RNA–Protein interactions for RNA: ENST00000352940.8

DDX47-201, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best) BASIC

Gene DDX47, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-201ENST00000352940 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
DDX47-201ENST00000352940 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
DDX47-201ENST00000352940 ZBTB22O15209 634 aa12.96□□□□□ -0.34
DDX47-201ENST00000352940 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
DDX47-201ENST00000352940 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
DDX47-201ENST00000352940 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
DDX47-201ENST00000352940 WIZO95785 1651 aa12.87□□□□□ -0.35
DDX47-201ENST00000352940 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
DDX47-201ENST00000352940 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
DDX47-201ENST00000352940 CLCN6P51797 869 aa12.84□□□□□ -0.35
DDX47-201ENST00000352940 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
DDX47-201ENST00000352940 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
DDX47-201ENST00000352940 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
DDX47-201ENST00000352940 WDR62O43379 1518 aa12.75□□□□□ -0.37
DDX47-201ENST00000352940 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
DDX47-201ENST00000352940 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
DDX47-201ENST00000352940 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.37
DDX47-201ENST00000352940 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
DDX47-201ENST00000352940 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
DDX47-201ENST00000352940 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
DDX47-201ENST00000352940 CFTRP13569 1480 aa12.66□□□□□ -0.38
DDX47-201ENST00000352940 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
DDX47-201ENST00000352940 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
DDX47-201ENST00000352940 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
DDX47-201ENST00000352940 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
DDX47-201ENST00000352940 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
DDX47-201ENST00000352940 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
DDX47-201ENST00000352940 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
DDX47-201ENST00000352940 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
DDX47-201ENST00000352940 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
DDX47-201ENST00000352940 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
DDX47-201ENST00000352940 TOPBP1Q92547 1522 aa12.46□□□□□ -0.41
DDX47-201ENST00000352940 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
DDX47-201ENST00000352940 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
DDX47-201ENST00000352940 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
DDX47-201ENST00000352940 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
DDX47-201ENST00000352940 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
DDX47-201ENST00000352940 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
DDX47-201ENST00000352940 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
DDX47-201ENST00000352940 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
DDX47-201ENST00000352940 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
DDX47-201ENST00000352940 AQRO60306 1485 aaKnown RBP eCLIP12.37□□□□□ -0.434e-6■■■■□ 20.6
DDX47-201ENST00000352940 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
DDX47-201ENST00000352940 CHD1O14646 1710 aa12.36□□□□□ -0.43
DDX47-201ENST00000352940 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
DDX47-201ENST00000352940 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
DDX47-201ENST00000352940 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
DDX47-201ENST00000352940 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
DDX47-201ENST00000352940 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
DDX47-201ENST00000352940 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
DDX47-201ENST00000352940 POTEMA6NI47 508 aa12.29□□□□□ -0.44
DDX47-201ENST00000352940 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.44
DDX47-201ENST00000352940 SOGA1O94964 1423 aa12.27□□□□□ -0.44
DDX47-201ENST00000352940 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX47-201ENST00000352940 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
DDX47-201ENST00000352940 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
DDX47-201ENST00000352940 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
DDX47-201ENST00000352940 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
DDX47-201ENST00000352940 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
DDX47-201ENST00000352940 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
DDX47-201ENST00000352940 CUX1P39880 1505 aa12.22□□□□□ -0.45
DDX47-201ENST00000352940 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
DDX47-201ENST00000352940 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
DDX47-201ENST00000352940 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
DDX47-201ENST00000352940 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
DDX47-201ENST00000352940 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
DDX47-201ENST00000352940 GRIN2BQ13224 1484 aa12.17□□□□□ -0.46
DDX47-201ENST00000352940 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
DDX47-201ENST00000352940 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
DDX47-201ENST00000352940 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
DDX47-201ENST00000352940 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
DDX47-201ENST00000352940 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
DDX47-201ENST00000352940 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
DDX47-201ENST00000352940 C7P10643 843 aa12.13□□□□□ -0.47
DDX47-201ENST00000352940 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
DDX47-201ENST00000352940 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
DDX47-201ENST00000352940 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
DDX47-201ENST00000352940 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
DDX47-201ENST00000352940 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
DDX47-201ENST00000352940 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
DDX47-201ENST00000352940 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
DDX47-201ENST00000352940 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
DDX47-201ENST00000352940 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
DDX47-201ENST00000352940 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
DDX47-201ENST00000352940 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
DDX47-201ENST00000352940 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
DDX47-201ENST00000352940 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
DDX47-201ENST00000352940 GRIN2AQ12879 1464 aa12.01□□□□□ -0.49
DDX47-201ENST00000352940 ADAMTS12P58397 1594 aa12□□□□□ -0.49
DDX47-201ENST00000352940 BIVM-ERCC5R4GMW8 1640 aa11.99□□□□□ -0.49
DDX47-201ENST00000352940 CEP170Q5SW79 1584 aa11.99□□□□□ -0.49
DDX47-201ENST00000352940 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
DDX47-201ENST00000352940 NUP160Q12769 1436 aa11.95□□□□□ -0.5
DDX47-201ENST00000352940 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
DDX47-201ENST00000352940 FHAD1B1AJZ9 1412 aa11.95□□□□□ -0.5
DDX47-201ENST00000352940 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
DDX47-201ENST00000352940 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
DDX47-201ENST00000352940 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
DDX47-201ENST00000352940 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
DDX47-201ENST00000352940 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms