RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.68
ATN1-201ENST00000356654 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.68
ATN1-201ENST00000356654 DAXXQ9UER7 740 aaPredicted RBP19.32■□□□□ 0.68
ATN1-201ENST00000356654 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
ATN1-201ENST00000356654 VPS8Q8N3P4 1428 aa19.3■□□□□ 0.68
ATN1-201ENST00000356654 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
ATN1-201ENST00000356654 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATN1-201ENST00000356654 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
ATN1-201ENST00000356654 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
ATN1-201ENST00000356654 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
ATN1-201ENST00000356654 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
ATN1-201ENST00000356654 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
ATN1-201ENST00000356654 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
ATN1-201ENST00000356654 STAG3Q9UJ98 1225 aa19.23■□□□□ 0.67
ATN1-201ENST00000356654 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
ATN1-201ENST00000356654 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
ATN1-201ENST00000356654 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
ATN1-201ENST00000356654 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATN1-201ENST00000356654 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
ATN1-201ENST00000356654 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
ATN1-201ENST00000356654 FKBP8Q14318 412 aa19.18■□□□□ 0.66
ATN1-201ENST00000356654 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
ATN1-201ENST00000356654 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
ATN1-201ENST00000356654 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
ATN1-201ENST00000356654 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
ATN1-201ENST00000356654 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
ATN1-201ENST00000356654 FHOD3Q2V2M9 1422 aa19.05■□□□□ 0.64
ATN1-201ENST00000356654 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
ATN1-201ENST00000356654 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
ATN1-201ENST00000356654 NEFMP07197 916 aa19.03■□□□□ 0.64
ATN1-201ENST00000356654 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
ATN1-201ENST00000356654 FOXD1Q16676 465 aa19.01■□□□□ 0.63
ATN1-201ENST00000356654 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
ATN1-201ENST00000356654 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
ATN1-201ENST00000356654 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
ATN1-201ENST00000356654 FMN1Q68DA7 1419 aa18.97■□□□□ 0.63
ATN1-201ENST00000356654 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
ATN1-201ENST00000356654 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
ATN1-201ENST00000356654 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
ATN1-201ENST00000356654 IGF1RP08069 1367 aa18.95■□□□□ 0.62
ATN1-201ENST00000356654 MYT1Q01538 1121 aa18.93■□□□□ 0.62
ATN1-201ENST00000356654 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
ATN1-201ENST00000356654 CARMIL2Q6F5E8 1435 aa18.9■□□□□ 0.62
ATN1-201ENST00000356654 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
ATN1-201ENST00000356654 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.61
ATN1-201ENST00000356654 DCAF11Q8TEB1 546 aa18.89■□□□□ 0.61
ATN1-201ENST00000356654 RTL5Q5HYW3 569 aaPredicted RBP18.88■□□□□ 0.61
ATN1-201ENST00000356654 PKD2Q13563 968 aa18.88■□□□□ 0.61
ATN1-201ENST00000356654 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
ATN1-201ENST00000356654 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
ATN1-201ENST00000356654 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
ATN1-201ENST00000356654 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
ATN1-201ENST00000356654 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
ATN1-201ENST00000356654 NPM2Q86SE8 214 aaKnown RBP18.81■□□□□ 0.6
ATN1-201ENST00000356654 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
ATN1-201ENST00000356654 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATN1-201ENST00000356654 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
ATN1-201ENST00000356654 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
ATN1-201ENST00000356654 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
ATN1-201ENST00000356654 GGT6Q6P531 493 aa18.75■□□□□ 0.59
ATN1-201ENST00000356654 NUP155O75694 1391 aa18.75■□□□□ 0.59
ATN1-201ENST00000356654 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
ATN1-201ENST00000356654 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
ATN1-201ENST00000356654 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
ATN1-201ENST00000356654 CFTRP13569 1480 aa18.72■□□□□ 0.59
ATN1-201ENST00000356654 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
ATN1-201ENST00000356654 NESP48681 1621 aa18.72■□□□□ 0.59
ATN1-201ENST00000356654 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
ATN1-201ENST00000356654 MLECQ14165 292 aa18.71■□□□□ 0.59
ATN1-201ENST00000356654 DHX57Q6P158 1386 aaKnown RBP18.71■□□□□ 0.59
ATN1-201ENST00000356654 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.589e-9■■■■■ 40.3
ATN1-201ENST00000356654 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
ATN1-201ENST00000356654 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
ATN1-201ENST00000356654 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
ATN1-201ENST00000356654 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
ATN1-201ENST00000356654 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
ATN1-201ENST00000356654 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
ATN1-201ENST00000356654 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
ATN1-201ENST00000356654 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
ATN1-201ENST00000356654 PPM1GO15355 546 aaPredicted RBP18.64■□□□□ 0.57
ATN1-201ENST00000356654 KIF21BO75037 1637 aa18.64■□□□□ 0.57
ATN1-201ENST00000356654 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
ATN1-201ENST00000356654 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
ATN1-201ENST00000356654 POGKQ9P215 609 aa18.63■□□□□ 0.57
ATN1-201ENST00000356654 KIF3BO15066 747 aa18.62■□□□□ 0.57
ATN1-201ENST00000356654 KANK1Q14678 1352 aa18.62■□□□□ 0.57
ATN1-201ENST00000356654 PTPRGP23470 1445 aa18.61■□□□□ 0.57
ATN1-201ENST00000356654 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
ATN1-201ENST00000356654 TMF1P82094 1093 aa18.61■□□□□ 0.57
ATN1-201ENST00000356654 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATN1-201ENST00000356654 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
ATN1-201ENST00000356654 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
ATN1-201ENST00000356654 PHLDB1Q86UU1 1377 aa18.58■□□□□ 0.57
ATN1-201ENST00000356654 ARAP1Q96P48 1450 aa18.58■□□□□ 0.57
ATN1-201ENST00000356654 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
ATN1-201ENST00000356654 ZBTB7CA1YPR0 619 aa18.56■□□□□ 0.56
ATN1-201ENST00000356654 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
ATN1-201ENST00000356654 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
ATN1-201ENST00000356654 CCER2I3L3R5 266 aa18.55■□□□□ 0.56
ATN1-201ENST00000356654 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms