RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ZNF316A6NFI3 1004 aaPredicted RBP39.23■■■■□ 3.87
CUEDC1-201ENST00000360238 ABCA5Q8WWZ7 1642 aa39.2■■■■□ 3.87
CUEDC1-201ENST00000360238 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
CUEDC1-201ENST00000360238 PCF11O94913 1555 aaKnown RBP39.19■■■■□ 3.86
CUEDC1-201ENST00000360238 LRRC9Q6ZRR7 1453 aa39.16■■■■□ 3.86
CUEDC1-201ENST00000360238 DHX57Q6P158 1386 aaKnown RBP39.15■■■■□ 3.86
CUEDC1-201ENST00000360238 KIF21AQ7Z4S6 1674 aa39.12■■■■□ 3.85
CUEDC1-201ENST00000360238 FYCO1Q9BQS8 1478 aa39.07■■■■□ 3.85
CUEDC1-201ENST00000360238 AQRO60306 1485 aaKnown RBP eCLIP39.06■■■■□ 3.84
CUEDC1-201ENST00000360238 FHOD3Q2V2M9 1422 aa39■■■■□ 3.83
CUEDC1-201ENST00000360238 GAPVD1Q14C86 1478 aa38.99■■■■□ 3.83
CUEDC1-201ENST00000360238 CASKIN1Q8WXD9 1431 aa38.98■■■■□ 3.83
CUEDC1-201ENST00000360238 TARBP1Q13395 1621 aaKnown RBP38.93■■■■□ 3.82
CUEDC1-201ENST00000360238 SAMD9Q5K651 1589 aa38.91■■■■□ 3.82
CUEDC1-201ENST00000360238 TDRD9Q8NDG6 1382 aaKnown RBP38.89■■■■□ 3.82
CUEDC1-201ENST00000360238 PHLDB1Q86UU1 1377 aa38.89■■■■□ 3.82
CUEDC1-201ENST00000360238 FMN1Q68DA7 1419 aa38.89■■■■□ 3.82
CUEDC1-201ENST00000360238 P3H3Q8IVL6 736 aa38.87■■■■□ 3.81
CUEDC1-201ENST00000360238 DNAJC5BQ9UF47 199 aa38.84■■■■□ 3.81
CUEDC1-201ENST00000360238 SNAPC4Q5SXM2 1469 aa38.81■■■■□ 3.8
CUEDC1-201ENST00000360238 SCAF1Q9H7N4 1312 aaKnown RBP38.8■■■■□ 3.8
CUEDC1-201ENST00000360238 PBRM1Q86U86 1689 aa38.77■■■■□ 3.8
CUEDC1-201ENST00000360238 RAB3GAP2Q9H2M9 1393 aa38.75■■■■□ 3.79
CUEDC1-201ENST00000360238 ACIN1Q9UKV3 1341 aaKnown RBP38.74■■■■□ 3.79
CUEDC1-201ENST00000360238 ITGAEP38570 1179 aa38.72■■■■□ 3.79
CUEDC1-201ENST00000360238 THOC2Q8NI27 1593 aaKnown RBP38.72■■■■□ 3.79
CUEDC1-201ENST00000360238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.7■■■■□ 3.79
CUEDC1-201ENST00000360238 SETD5Q9C0A6 1442 aa38.7■■■■□ 3.79
CUEDC1-201ENST00000360238 CENPBP07199 599 aaPredicted RBP38.68■■■■□ 3.78
CUEDC1-201ENST00000360238 ATP1B4Q9UN42 357 aaPredicted RBP38.66■■■■□ 3.78
CUEDC1-201ENST00000360238 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
CUEDC1-201ENST00000360238 LRRIQ1Q96JM4 1722 aa38.65■■■■□ 3.78
CUEDC1-201ENST00000360238 MAPKBP1O60336 1514 aa38.63■■■■□ 3.77
CUEDC1-201ENST00000360238 GRIN2BQ13224 1484 aa38.61■■■■□ 3.77
CUEDC1-201ENST00000360238 ADAMTS12P58397 1594 aa38.59■■■■□ 3.77
CUEDC1-201ENST00000360238 NEUROD1Q13562 356 aa38.59■■■■□ 3.77
CUEDC1-201ENST00000360238 FAM50AQ14320 339 aaKnown RBP38.57■■■■□ 3.76
CUEDC1-201ENST00000360238 FGD6Q6ZV73 1430 aa38.51■■■■□ 3.76
CUEDC1-201ENST00000360238 MTUS2Q5JR59 1369 aa38.49■■■■□ 3.75
CUEDC1-201ENST00000360238 IQGAP2Q13576 1575 aa38.48■■■■□ 3.75
CUEDC1-201ENST00000360238 EHBP1L1Q8N3D4 1523 aa38.47■■■■□ 3.75
CUEDC1-201ENST00000360238 SUPT6HQ7KZ85 1726 aaKnown RBP38.46■■■■□ 3.75
CUEDC1-201ENST00000360238 MIER1Q8N108 512 aa38.46■■■■□ 3.75
CUEDC1-201ENST00000360238 WDR62O43379 1518 aa38.42■■■■□ 3.74
CUEDC1-201ENST00000360238 CCDC18Q5T9S5 1454 aa38.41■■■■□ 3.74
CUEDC1-201ENST00000360238 IFT140Q96RY7 1462 aa38.39■■■■□ 3.74
CUEDC1-201ENST00000360238 HECW1Q76N89 1606 aa38.38■■■■□ 3.73
CUEDC1-201ENST00000360238 NCOA2Q15596 1464 aa38.37■■■■□ 3.73
CUEDC1-201ENST00000360238 MYOM3Q5VTT5 1437 aa38.34■■■■□ 3.73
CUEDC1-201ENST00000360238 ARHGEF11O15085 1522 aa38.32■■■■□ 3.72
CUEDC1-201ENST00000360238 UGGT2Q9NYU1 1516 aa38.3■■■■□ 3.72
CUEDC1-201ENST00000360238 MAGI3Q5TCQ9 1506 aa38.24■■■■□ 3.71
CUEDC1-201ENST00000360238 HFM1A2PYH4 1435 aa38.23■■■■□ 3.71
CUEDC1-201ENST00000360238 PTPN23Q9H3S7 1636 aa38.22■■■■□ 3.71
CUEDC1-201ENST00000360238 ZNF608Q9ULD9 1512 aaPredicted RBP38.21■■■■□ 3.71
CUEDC1-201ENST00000360238 TIMELESSQ9UNS1 1208 aa38.17■■■■□ 3.7
CUEDC1-201ENST00000360238 EPRSP07814 1512 aaKnown RBP38.17■■■■□ 3.7
CUEDC1-201ENST00000360238 PTPRKQ15262 1439 aa38.15■■■■□ 3.7
CUEDC1-201ENST00000360238 GTF3C3Q9Y5Q9 886 aa38.14■■■■□ 3.7
CUEDC1-201ENST00000360238 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
CUEDC1-201ENST00000360238 YTHDC1Q96MU7 727 aaKnown RBP38.12■■■■□ 3.69
CUEDC1-201ENST00000360238 TCOF1Q13428 1488 aaKnown RBP38.12■■■■□ 3.69
CUEDC1-201ENST00000360238 KIAA0586Q9BVV6 1533 aa38.11■■■■□ 3.69
CUEDC1-201ENST00000360238 KIAA0556O60303 1618 aa38.08■■■■□ 3.69
CUEDC1-201ENST00000360238 UACAQ9BZF9 1416 aa38.07■■■■□ 3.69
CUEDC1-201ENST00000360238 NAIPQ13075 1403 aa38.05■■■■□ 3.68
CUEDC1-201ENST00000360238 GRIN2AQ12879 1464 aa38.03■■■■□ 3.68
CUEDC1-201ENST00000360238 SIN3AQ96ST3 1273 aa38.03■■■■□ 3.68
CUEDC1-201ENST00000360238 CDK13Q14004 1512 aaKnown RBP38.02■■■■□ 3.68
CUEDC1-201ENST00000360238 GCC2Q8IWJ2 1684 aa38.02■■■■□ 3.68
CUEDC1-201ENST00000360238 DISP1Q96F81 1524 aa38■■■■□ 3.67
CUEDC1-201ENST00000360238 MIA2Q96PC5 1412 aa37.97■■■■□ 3.67
CUEDC1-201ENST00000360238 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
CUEDC1-201ENST00000360238 MAGI1Q96QZ7 1491 aaPredicted RBP37.95■■■■□ 3.67
CUEDC1-201ENST00000360238 AKNAQ7Z591 1439 aa37.95■■■■□ 3.67
CUEDC1-201ENST00000360238 RAPGEF6Q8TEU7 1601 aa37.9■■■■□ 3.66
CUEDC1-201ENST00000360238 PPP1R15AO75807 674 aaPredicted RBP37.83■■■■□ 3.65
CUEDC1-201ENST00000360238 NUP153P49790 1475 aaKnown RBP37.82■■■■□ 3.65
CUEDC1-201ENST00000360238 SYNJ2O15056 1496 aa37.82■■■■□ 3.64
CUEDC1-201ENST00000360238 CEP170Q5SW79 1584 aa37.79■■■■□ 3.64
CUEDC1-201ENST00000360238 TONSLQ96HA7 1378 aa37.78■■■■□ 3.64
CUEDC1-201ENST00000360238 PELP1Q8IZL8 1130 aaKnown RBP37.76■■■■□ 3.64
CUEDC1-201ENST00000360238 DNMT1P26358 1616 aaKnown RBP37.69■■■■□ 3.62
CUEDC1-201ENST00000360238 KDM6BO15054 1643 aa37.66■■■■□ 3.62
CUEDC1-201ENST00000360238 NUP160Q12769 1436 aa37.64■■■■□ 3.62
CUEDC1-201ENST00000360238 RRP7BPQ9NSQ0 103 aa37.64■■■■□ 3.62
CUEDC1-201ENST00000360238 ROCK1Q13464 1354 aa37.62■■■■□ 3.61
CUEDC1-201ENST00000360238 ARID3CA6NKF2 412 aa37.62■■■■□ 3.61
CUEDC1-201ENST00000360238 CHMP7Q8WUX9 453 aaPredicted RBP37.62■■■■□ 3.61
CUEDC1-201ENST00000360238 CDK11AQ9UQ88 783 aaPredicted RBP37.62■■■■□ 3.61
CUEDC1-201ENST00000360238 DAPK1P53355 1430 aa37.61■■■■□ 3.61
CUEDC1-201ENST00000360238 KDM5BQ9UGL1 1544 aa37.61■■■■□ 3.61
CUEDC1-201ENST00000360238 CHIC2Q9UKJ5 165 aa37.6■■■■□ 3.61
CUEDC1-201ENST00000360238 DENND4BO75064 1496 aaPredicted RBP37.6■■■■□ 3.61
CUEDC1-201ENST00000360238 ITSN2Q9NZM3 1697 aa37.6■■■■□ 3.61
CUEDC1-201ENST00000360238 ADCY10Q96PN6 1610 aa37.6■■■■□ 3.61
CUEDC1-201ENST00000360238 TROQ12816 1431 aaPredicted RBP37.56■■■■□ 3.6
CUEDC1-201ENST00000360238 CARMIL2Q6F5E8 1435 aa37.55■■■■□ 3.6
CUEDC1-201ENST00000360238 ABCC5O15440 1437 aa37.51■■■■□ 3.6
CUEDC1-201ENST00000360238 PLB1Q6P1J6 1458 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms