RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
LINC01565-201ENST00000356020 PCF11O94913 1555 aaKnown RBP22.68■■□□□ 1.22
LINC01565-201ENST00000356020 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
LINC01565-201ENST00000356020 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
LINC01565-201ENST00000356020 ITGAEP38570 1179 aa22.65■■□□□ 1.22
LINC01565-201ENST00000356020 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
LINC01565-201ENST00000356020 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
LINC01565-201ENST00000356020 SETD5Q9C0A6 1442 aa22.62■■□□□ 1.21
LINC01565-201ENST00000356020 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
LINC01565-201ENST00000356020 CUL7Q14999 1698 aa22.6■■□□□ 1.21
LINC01565-201ENST00000356020 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
LINC01565-201ENST00000356020 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.21
LINC01565-201ENST00000356020 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.2
LINC01565-201ENST00000356020 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
LINC01565-201ENST00000356020 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
LINC01565-201ENST00000356020 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
LINC01565-201ENST00000356020 FHOD3Q2V2M9 1422 aa22.53■■□□□ 1.2
LINC01565-201ENST00000356020 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
LINC01565-201ENST00000356020 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
LINC01565-201ENST00000356020 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
LINC01565-201ENST00000356020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.48■■□□□ 1.19
LINC01565-201ENST00000356020 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
LINC01565-201ENST00000356020 NESP48681 1621 aa22.45■■□□□ 1.18
LINC01565-201ENST00000356020 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
LINC01565-201ENST00000356020 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
LINC01565-201ENST00000356020 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
LINC01565-201ENST00000356020 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
LINC01565-201ENST00000356020 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
LINC01565-201ENST00000356020 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
LINC01565-201ENST00000356020 SAMD9Q5K651 1589 aa22.38■■□□□ 1.17
LINC01565-201ENST00000356020 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
LINC01565-201ENST00000356020 FGD6Q6ZV73 1430 aa22.36■■□□□ 1.17
LINC01565-201ENST00000356020 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
LINC01565-201ENST00000356020 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
LINC01565-201ENST00000356020 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
LINC01565-201ENST00000356020 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
LINC01565-201ENST00000356020 MTUS2Q5JR59 1369 aa22.28■■□□□ 1.16
LINC01565-201ENST00000356020 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
LINC01565-201ENST00000356020 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
LINC01565-201ENST00000356020 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
LINC01565-201ENST00000356020 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
LINC01565-201ENST00000356020 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
LINC01565-201ENST00000356020 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
LINC01565-201ENST00000356020 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
LINC01565-201ENST00000356020 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
LINC01565-201ENST00000356020 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
LINC01565-201ENST00000356020 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
LINC01565-201ENST00000356020 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
LINC01565-201ENST00000356020 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
LINC01565-201ENST00000356020 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
LINC01565-201ENST00000356020 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
LINC01565-201ENST00000356020 DDX10Q13206 875 aaKnown RBP22.2■■□□□ 1.14
LINC01565-201ENST00000356020 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
LINC01565-201ENST00000356020 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
LINC01565-201ENST00000356020 UGGT2Q9NYU1 1516 aa22.16■■□□□ 1.14
LINC01565-201ENST00000356020 TONSLQ96HA7 1378 aa22.16■■□□□ 1.14
LINC01565-201ENST00000356020 NAIPQ13075 1403 aa22.15■■□□□ 1.14
LINC01565-201ENST00000356020 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
LINC01565-201ENST00000356020 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
LINC01565-201ENST00000356020 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
LINC01565-201ENST00000356020 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
LINC01565-201ENST00000356020 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
LINC01565-201ENST00000356020 GCC2Q8IWJ2 1684 aa22.08■■□□□ 1.13
LINC01565-201ENST00000356020 CCER2I3L3R5 266 aa22.08■■□□□ 1.12
LINC01565-201ENST00000356020 TSHZ2Q9NRE2 1034 aa22.07■■□□□ 1.12
LINC01565-201ENST00000356020 TCOF1Q13428 1488 aaKnown RBP22.07■■□□□ 1.12
LINC01565-201ENST00000356020 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
LINC01565-201ENST00000356020 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
LINC01565-201ENST00000356020 IQGAP2Q13576 1575 aa22.04■■□□□ 1.12
LINC01565-201ENST00000356020 ANP32CO43423 234 aa22.03■■□□□ 1.12
LINC01565-201ENST00000356020 AKNAQ7Z591 1439 aa22.02■■□□□ 1.12
LINC01565-201ENST00000356020 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
LINC01565-201ENST00000356020 ANP32EQ9BTT0 268 aa22.02■■□□□ 1.11
LINC01565-201ENST00000356020 EPRSP07814 1512 aaKnown RBP21.99■■□□□ 1.11
LINC01565-201ENST00000356020 WDR62O43379 1518 aa21.96■■□□□ 1.11
LINC01565-201ENST00000356020 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
LINC01565-201ENST00000356020 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
LINC01565-201ENST00000356020 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
LINC01565-201ENST00000356020 KDM6BO15054 1643 aa21.91■■□□□ 1.1
LINC01565-201ENST00000356020 RRP7BPQ9NSQ0 103 aa21.9■■□□□ 1.1
LINC01565-201ENST00000356020 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
LINC01565-201ENST00000356020 FKBP8Q14318 412 aa21.88■■□□□ 1.09
LINC01565-201ENST00000356020 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
LINC01565-201ENST00000356020 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
LINC01565-201ENST00000356020 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
LINC01565-201ENST00000356020 NEFLP07196 543 aa21.83■■□□□ 1.09
LINC01565-201ENST00000356020 BCANQ96GW7 911 aa21.83■■□□□ 1.08
LINC01565-201ENST00000356020 KIAA0556O60303 1618 aa21.81■■□□□ 1.08
LINC01565-201ENST00000356020 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
LINC01565-201ENST00000356020 ROCK1Q13464 1354 aa21.78■■□□□ 1.08
LINC01565-201ENST00000356020 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
LINC01565-201ENST00000356020 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
LINC01565-201ENST00000356020 DAPK1P53355 1430 aa21.78■■□□□ 1.08
LINC01565-201ENST00000356020 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
LINC01565-201ENST00000356020 WASHC2AQ641Q2 1341 aa21.76■■□□□ 1.07
LINC01565-201ENST00000356020 KIAA0586Q9BVV6 1533 aa21.76■■□□□ 1.07
LINC01565-201ENST00000356020 DISP1Q96F81 1524 aa21.75■■□□□ 1.07
LINC01565-201ENST00000356020 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
LINC01565-201ENST00000356020 EIF4G2P78344 907 aaKnown RBP eCLIP21.74■■□□□ 1.07
LINC01565-201ENST00000356020 NUP153P49790 1475 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms