RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 PLEKHG5O94827 1062 aa3.87□□□□□ -1.79
SMARCAD1-201ENST00000354268 OXER1Q8TDS5 423 aa3.87□□□□□ -1.79
SMARCAD1-201ENST00000354268 ZC3H15Q8WU90 426 aaKnown RBP3.87□□□□□ -1.79
SMARCAD1-201ENST00000354268 KCNV2Q8TDN2 545 aa3.84□□□□□ -1.79
SMARCAD1-201ENST00000354268 TRIM41Q8WV44 630 aa3.84□□□□□ -1.8
SMARCAD1-201ENST00000354268 NPM2Q86SE8 214 aaKnown RBP3.83□□□□□ -1.8
SMARCAD1-201ENST00000354268 TESPA1A2RU30 521 aaPredicted RBP3.83□□□□□ -1.8
SMARCAD1-201ENST00000354268 ZNF692Q9BU19 519 aaPredicted RBP3.82□□□□□ -1.8
SMARCAD1-201ENST00000354268 TRAIPQ9BWF2 469 aa3.82□□□□□ -1.8
SMARCAD1-201ENST00000354268 TMUB1Q9BVT8 246 aa3.81□□□□□ -1.8
SMARCAD1-201ENST00000354268 GPR37L1O60883 481 aa3.81□□□□□ -1.8
SMARCAD1-201ENST00000354268 PAXIP1Q6ZW49 1069 aaPredicted RBP3.81□□□□□ -1.8
SMARCAD1-201ENST00000354268 ERICH6Q7L0X2 663 aa3.8□□□□□ -1.8
SMARCAD1-201ENST00000354268 IRF5Q13568 498 aa3.8□□□□□ -1.8
SMARCAD1-201ENST00000354268 ZNF428Q96B54 188 aa3.8□□□□□ -1.8
SMARCAD1-201ENST00000354268 UNCXA6NJT0 531 aa3.79□□□□□ -1.8
SMARCAD1-201ENST00000354268 BARGINQ6ZT62 677 aa3.79□□□□□ -1.8
SMARCAD1-201ENST00000354268 ZMYND15Q9H091 742 aa3.79□□□□□ -1.8
SMARCAD1-201ENST00000354268 CACNB1Q02641 598 aaPredicted RBP3.78□□□□□ -1.8
SMARCAD1-201ENST00000354268 NUBP1P53384 320 aa3.78□□□□□ -1.8
SMARCAD1-201ENST00000354268 MKRN3Q13064 507 aaKnown RBP3.77□□□□□ -1.81
SMARCAD1-201ENST00000354268 ILDR1Q86SU0 546 aaPredicted RBP3.77□□□□□ -1.81
SMARCAD1-201ENST00000354268 SUPT5HO00267 1087 aaKnown RBP3.76□□□□□ -1.81
SMARCAD1-201ENST00000354268 SCAF1Q9H7N4 1312 aaKnown RBP3.76□□□□□ -1.81
SMARCAD1-201ENST00000354268 SPDYE4A6NLX3 237 aa3.76□□□□□ -1.81
SMARCAD1-201ENST00000354268 ZNF219Q9P2Y4 722 aaPredicted RBP3.75□□□□□ -1.81
SMARCAD1-201ENST00000354268 DSG3P32926 999 aa3.75□□□□□ -1.81
SMARCAD1-201ENST00000354268 CAMK2BQ13554 666 aa3.75□□□□□ -1.81
SMARCAD1-201ENST00000354268 C7P10643 843 aa3.74□□□□□ -1.81
SMARCAD1-201ENST00000354268 LDLRAD1Q5T700 205 aa3.74□□□□□ -1.81
SMARCAD1-201ENST00000354268 NCKAP5LQ9HCH0 1330 aa3.74□□□□□ -1.81
SMARCAD1-201ENST00000354268 SSUH2Q9Y2M2 353 aa3.74□□□□□ -1.81
SMARCAD1-201ENST00000354268 CHRM1P11229 460 aaPredicted RBP3.74□□□□□ -1.81
SMARCAD1-201ENST00000354268 TXNDC2Q86VQ3 553 aa3.73□□□□□ -1.81
SMARCAD1-201ENST00000354268 SPRYD3Q8NCJ5 442 aa3.73□□□□□ -1.81
SMARCAD1-201ENST00000354268 SLC39A13Q96H72 371 aa3.73□□□□□ -1.81
SMARCAD1-201ENST00000354268 POTEHQ6S545 545 aa3.72□□□□□ -1.81
SMARCAD1-201ENST00000354268 C14orf37Q86TY3 774 aa3.72□□□□□ -1.81
SMARCAD1-201ENST00000354268 SLC24A3Q9HC58 644 aa3.72□□□□□ -1.81
SMARCAD1-201ENST00000354268 POLA2Q14181 598 aa3.71□□□□□ -1.81
SMARCAD1-201ENST00000354268 MFSD10Q14728 455 aa3.71□□□□□ -1.81
SMARCAD1-201ENST00000354268 A6NJR5 290 aa3.71□□□□□ -1.82
SMARCAD1-201ENST00000354268 FBXO22Q8NEZ5 403 aa3.71□□□□□ -1.82
SMARCAD1-201ENST00000354268 LMOD2Q6P5Q4 547 aa3.7□□□□□ -1.82
SMARCAD1-201ENST00000354268 PUS7Q96PZ0 661 aaKnown RBP3.69□□□□□ -1.82
SMARCAD1-201ENST00000354268 GOPCQ9HD26 462 aa3.69□□□□□ -1.82
SMARCAD1-201ENST00000354268 ZC3H4Q9UPT8 1303 aaKnown RBP3.68□□□□□ -1.82
SMARCAD1-201ENST00000354268 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
SMARCAD1-201ENST00000354268 HMGB2P26583 209 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-201ENST00000354268 KIAA1522Q9P206 1035 aaPredicted RBP3.66□□□□□ -1.82
SMARCAD1-201ENST00000354268 SPOCK2Q92563 424 aa3.66□□□□□ -1.82
SMARCAD1-201ENST00000354268 PRIM1P49642 420 aaKnown RBP3.65□□□□□ -1.83
SMARCAD1-201ENST00000354268 TRAK2O60296 914 aa3.65□□□□□ -1.83
SMARCAD1-201ENST00000354268 ECM1Q16610 540 aa3.65□□□□□ -1.83
SMARCAD1-201ENST00000354268 GPBP1L1Q9HC44 474 aaPredicted RBP3.65□□□□□ -1.83
SMARCAD1-201ENST00000354268 MAP3K9P80192 1104 aa3.64□□□□□ -1.83
SMARCAD1-201ENST00000354268 SIRT1Q96EB6 747 aa3.64□□□□□ -1.83
SMARCAD1-201ENST00000354268 SLAIN2Q9P270 581 aa3.64□□□□□ -1.83
SMARCAD1-201ENST00000354268 CHMP4AQ9BY43 222 aa3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 MFRPQ9BY79 579 aa3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 MTMR7Q9Y216 660 aa3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 REPIN1Q9BWE0 567 aaKnown RBP3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 PPP1R37O75864 691 aa3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 PLSCR2Q9NRY7 297 aa3.63□□□□□ -1.83
SMARCAD1-201ENST00000354268 TMEM88BA6NKF7 163 aa3.62□□□□□ -1.83
SMARCAD1-201ENST00000354268 ECM2O94769 699 aaPredicted RBP3.62□□□□□ -1.83
SMARCAD1-201ENST00000354268 CFAP44Q96MT7 982 aa3.62□□□□□ -1.83
SMARCAD1-201ENST00000354268 AMHR2Q16671 573 aa3.62□□□□□ -1.83
SMARCAD1-201ENST00000354268 NISCHQ9Y2I1 1504 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 TRIM66O15016 1216 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 SEMA3EO15041 775 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 PHLDB3Q6NSJ2 640 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 FAM117AQ9C073 453 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 SOCS7O14512 581 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 KDM4CQ9H3R0 1056 aa3.61□□□□□ -1.83
SMARCAD1-201ENST00000354268 ARHGEF1Q92888 912 aaKnown RBP3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 MS4A4AQ96JQ5 239 aa3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 SHROOM4Q9ULL8 1493 aa3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 ARID3CA6NKF2 412 aa3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 MCM6Q14566 821 aa3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 ADAMTS19Q8TE59 1207 aa3.6□□□□□ -1.83
SMARCAD1-201ENST00000354268 FARP1Q9Y4F1 1045 aaPredicted RBP3.59□□□□□ -1.83
SMARCAD1-201ENST00000354268 CCDC82Q8N4S0 544 aa3.59□□□□□ -1.83
SMARCAD1-201ENST00000354268 CRISPLD2Q9H0B8 497 aa3.59□□□□□ -1.84
SMARCAD1-201ENST00000354268 POM121Q96HA1 1249 aa3.59□□□□□ -1.84
SMARCAD1-201ENST00000354268 RSPH6AQ9H0K4 717 aa3.59□□□□□ -1.84
SMARCAD1-201ENST00000354268 CCDC125Q86Z20 511 aa3.58□□□□□ -1.84
SMARCAD1-201ENST00000354268 AMOTL2Q9Y2J4 779 aa3.58□□□□□ -1.84
SMARCAD1-201ENST00000354268 ESF1Q9H501 851 aaKnown RBP3.57□□□□□ -1.84
SMARCAD1-201ENST00000354268 PABPN1Q86U42 306 aaKnown RBP eCLIP3.57□□□□□ -1.84
SMARCAD1-201ENST00000354268 RBM47A0AV96 593 aaKnown RBP3.57□□□□□ -1.84
SMARCAD1-201ENST00000354268 SKAP1Q86WV1 359 aa3.57□□□□□ -1.84
SMARCAD1-201ENST00000354268 PHOX2BQ99453 314 aa3.56□□□□□ -1.84
SMARCAD1-201ENST00000354268 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMARCAD1-201ENST00000354268 TBC1D12O60347 775 aa3.55□□□□□ -1.84
SMARCAD1-201ENST00000354268 SPINK5Q9NQ38 1064 aaPredicted RBP3.55□□□□□ -1.84
SMARCAD1-201ENST00000354268 MS4A1P11836 297 aa3.55□□□□□ -1.84
SMARCAD1-201ENST00000354268 CLUAP1Q96AJ1 413 aa3.55□□□□□ -1.84
SMARCAD1-201ENST00000354268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.55□□□□□ -1.848e-7■■■■□ 20.5
SMARCAD1-201ENST00000354268 PCDH10Q9P2E7 1040 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms