RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 SALL2Q9Y467 1007 aaPredicted RBP25.09■■□□□ 1.61
CTSB-202ENST00000353047 BCL11AQ9H165 835 aa25.06■■□□□ 1.6
CTSB-202ENST00000353047 FOXD1Q16676 465 aa24.99■■□□□ 1.59
CTSB-202ENST00000353047 B4GALNT3Q6L9W6 998 aa24.99■■□□□ 1.59
CTSB-202ENST00000353047 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
CTSB-202ENST00000353047 KIF21BO75037 1637 aa24.97■■□□□ 1.59
CTSB-202ENST00000353047 MRS2Q9HD23 443 aa24.97■■□□□ 1.59
CTSB-202ENST00000353047 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
CTSB-202ENST00000353047 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
CTSB-202ENST00000353047 SETD5Q9C0A6 1442 aa24.88■■□□□ 1.57
CTSB-202ENST00000353047 MTUS2Q5JR59 1369 aa24.87■■□□□ 1.57
CTSB-202ENST00000353047 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
CTSB-202ENST00000353047 ARAP1Q96P48 1450 aa24.86■■□□□ 1.57
CTSB-202ENST00000353047 ZNF777Q9ULD5 760 aaPredicted RBP24.86■■□□□ 1.57
CTSB-202ENST00000353047 CUX2O14529 1486 aa24.84■■□□□ 1.57
CTSB-202ENST00000353047 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
CTSB-202ENST00000353047 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
CTSB-202ENST00000353047 HSPA5P11021 654 aaKnown RBP24.75■■□□□ 1.55
CTSB-202ENST00000353047 EIF4G2P78344 907 aaKnown RBP eCLIP24.74■■□□□ 1.55
CTSB-202ENST00000353047 RTL5Q5HYW3 569 aaPredicted RBP24.73■■□□□ 1.55
CTSB-202ENST00000353047 PHLDB1Q86UU1 1377 aa24.73■■□□□ 1.55
CTSB-202ENST00000353047 CCDC136Q96JN2 1154 aa24.7■■□□□ 1.55
CTSB-202ENST00000353047 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
CTSB-202ENST00000353047 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
CTSB-202ENST00000353047 KDM2AQ9Y2K7 1162 aa24.69■■□□□ 1.54
CTSB-202ENST00000353047 FBLN2P98095 1184 aa24.68■■□□□ 1.54
CTSB-202ENST00000353047 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
CTSB-202ENST00000353047 CCDC184Q52MB2 194 aa24.65■■□□□ 1.54
CTSB-202ENST00000353047 SLC4A1APQ9BWU0 796 aaKnown RBP24.6■■□□□ 1.53
CTSB-202ENST00000353047 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
CTSB-202ENST00000353047 MSH5O43196 834 aa24.57■■□□□ 1.52
CTSB-202ENST00000353047 ANP32AP39687 249 aaKnown RBP24.57■■□□□ 1.52
CTSB-202ENST00000353047 ARHGAP35Q9NRY4 1499 aa24.57■■□□□ 1.52
CTSB-202ENST00000353047 RTN4Q9NQC3 1192 aaKnown RBP24.57■■□□□ 1.52
CTSB-202ENST00000353047 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
CTSB-202ENST00000353047 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
CTSB-202ENST00000353047 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
CTSB-202ENST00000353047 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
CTSB-202ENST00000353047 IGF1RP08069 1367 aa24.52■■□□□ 1.52
CTSB-202ENST00000353047 DEKP35659 375 aaKnown RBP24.48■■□□□ 1.51
CTSB-202ENST00000353047 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
CTSB-202ENST00000353047 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
CTSB-202ENST00000353047 DAXXQ9UER7 740 aaPredicted RBP24.46■■□□□ 1.51
CTSB-202ENST00000353047 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
CTSB-202ENST00000353047 ZBTB47Q9UFB7 747 aaPredicted RBP24.45■■□□□ 1.5
CTSB-202ENST00000353047 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
CTSB-202ENST00000353047 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
CTSB-202ENST00000353047 MPHOSPH9Q99550 1183 aa24.39■■□□□ 1.5
CTSB-202ENST00000353047 TIMELESSQ9UNS1 1208 aa24.39■■□□□ 1.5
CTSB-202ENST00000353047 RGL3Q3MIN7 710 aa24.39■■□□□ 1.49
CTSB-202ENST00000353047 NOP58Q9Y2X3 529 aaKnown RBP24.37■■□□□ 1.49
CTSB-202ENST00000353047 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
CTSB-202ENST00000353047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.35■■□□□ 1.49
CTSB-202ENST00000353047 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
CTSB-202ENST00000353047 MYT1LQ9UL68 1186 aa24.33■■□□□ 1.48
CTSB-202ENST00000353047 CUX1P39880 1505 aa24.32■■□□□ 1.48
CTSB-202ENST00000353047 C11orf95C9JLR9 678 aaPredicted RBP24.32■■□□□ 1.48
CTSB-202ENST00000353047 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
CTSB-202ENST00000353047 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
CTSB-202ENST00000353047 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
CTSB-202ENST00000353047 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
CTSB-202ENST00000353047 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
CTSB-202ENST00000353047 CARD11Q9BXL7 1154 aa24.24■■□□□ 1.47
CTSB-202ENST00000353047 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
CTSB-202ENST00000353047 ARXQ96QS3 562 aa24.24■■□□□ 1.47
CTSB-202ENST00000353047 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
CTSB-202ENST00000353047 CC2D1BQ5T0F9 858 aaKnown RBP24.2■■□□□ 1.47
CTSB-202ENST00000353047 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.46
CTSB-202ENST00000353047 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
CTSB-202ENST00000353047 NBPF8Q3BBV2 869 aa24.18■■□□□ 1.46
CTSB-202ENST00000353047 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
CTSB-202ENST00000353047 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
CTSB-202ENST00000353047 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
CTSB-202ENST00000353047 EIF5BO60841 1220 aaKnown RBP24.16■■□□□ 1.46
CTSB-202ENST00000353047 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
CTSB-202ENST00000353047 PLIN1O60240 522 aa24.14■■□□□ 1.46
CTSB-202ENST00000353047 PKD2Q13563 968 aa24.14■■□□□ 1.46
CTSB-202ENST00000353047 NEFMP07197 916 aa24.14■■□□□ 1.45
CTSB-202ENST00000353047 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
CTSB-202ENST00000353047 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
CTSB-202ENST00000353047 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
CTSB-202ENST00000353047 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
CTSB-202ENST00000353047 SKAP1Q86WV1 359 aa24.12■■□□□ 1.45
CTSB-202ENST00000353047 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
CTSB-202ENST00000353047 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
CTSB-202ENST00000353047 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
CTSB-202ENST00000353047 SLC4A3P48751 1232 aa24.09■■□□□ 1.45
CTSB-202ENST00000353047 EXOC6Q8TAG9 804 aa24.07■■□□□ 1.44
CTSB-202ENST00000353047 NUDCQ9Y266 331 aa24.06■■□□□ 1.44
CTSB-202ENST00000353047 RGS3P49796 1198 aa24.05■■□□□ 1.44
CTSB-202ENST00000353047 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.05■■□□□ 1.44
CTSB-202ENST00000353047 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
CTSB-202ENST00000353047 ZBED9Q6R2W3 1325 aa24.03■■□□□ 1.44
CTSB-202ENST00000353047 CCDC7Q96M83 1385 aa24.03■■□□□ 1.44
CTSB-202ENST00000353047 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
CTSB-202ENST00000353047 CFTRP13569 1480 aa24.02■■□□□ 1.44
CTSB-202ENST00000353047 ST20-MTHFSA0A0A6YYL1 179 aa24.01■■□□□ 1.43
CTSB-202ENST00000353047 TSPY4P0CV99 314 aa24■■□□□ 1.43
CTSB-202ENST00000353047 TSPY10P0CW01 314 aa24■■□□□ 1.43
CTSB-202ENST00000353047 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.433e-7■■■■■ 33.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms