RNA–Protein interactions for RNA: ENST00000354991.9

DDX4-202, Transcript of DEAD-box helicase 4, humanhuman

TSL 5 BASIC

Gene DDX4, Length 2,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-202ENST00000354991 PROM2Q8N271 834 aa9.23□□□□□ -0.93
DDX4-202ENST00000354991 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
DDX4-202ENST00000354991 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
DDX4-202ENST00000354991 CACNB1Q02641 598 aaPredicted RBP9.21□□□□□ -0.93
DDX4-202ENST00000354991 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
DDX4-202ENST00000354991 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
DDX4-202ENST00000354991 RAPGEF2Q9Y4G8 1499 aa9.19□□□□□ -0.94
DDX4-202ENST00000354991 TNIKQ9UKE5 1360 aa9.18□□□□□ -0.94
DDX4-202ENST00000354991 CC2D2AQ9P2K1 1620 aa9.15□□□□□ -0.94
DDX4-202ENST00000354991 CUX1P39880 1505 aa9.15□□□□□ -0.94
DDX4-202ENST00000354991 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
DDX4-202ENST00000354991 GOLGA3Q08378 1498 aa9.14□□□□□ -0.95
DDX4-202ENST00000354991 HMGXB3Q12766 1538 aa9.14□□□□□ -0.95
DDX4-202ENST00000354991 NESP48681 1621 aa9.12□□□□□ -0.95
DDX4-202ENST00000354991 CFTRP13569 1480 aa9.12□□□□□ -0.95
DDX4-202ENST00000354991 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
DDX4-202ENST00000354991 EEA1Q15075 1411 aa9.11□□□□□ -0.95
DDX4-202ENST00000354991 CLIP1P30622 1438 aa9.1□□□□□ -0.95
DDX4-202ENST00000354991 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.95
DDX4-202ENST00000354991 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
DDX4-202ENST00000354991 CADPSQ9ULU8 1353 aa9.08□□□□□ -0.96
DDX4-202ENST00000354991 SSUH2Q9Y2M2 353 aa9.05□□□□□ -0.96
DDX4-202ENST00000354991 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
DDX4-202ENST00000354991 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
DDX4-202ENST00000354991 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
DDX4-202ENST00000354991 KANK4Q5T7N3 995 aaPredicted RBP9.04□□□□□ -0.96
DDX4-202ENST00000354991 KIF21BO75037 1637 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 SPDYE2BA6NHP3 402 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 SPDYE6P0CI01 402 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 PKD2Q13563 968 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 CUX2O14529 1486 aa9.04□□□□□ -0.96
DDX4-202ENST00000354991 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
DDX4-202ENST00000354991 PRXQ9BXM0 1461 aa9.02□□□□□ -0.97
DDX4-202ENST00000354991 FGD5Q6ZNL6 1462 aa9.02□□□□□ -0.97
DDX4-202ENST00000354991 KIF27Q86VH2 1401 aa9.01□□□□□ -0.97
DDX4-202ENST00000354991 IGF1RP08069 1367 aa9.01□□□□□ -0.97
DDX4-202ENST00000354991 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
DDX4-202ENST00000354991 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
DDX4-202ENST00000354991 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
DDX4-202ENST00000354991 VPS8Q8N3P4 1428 aa8.99□□□□□ -0.97
DDX4-202ENST00000354991 ARAP1Q96P48 1450 aa8.99□□□□□ -0.97
DDX4-202ENST00000354991 MIER1Q8N108 512 aa8.98□□□□□ -0.97
DDX4-202ENST00000354991 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
DDX4-202ENST00000354991 ZEB1P37275 1124 aaPredicted RBP8.97□□□□□ -0.97
DDX4-202ENST00000354991 ITGAEP38570 1179 aa8.97□□□□□ -0.97
DDX4-202ENST00000354991 TDRD9Q8NDG6 1382 aaKnown RBP8.95□□□□□ -0.98
DDX4-202ENST00000354991 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
DDX4-202ENST00000354991 ARHGAP35Q9NRY4 1499 aa8.93□□□□□ -0.98
DDX4-202ENST00000354991 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
DDX4-202ENST00000354991 TOPBP1Q92547 1522 aa8.92□□□□□ -0.98
DDX4-202ENST00000354991 URB2Q14146 1524 aaKnown RBP8.91□□□□□ -0.98
DDX4-202ENST00000354991 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
DDX4-202ENST00000354991 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
DDX4-202ENST00000354991 CLEC11AQ9Y240 323 aa8.9□□□□□ -0.98
DDX4-202ENST00000354991 SPOCK2Q92563 424 aa8.89□□□□□ -0.99
DDX4-202ENST00000354991 RGL2O15211 777 aa8.87□□□□□ -0.99
DDX4-202ENST00000354991 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
DDX4-202ENST00000354991 ARID3CA6NKF2 412 aa8.87□□□□□ -0.99
DDX4-202ENST00000354991 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
DDX4-202ENST00000354991 FHOD3Q2V2M9 1422 aa8.86□□□□□ -0.99
DDX4-202ENST00000354991 DNMBPQ6XZF7 1577 aa8.86□□□□□ -0.99
DDX4-202ENST00000354991 PRKCSHP14314 528 aaPredicted RBP8.85□□□□□ -0.99
DDX4-202ENST00000354991 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
DDX4-202ENST00000354991 KIF21AQ7Z4S6 1674 aa8.85□□□□□ -0.99
DDX4-202ENST00000354991 NPM1P06748 294 aaKnown RBP eCLIP8.84□□□□□ -0.99
DDX4-202ENST00000354991 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -1
DDX4-202ENST00000354991 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
DDX4-202ENST00000354991 PLCB2Q00722 1185 aa8.82□□□□□ -1
DDX4-202ENST00000354991 PDS5BQ9NTI5 1447 aa8.81□□□□□ -1
DDX4-202ENST00000354991 FAM50AQ14320 339 aaKnown RBP8.81□□□□□ -1
DDX4-202ENST00000354991 LAMC3Q9Y6N6 1575 aa8.8□□□□□ -1
DDX4-202ENST00000354991 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
DDX4-202ENST00000354991 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
DDX4-202ENST00000354991 DIEXFQ68CQ4 756 aaKnown RBP8.79□□□□□ -1
DDX4-202ENST00000354991 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
DDX4-202ENST00000354991 ZNF608Q9ULD9 1512 aaPredicted RBP8.77□□□□□ -1.01
DDX4-202ENST00000354991 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1.01
DDX4-202ENST00000354991 REM2Q8IYK8 340 aaPredicted RBP8.76□□□□□ -1.01
DDX4-202ENST00000354991 DHX57Q6P158 1386 aaKnown RBP8.76□□□□□ -1.01
DDX4-202ENST00000354991 PCF11O94913 1555 aaKnown RBP8.75□□□□□ -1.01
DDX4-202ENST00000354991 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
DDX4-202ENST00000354991 LRRC9Q6ZRR7 1453 aa8.74□□□□□ -1.01
DDX4-202ENST00000354991 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
DDX4-202ENST00000354991 RRBP1Q9P2E9 1410 aaKnown RBP8.73□□□□□ -1.01
DDX4-202ENST00000354991 ZNF316A6NFI3 1004 aaPredicted RBP8.73□□□□□ -1.01
DDX4-202ENST00000354991 CFAP44Q96MT7 982 aa8.73□□□□□ -1.01
DDX4-202ENST00000354991 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
DDX4-202ENST00000354991 TARBP1Q13395 1621 aaKnown RBP8.73□□□□□ -1.01
DDX4-202ENST00000354991 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
DDX4-202ENST00000354991 SIN3AQ96ST3 1273 aa8.72□□□□□ -1.01
DDX4-202ENST00000354991 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
DDX4-202ENST00000354991 PITPNM1O00562 1244 aa8.72□□□□□ -1.01
DDX4-202ENST00000354991 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
DDX4-202ENST00000354991 CHADLQ6NUI6 762 aa8.71□□□□□ -1.01
DDX4-202ENST00000354991 YTHDC1Q96MU7 727 aaKnown RBP8.71□□□□□ -1.01
DDX4-202ENST00000354991 RAB3GAP2Q9H2M9 1393 aa8.71□□□□□ -1.02
DDX4-202ENST00000354991 CHGAP10645 457 aaKnown RBP8.71□□□□□ -1.02
DDX4-202ENST00000354991 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
DDX4-202ENST00000354991 SPDYE1Q8NFV5 336 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms