RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 CFAP43Q8NDM7 1665 aa35.89■■■■□ 3.34
CROCCP2-201ENST00000362058 URB2Q14146 1524 aaKnown RBP35.85■■■■□ 3.33
CROCCP2-201ENST00000362058 LRRC9Q6ZRR7 1453 aa35.84■■■■□ 3.33
CROCCP2-201ENST00000362058 PCF11O94913 1555 aaKnown RBP35.81■■■■□ 3.32
CROCCP2-201ENST00000362058 SCAF1Q9H7N4 1312 aaKnown RBP35.81■■■■□ 3.32
CROCCP2-201ENST00000362058 PDS5BQ9NTI5 1447 aa35.79■■■■□ 3.32
CROCCP2-201ENST00000362058 ACIN1Q9UKV3 1341 aaKnown RBP35.75■■■■□ 3.31
CROCCP2-201ENST00000362058 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
CROCCP2-201ENST00000362058 FYCO1Q9BQS8 1478 aa35.74■■■■□ 3.31
CROCCP2-201ENST00000362058 CENPBP07199 599 aaPredicted RBP35.74■■■■□ 3.31
CROCCP2-201ENST00000362058 AQRO60306 1485 aaKnown RBP eCLIP35.72■■■■□ 3.311e-10■■■■■ 30.9
CROCCP2-201ENST00000362058 FHOD3Q2V2M9 1422 aa35.68■■■■□ 3.3
CROCCP2-201ENST00000362058 CASKIN1Q8WXD9 1431 aa35.67■■■■□ 3.3
CROCCP2-201ENST00000362058 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
CROCCP2-201ENST00000362058 P3H3Q8IVL6 736 aa35.64■■■■□ 3.3
CROCCP2-201ENST00000362058 GAPVD1Q14C86 1478 aa35.62■■■■□ 3.29
CROCCP2-201ENST00000362058 PHLDB1Q86UU1 1377 aa35.61■■■■□ 3.29
CROCCP2-201ENST00000362058 NEUROD1Q13562 356 aa35.59■■■■□ 3.29
CROCCP2-201ENST00000362058 FMN1Q68DA7 1419 aa35.59■■■■□ 3.29
CROCCP2-201ENST00000362058 ITGAEP38570 1179 aa35.59■■■■□ 3.29
CROCCP2-201ENST00000362058 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
CROCCP2-201ENST00000362058 RAB3GAP2Q9H2M9 1393 aa35.54■■■■□ 3.28
CROCCP2-201ENST00000362058 SAMD9Q5K651 1589 aa35.53■■■■□ 3.28
CROCCP2-201ENST00000362058 ATP1B4Q9UN42 357 aaPredicted RBP35.51■■■■□ 3.28
CROCCP2-201ENST00000362058 SETD5Q9C0A6 1442 aa35.5■■■■□ 3.27
CROCCP2-201ENST00000362058 TARBP1Q13395 1621 aaKnown RBP35.49■■■■□ 3.27
CROCCP2-201ENST00000362058 SNAPC4Q5SXM2 1469 aa35.45■■■■□ 3.27
CROCCP2-201ENST00000362058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.45■■■■□ 3.274e-9■■□□□ 12.9
CROCCP2-201ENST00000362058 MIER1Q8N108 512 aa35.42■■■■□ 3.26
CROCCP2-201ENST00000362058 FAM50AQ14320 339 aaKnown RBP35.42■■■■□ 3.26
CROCCP2-201ENST00000362058 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
CROCCP2-201ENST00000362058 MAPKBP1O60336 1514 aa35.37■■■■□ 3.25
CROCCP2-201ENST00000362058 THOC2Q8NI27 1593 aaKnown RBP35.37■■■■□ 3.25
CROCCP2-201ENST00000362058 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
CROCCP2-201ENST00000362058 LRRIQ1Q96JM4 1722 aa35.3■■■■□ 3.24
CROCCP2-201ENST00000362058 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
CROCCP2-201ENST00000362058 MTUS2Q5JR59 1369 aa35.26■■■■□ 3.24
CROCCP2-201ENST00000362058 FGD6Q6ZV73 1430 aa35.26■■■■□ 3.24
CROCCP2-201ENST00000362058 MRC2Q9UBG0 1479 aa35.25■■■■□ 3.23
CROCCP2-201ENST00000362058 GTF3C3Q9Y5Q9 886 aa35.22■■■■□ 3.23
CROCCP2-201ENST00000362058 SUPT6HQ7KZ85 1726 aaKnown RBP35.2■■■■□ 3.23
CROCCP2-201ENST00000362058 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
CROCCP2-201ENST00000362058 EHBP1L1Q8N3D4 1523 aa35.18■■■■□ 3.22
CROCCP2-201ENST00000362058 YTHDC1Q96MU7 727 aaKnown RBP35.17■■■■□ 3.22
CROCCP2-201ENST00000362058 IQGAP2Q13576 1575 aa35.14■■■■□ 3.22
CROCCP2-201ENST00000362058 CCDC18Q5T9S5 1454 aa35.13■■■■□ 3.21
CROCCP2-201ENST00000362058 NCOA2Q15596 1464 aa35.12■■■■□ 3.21
CROCCP2-201ENST00000362058 MYOM3Q5VTT5 1437 aa35.09■■■■□ 3.21
CROCCP2-201ENST00000362058 HECW1Q76N89 1606 aa35.09■■■■□ 3.21
CROCCP2-201ENST00000362058 TIMELESSQ9UNS1 1208 aa35.08■■■■□ 3.21
CROCCP2-201ENST00000362058 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
CROCCP2-201ENST00000362058 PELP1Q8IZL8 1130 aaKnown RBP35.03■■■■□ 3.2
CROCCP2-201ENST00000362058 UGGT2Q9NYU1 1516 aa35.02■■■■□ 3.2
CROCCP2-201ENST00000362058 HFM1A2PYH4 1435 aa35.01■■■■□ 3.19
CROCCP2-201ENST00000362058 ARHGEF11O15085 1522 aa35.01■■■■□ 3.19
CROCCP2-201ENST00000362058 WDR62O43379 1518 aa35■■■■□ 3.19
CROCCP2-201ENST00000362058 PTPN23Q9H3S7 1636 aa34.98■■■■□ 3.19
CROCCP2-201ENST00000362058 SIN3AQ96ST3 1273 aa34.94■■■■□ 3.18
CROCCP2-201ENST00000362058 MAGI3Q5TCQ9 1506 aa34.93■■■■□ 3.18
CROCCP2-201ENST00000362058 PTPRKQ15262 1439 aa34.92■■■■□ 3.18
CROCCP2-201ENST00000362058 EPRSP07814 1512 aaKnown RBP34.9■■■■□ 3.18
CROCCP2-201ENST00000362058 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
CROCCP2-201ENST00000362058 TCOF1Q13428 1488 aaKnown RBP34.87■■■■□ 3.17
CROCCP2-201ENST00000362058 ZNF608Q9ULD9 1512 aaPredicted RBP34.85■■■■□ 3.17
CROCCP2-201ENST00000362058 NAIPQ13075 1403 aa34.85■■■■□ 3.17
CROCCP2-201ENST00000362058 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
CROCCP2-201ENST00000362058 GCC2Q8IWJ2 1684 aa34.77■■■■□ 3.16
CROCCP2-201ENST00000362058 PPP1R15AO75807 674 aaPredicted RBP34.76■■■■□ 3.16
CROCCP2-201ENST00000362058 EIF4G3O43432 1585 aaKnown RBP34.76■■■■□ 3.16
CROCCP2-201ENST00000362058 KIAA0556O60303 1618 aa34.76■■■■□ 3.15
CROCCP2-201ENST00000362058 CDK13Q14004 1512 aaKnown RBP34.75■■■■□ 3.15
CROCCP2-201ENST00000362058 MIA2Q96PC5 1412 aa34.75■■■■□ 3.15
CROCCP2-201ENST00000362058 AKNAQ7Z591 1439 aa34.72■■■■□ 3.15
CROCCP2-201ENST00000362058 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
CROCCP2-201ENST00000362058 TONSLQ96HA7 1378 aa34.7■■■■□ 3.15
CROCCP2-201ENST00000362058 DISP1Q96F81 1524 aa34.69■■■■□ 3.14
CROCCP2-201ENST00000362058 ERCC6Q03468 1493 aa34.64■■■■□ 3.14
CROCCP2-201ENST00000362058 RAPGEF6Q8TEU7 1601 aa34.63■■■■□ 3.13
CROCCP2-201ENST00000362058 MAGI1Q96QZ7 1491 aaPredicted RBP34.63■■■■□ 3.13
CROCCP2-201ENST00000362058 NUP153P49790 1475 aaKnown RBP34.54■■■■□ 3.12
CROCCP2-201ENST00000362058 RRP7BPQ9NSQ0 103 aa34.54■■■■□ 3.12
CROCCP2-201ENST00000362058 CHIC2Q9UKJ5 165 aa34.51■■■■□ 3.12
CROCCP2-201ENST00000362058 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
CROCCP2-201ENST00000362058 DDX10Q13206 875 aaKnown RBP34.5■■■■□ 3.11
CROCCP2-201ENST00000362058 CDK11AQ9UQ88 783 aaPredicted RBP34.5■■■■□ 3.11
CROCCP2-201ENST00000362058 ARID3CA6NKF2 412 aa34.47■■■■□ 3.11
CROCCP2-201ENST00000362058 CEP170Q5SW79 1584 aa34.46■■■■□ 3.11
CROCCP2-201ENST00000362058 DNMT1P26358 1616 aaKnown RBP34.46■■■■□ 3.11
CROCCP2-201ENST00000362058 KDM6BO15054 1643 aa34.44■■■■□ 3.1
CROCCP2-201ENST00000362058 ROCK1Q13464 1354 aa34.44■■■■□ 3.1
CROCCP2-201ENST00000362058 CHMP7Q8WUX9 453 aaPredicted RBP34.43■■■■□ 3.1
CROCCP2-201ENST00000362058 DAPK1P53355 1430 aa34.42■■■■□ 3.1
CROCCP2-201ENST00000362058 TRIM52Q96A61 297 aa34.41■■■■□ 3.1
CROCCP2-201ENST00000362058 KDM5BQ9UGL1 1544 aa34.41■■■■□ 3.1
CROCCP2-201ENST00000362058 DENND4BO75064 1496 aaPredicted RBP34.38■■■■□ 3.09
CROCCP2-201ENST00000362058 ITSN2Q9NZM3 1697 aa34.37■■■■□ 3.09
CROCCP2-201ENST00000362058 TROQ12816 1431 aaPredicted RBP34.35■■■■□ 3.09
CROCCP2-201ENST00000362058 CARMIL2Q6F5E8 1435 aa34.35■■■■□ 3.09
CROCCP2-201ENST00000362058 ABCC5O15440 1437 aa34.33■■■■□ 3.09
CROCCP2-201ENST00000362058 NUP160Q12769 1436 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms