8.4□□□□□ -1.06
RNU6-28P-201ENST00000362378 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
RNU6-28P-201ENST00000362378 MAP3K13O43283 966 aa8.36□□□□□ -1.07
RNU6-28P-201ENST00000362378 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
RNU6-28P-201ENST00000362378 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
RNU6-28P-201ENST00000362378 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
RNU6-28P-201ENST00000362378 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
RNU6-28P-201ENST00000362378 SOX12O15370 315 aa8.31□□□□□ -1.08
RNU6-28P-201ENST00000362378 P3H3Q8IVL6 736 aa8.3□□□□□ -1.08
RNU6-28P-201ENST00000362378 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
RNU6-28P-201ENST00000362378 FBXO22Q8NEZ5 403 aa8.3□□□□□ -1.08
RNU6-28P-201ENST00000362378 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
RNU6-28P-201ENST00000362378 CD44P16070 742 aaKnown RBP8.29□□□□□ -1.08
RNU6-28P-201ENST00000362378 NLRP6P59044 892 aa8.29□□□□□ -1.08
RNU6-28P-201ENST00000362378 CABP2Q9NPB3 220 aa8.28□□□□□ -1.08
RNU6-28P-201ENST00000362378 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
RNU6-28P-201ENST00000362378 PPP1R37O75864 691 aa8.26□□□□□ -1.09
RNU6-28P-201ENST00000362378 PHF12Q96QT6 1004 aa8.26□□□□□ -1.09
RNU6-28P-201ENST00000362378 PHF8Q9UPP1 1060 aa8.25□□□□□ -1.09
RNU6-28P-201ENST00000362378 POTEB2H3BUK9 544 aa8.24□□□□□ -1.09
RNU6-28P-201ENST00000362378 KCNV2Q8TDN2 545 aa8.23□□□□□ -1.09
RNU6-28P-201ENST00000362378 MS4A4AQ96JQ5 239 aa8.19□□□□□ -1.1
RNU6-28P-201ENST00000362378 TMEM106CQ9BVX2 250 aa8.19□□□□□ -1.1
RNU6-28P-201ENST00000362378 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
RNU6-28P-201ENST00000362378 ARHGEF1Q92888 912 aaKnown RBP8.17□□□□□ -1.1
RNU6-28P-201ENST00000362378 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
RNU6-28P-201ENST00000362378 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
RNU6-28P-201ENST00000362378 GOLGA2Q08379 1002 aa8.15□□□□□ -1.1
RNU6-28P-201ENST00000362378 E2F4Q16254 413 aa8.15□□□□□ -1.1
RNU6-28P-201ENST00000362378 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
RNU6-28P-201ENST00000362378 TIE1P35590 1138 aa8.14□□□□□ -1.11
RNU6-28P-201ENST00000362378 PDE4AP27815 886 aa8.13□□□□□ -1.11
RNU6-28P-201ENST00000362378 MKRN3Q13064 507 aaKnown RBP8.13□□□□□ -1.11
RNU6-28P-201ENST00000362378 MFSD10Q14728 455 aa8.13□□□□□ -1.11
RNU6-28P-201ENST00000362378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU6-28P-201ENST00000362378 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
RNU6-28P-201ENST00000362378 FAM163AQ96GL9 167 aaPredicted RBP8.12□□□□□ -1.11
RNU6-28P-201ENST00000362378 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
RNU6-28P-201ENST00000362378 TTLL13PA6NNM8 815 aa8.11□□□□□ -1.11
RNU6-28P-201ENST00000362378 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
RNU6-28P-201ENST00000362378 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
RNU6-28P-201ENST00000362378 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
RNU6-28P-201ENST00000362378 BMP2KQ9NSY1 1161 aaPredicted RBP8.08□□□□□ -1.12
RNU6-28P-201ENST00000362378 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
RNU6-28P-201ENST00000362378 TULP1O00294 542 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms