RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CASC1Q6TDU7 716 aa22.77■■□□□ 1.24
CACNA1A-201ENST00000360228 GOLGA6L6A8MZA4 724 aa22.76■■□□□ 1.23
CACNA1A-201ENST00000360228 PLCB2Q00722 1185 aa22.75■■□□□ 1.23
CACNA1A-201ENST00000360228 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
CACNA1A-201ENST00000360228 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
CACNA1A-201ENST00000360228 ZBTB7CA1YPR0 619 aa22.74■■□□□ 1.23
CACNA1A-201ENST00000360228 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
CACNA1A-201ENST00000360228 CLSTN1O94985 981 aa22.65■■□□□ 1.22
CACNA1A-201ENST00000360228 CHAF1AQ13111 956 aaPredicted RBP22.64■■□□□ 1.22
CACNA1A-201ENST00000360228 C14orf37Q86TY3 774 aa22.64■■□□□ 1.21
CACNA1A-201ENST00000360228 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
CACNA1A-201ENST00000360228 NRDCO43847 1150 aa22.59■■□□□ 1.21
CACNA1A-201ENST00000360228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.2
CACNA1A-201ENST00000360228 CALRP27797 417 aaKnown RBP22.53■■□□□ 1.2
CACNA1A-201ENST00000360228 TNNT3P45378 269 aaPredicted RBP22.53■■□□□ 1.2
CACNA1A-201ENST00000360228 FTSJ3Q8IY81 847 aaKnown RBP22.53■■□□□ 1.2
CACNA1A-201ENST00000360228 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
CACNA1A-201ENST00000360228 KDM2AQ9Y2K7 1162 aa22.51■■□□□ 1.19
CACNA1A-201ENST00000360228 NPHP1O15259 732 aa22.51■■□□□ 1.19
CACNA1A-201ENST00000360228 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-201ENST00000360228 FGD1P98174 961 aa22.49■■□□□ 1.19
CACNA1A-201ENST00000360228 DRC7Q8IY82 874 aa22.48■■□□□ 1.19
CACNA1A-201ENST00000360228 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
CACNA1A-201ENST00000360228 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
CACNA1A-201ENST00000360228 NOC3LQ8WTT2 800 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-201ENST00000360228 ARID4BQ4LE39 1312 aaPredicted RBP22.47■■□□□ 1.19
CACNA1A-201ENST00000360228 HSP90AB1P08238 724 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-201ENST00000360228 L1TD1Q5T7N2 865 aaKnown RBP22.45■■□□□ 1.18
CACNA1A-201ENST00000360228 PRM3Q9NNZ6 103 aa22.44■■□□□ 1.18
CACNA1A-201ENST00000360228 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-201ENST00000360228 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-201ENST00000360228 KIAA2012Q0VF49 1180 aa22.39■■□□□ 1.17
CACNA1A-201ENST00000360228 KCNJ4P48050 445 aa22.39■■□□□ 1.17
CACNA1A-201ENST00000360228 GOLGA6L4A6NEF3 574 aa22.38■■□□□ 1.17
CACNA1A-201ENST00000360228 GOLGA2Q08379 1002 aa22.38■■□□□ 1.17
CACNA1A-201ENST00000360228 ARID3AQ99856 593 aa22.37■■□□□ 1.17
CACNA1A-201ENST00000360228 PNNQ9H307 717 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-201ENST00000360228 OS9Q13438 667 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-201ENST00000360228 CHIC2Q9UKJ5 165 aa22.3■■□□□ 1.16
CACNA1A-201ENST00000360228 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
CACNA1A-201ENST00000360228 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
CACNA1A-201ENST00000360228 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
CACNA1A-201ENST00000360228 NOP58Q9Y2X3 529 aaKnown RBP22.27■■□□□ 1.16
CACNA1A-201ENST00000360228 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNA1A-201ENST00000360228 A0A0U1RQG5 324 aaPredicted RBP22.26■■□□□ 1.15
CACNA1A-201ENST00000360228 RGS3P49796 1198 aa22.25■■□□□ 1.15
CACNA1A-201ENST00000360228 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
CACNA1A-201ENST00000360228 GNL2Q13823 731 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-201ENST00000360228 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-201ENST00000360228 PTMSP20962 102 aa22.24■■□□□ 1.15
CACNA1A-201ENST00000360228 CFAP53Q96M91 514 aa22.22■■□□□ 1.15
CACNA1A-201ENST00000360228 HSCBQ8IWL3 235 aa22.21■■□□□ 1.15
CACNA1A-201ENST00000360228 SETQ01105 290 aaPredicted RBP22.19■■□□□ 1.14
CACNA1A-201ENST00000360228 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
CACNA1A-201ENST00000360228 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
CACNA1A-201ENST00000360228 GOLGA6L1Q8N7Z2 621 aa22.18■■□□□ 1.14
CACNA1A-201ENST00000360228 MIER1Q8N108 512 aa22.17■■□□□ 1.14
CACNA1A-201ENST00000360228 PDE4CQ08493 712 aa22.17■■□□□ 1.14
CACNA1A-201ENST00000360228 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
CACNA1A-201ENST00000360228 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
CACNA1A-201ENST00000360228 NEUROD2Q15784 382 aa22.14■■□□□ 1.14
CACNA1A-201ENST00000360228 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-201ENST00000360228 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
CACNA1A-201ENST00000360228 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
CACNA1A-201ENST00000360228 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
CACNA1A-201ENST00000360228 MAPK8IP3Q9UPT6 1336 aa22.12■■□□□ 1.13
CACNA1A-201ENST00000360228 MCCP23508 829 aa22.11■■□□□ 1.13
CACNA1A-201ENST00000360228 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.1■■□□□ 1.13
CACNA1A-201ENST00000360228 CHMP4BQ9H444 224 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-201ENST00000360228 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
CACNA1A-201ENST00000360228 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
CACNA1A-201ENST00000360228 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
CACNA1A-201ENST00000360228 DEKP35659 375 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-201ENST00000360228 GZF1Q9H116 711 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-201ENST00000360228 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
CACNA1A-201ENST00000360228 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
CACNA1A-201ENST00000360228 TPM4P67936 248 aa21.95■■□□□ 1.1
CACNA1A-201ENST00000360228 FBXO3Q9UK99 471 aa21.95■■□□□ 1.1
CACNA1A-201ENST00000360228 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
CACNA1A-201ENST00000360228 MS4A1P11836 297 aa21.94■■□□□ 1.1
CACNA1A-201ENST00000360228 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
CACNA1A-201ENST00000360228 KIAA1211Q6ZU35 1233 aa21.93■■□□□ 1.1
CACNA1A-201ENST00000360228 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
CACNA1A-201ENST00000360228 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
CACNA1A-201ENST00000360228 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
CACNA1A-201ENST00000360228 CREBRFQ8IUR6 639 aa21.92■■□□□ 1.1
CACNA1A-201ENST00000360228 ABCC9O60706 1549 aa21.91■■□□□ 1.1
CACNA1A-201ENST00000360228 PATL2C9JE40 543 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-201ENST00000360228 GBP4Q96PP9 640 aa21.89■■□□□ 1.1
CACNA1A-201ENST00000360228 SYAP1Q96A49 352 aaPredicted RBP21.89■■□□□ 1.09
CACNA1A-201ENST00000360228 U2SURPO15042 1029 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-201ENST00000360228 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
CACNA1A-201ENST00000360228 HSP90B1P14625 803 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-201ENST00000360228 CEP89Q96ST8 783 aa21.87■■□□□ 1.09
CACNA1A-201ENST00000360228 HSP90AA2PQ14568 343 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-201ENST00000360228 RRP7BPQ9NSQ0 103 aa21.86■■□□□ 1.09
CACNA1A-201ENST00000360228 HTATSF1O43719 755 aaKnown RBP21.84■■□□□ 1.09
CACNA1A-201ENST00000360228 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-201ENST00000360228 CFAP44Q96MT7 982 aa21.83■■□□□ 1.09
CACNA1A-201ENST00000360228 APBB1O00213 710 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms