RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
COL13A1-202ENST00000357811 FHOD3Q2V2M9 1422 aa29.6■■■□□ 2.33
COL13A1-202ENST00000357811 CC2D2AQ9P2K1 1620 aa29.58■■■□□ 2.33
COL13A1-202ENST00000357811 TIAM1Q13009 1591 aa29.58■■■□□ 2.33
COL13A1-202ENST00000357811 NESP48681 1621 aa29.58■■■□□ 2.33
COL13A1-202ENST00000357811 KCNH8Q96L42 1107 aa29.56■■■□□ 2.32
COL13A1-202ENST00000357811 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
COL13A1-202ENST00000357811 HIRIP3Q9BW71 556 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-202ENST00000357811 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
COL13A1-202ENST00000357811 SETD5Q9C0A6 1442 aa29.49■■■□□ 2.31
COL13A1-202ENST00000357811 MAPKBP1O60336 1514 aa29.45■■■□□ 2.31
COL13A1-202ENST00000357811 PCF11O94913 1555 aaKnown RBP29.44■■■□□ 2.3
COL13A1-202ENST00000357811 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
COL13A1-202ENST00000357811 DDX10Q13206 875 aaKnown RBP29.43■■■□□ 2.3
COL13A1-202ENST00000357811 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
COL13A1-202ENST00000357811 DNAJC5BQ9UF47 199 aa29.41■■■□□ 2.3
COL13A1-202ENST00000357811 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
COL13A1-202ENST00000357811 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
COL13A1-202ENST00000357811 MAP3K1Q13233 1512 aa29.31■■■□□ 2.28
COL13A1-202ENST00000357811 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
COL13A1-202ENST00000357811 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
COL13A1-202ENST00000357811 ABCA10Q8WWZ4 1543 aa29.28■■■□□ 2.28
COL13A1-202ENST00000357811 SUPT16HQ9Y5B9 1047 aaKnown RBP29.28■■■□□ 2.28
COL13A1-202ENST00000357811 ARID3CA6NKF2 412 aa29.27■■■□□ 2.28
COL13A1-202ENST00000357811 MTUS2Q5JR59 1369 aa29.24■■■□□ 2.27
COL13A1-202ENST00000357811 CASKIN1Q8WXD9 1431 aa29.2■■■□□ 2.26
COL13A1-202ENST00000357811 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
COL13A1-202ENST00000357811 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
COL13A1-202ENST00000357811 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
COL13A1-202ENST00000357811 BCANQ96GW7 911 aa29.14■■■□□ 2.26
COL13A1-202ENST00000357811 CHIC2Q9UKJ5 165 aa29.14■■■□□ 2.26
COL13A1-202ENST00000357811 PPP1R15AO75807 674 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-202ENST00000357811 FGD6Q6ZV73 1430 aa29.12■■■□□ 2.25
COL13A1-202ENST00000357811 PTPRKQ15262 1439 aa29.1■■■□□ 2.25
COL13A1-202ENST00000357811 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
COL13A1-202ENST00000357811 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
COL13A1-202ENST00000357811 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
COL13A1-202ENST00000357811 TONSLQ96HA7 1378 aa29.05■■■□□ 2.24
COL13A1-202ENST00000357811 TRIM52Q96A61 297 aa29.05■■■□□ 2.24
COL13A1-202ENST00000357811 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
COL13A1-202ENST00000357811 SNAPC4Q5SXM2 1469 aa29.02■■■□□ 2.24
COL13A1-202ENST00000357811 CUL7Q14999 1698 aa29.01■■■□□ 2.24
COL13A1-202ENST00000357811 CTTNBP2Q8WZ74 1663 aa29.01■■■□□ 2.24
COL13A1-202ENST00000357811 CCDC18Q5T9S5 1454 aa29■■■□□ 2.23
COL13A1-202ENST00000357811 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.23
COL13A1-202ENST00000357811 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
COL13A1-202ENST00000357811 ANP32CO43423 234 aa28.94■■■□□ 2.22
COL13A1-202ENST00000357811 FKBP8Q14318 412 aa28.92■■■□□ 2.22
COL13A1-202ENST00000357811 TIMELESSQ9UNS1 1208 aa28.92■■■□□ 2.22
COL13A1-202ENST00000357811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.22
COL13A1-202ENST00000357811 MYOM3Q5VTT5 1437 aa28.89■■■□□ 2.21
COL13A1-202ENST00000357811 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.21
COL13A1-202ENST00000357811 FOXD1Q16676 465 aa28.88■■■□□ 2.21
COL13A1-202ENST00000357811 NAIPQ13075 1403 aa28.87■■■□□ 2.21
COL13A1-202ENST00000357811 LRRIQ1Q96JM4 1722 aa28.87■■■□□ 2.21
COL13A1-202ENST00000357811 HFM1A2PYH4 1435 aa28.87■■■□□ 2.21
COL13A1-202ENST00000357811 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
COL13A1-202ENST00000357811 GRIN2BQ13224 1484 aa28.84■■■□□ 2.21
COL13A1-202ENST00000357811 UACAQ9BZF9 1416 aa28.84■■■□□ 2.21
COL13A1-202ENST00000357811 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
COL13A1-202ENST00000357811 PTPN23Q9H3S7 1636 aa28.81■■■□□ 2.2
COL13A1-202ENST00000357811 MAGI3Q5TCQ9 1506 aa28.8■■■□□ 2.2
COL13A1-202ENST00000357811 SAMD9Q5K651 1589 aa28.79■■■□□ 2.2
COL13A1-202ENST00000357811 TSHZ2Q9NRE2 1034 aa28.78■■■□□ 2.2
COL13A1-202ENST00000357811 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.2
COL13A1-202ENST00000357811 CDK13Q14004 1512 aaKnown RBP28.72■■■□□ 2.19
COL13A1-202ENST00000357811 SUPT6HQ7KZ85 1726 aaKnown RBP28.71■■■□□ 2.19
COL13A1-202ENST00000357811 HSPA5P11021 654 aaKnown RBP28.68■■■□□ 2.18
COL13A1-202ENST00000357811 EHBP1L1Q8N3D4 1523 aa28.68■■■□□ 2.18
COL13A1-202ENST00000357811 CCER2I3L3R5 266 aa28.67■■■□□ 2.18
COL13A1-202ENST00000357811 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-202ENST00000357811 NEFLP07196 543 aa28.65■■■□□ 2.18
COL13A1-202ENST00000357811 UGGT2Q9NYU1 1516 aa28.65■■■□□ 2.18
COL13A1-202ENST00000357811 MPHOSPH9Q99550 1183 aa28.65■■■□□ 2.18
COL13A1-202ENST00000357811 CNGB1Q14028 1251 aaPredicted RBP28.62■■■□□ 2.17
COL13A1-202ENST00000357811 TARBP1Q13395 1621 aaKnown RBP28.62■■■□□ 2.17
COL13A1-202ENST00000357811 HNRNPUQ00839 825 aaKnown RBP eCLIP28.61■■■□□ 2.17
COL13A1-202ENST00000357811 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
COL13A1-202ENST00000357811 EPRSP07814 1512 aaKnown RBP28.61■■■□□ 2.17
COL13A1-202ENST00000357811 KDM6BO15054 1643 aa28.61■■■□□ 2.17
COL13A1-202ENST00000357811 WASHC2AQ641Q2 1341 aa28.6■■■□□ 2.17
COL13A1-202ENST00000357811 IRX6P78412 446 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-202ENST00000357811 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
COL13A1-202ENST00000357811 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-202ENST00000357811 IQGAP2Q13576 1575 aa28.55■■■□□ 2.16
COL13A1-202ENST00000357811 FBLN2P98095 1184 aa28.54■■■□□ 2.16
COL13A1-202ENST00000357811 THOC2Q8NI27 1593 aaKnown RBP28.54■■■□□ 2.16
COL13A1-202ENST00000357811 KDM5BQ9UGL1 1544 aa28.53■■■□□ 2.16
COL13A1-202ENST00000357811 EIF4G2P78344 907 aaKnown RBP eCLIP28.53■■■□□ 2.16
COL13A1-202ENST00000357811 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-202ENST00000357811 C11orf95C9JLR9 678 aaPredicted RBP28.51■■■□□ 2.15
COL13A1-202ENST00000357811 CCDC184Q52MB2 194 aa28.51■■■□□ 2.15
COL13A1-202ENST00000357811 ARHGEF11O15085 1522 aa28.51■■■□□ 2.15
COL13A1-202ENST00000357811 HECW1Q76N89 1606 aa28.5■■■□□ 2.15
COL13A1-202ENST00000357811 SLC4A1APQ9BWU0 796 aaKnown RBP28.48■■■□□ 2.15
COL13A1-202ENST00000357811 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
COL13A1-202ENST00000357811 NBPF8Q3BBV2 869 aa28.45■■■□□ 2.14
COL13A1-202ENST00000357811 ZNF326Q5BKZ1 582 aaKnown RBP28.45■■■□□ 2.14
COL13A1-202ENST00000357811 TCOF1Q13428 1488 aaKnown RBP28.44■■■□□ 2.14
COL13A1-202ENST00000357811 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms