RNA–Protein interactions for RNA: ENST00000352940.8

DDX47-201, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best) BASIC

Gene DDX47, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-201ENST00000352940 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
DDX47-201ENST00000352940 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
DDX47-201ENST00000352940 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
DDX47-201ENST00000352940 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
DDX47-201ENST00000352940 FOXD1Q16676 465 aa19.96■□□□□ 0.79
DDX47-201ENST00000352940 POTEDQ86YR6 584 aa19.33■□□□□ 0.69
DDX47-201ENST00000352940 MSH5O43196 834 aa19.05■□□□□ 0.64
DDX47-201ENST00000352940 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
DDX47-201ENST00000352940 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
DDX47-201ENST00000352940 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
DDX47-201ENST00000352940 ADRA2BP18089 450 aa18.12■□□□□ 0.49
DDX47-201ENST00000352940 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
DDX47-201ENST00000352940 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
DDX47-201ENST00000352940 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
DDX47-201ENST00000352940 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
DDX47-201ENST00000352940 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
DDX47-201ENST00000352940 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
DDX47-201ENST00000352940 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
DDX47-201ENST00000352940 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
DDX47-201ENST00000352940 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
DDX47-201ENST00000352940 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
DDX47-201ENST00000352940 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
DDX47-201ENST00000352940 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
DDX47-201ENST00000352940 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
DDX47-201ENST00000352940 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
DDX47-201ENST00000352940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.052e-7■□□□□ 10.8
DDX47-201ENST00000352940 ABCC9O60706 1549 aa15.3■□□□□ 0.04
DDX47-201ENST00000352940 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
DDX47-201ENST00000352940 POTEHQ6S545 545 aa15.09■□□□□ 0.01
DDX47-201ENST00000352940 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
DDX47-201ENST00000352940 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
DDX47-201ENST00000352940 CAPN15O75808 1086 aa14.9□□□□□ -0.02
DDX47-201ENST00000352940 DSG3P32926 999 aa14.89□□□□□ -0.03
DDX47-201ENST00000352940 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
DDX47-201ENST00000352940 APLP2Q06481 763 aa14.69□□□□□ -0.06
DDX47-201ENST00000352940 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
DDX47-201ENST00000352940 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
DDX47-201ENST00000352940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
DDX47-201ENST00000352940 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
DDX47-201ENST00000352940 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
DDX47-201ENST00000352940 ABCB7O75027 752 aa14.44□□□□□ -0.1
DDX47-201ENST00000352940 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
DDX47-201ENST00000352940 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
DDX47-201ENST00000352940 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
DDX47-201ENST00000352940 NACADO15069 1562 aa14.33□□□□□ -0.12
DDX47-201ENST00000352940 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
DDX47-201ENST00000352940 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
DDX47-201ENST00000352940 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
DDX47-201ENST00000352940 KCNA4P22459 653 aa14.17□□□□□ -0.14
DDX47-201ENST00000352940 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
DDX47-201ENST00000352940 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
DDX47-201ENST00000352940 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
DDX47-201ENST00000352940 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
DDX47-201ENST00000352940 POLA2Q14181 598 aa13.97□□□□□ -0.17
DDX47-201ENST00000352940 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
DDX47-201ENST00000352940 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
DDX47-201ENST00000352940 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
DDX47-201ENST00000352940 SCRIBQ14160 1630 aa13.87□□□□□ -0.19
DDX47-201ENST00000352940 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
DDX47-201ENST00000352940 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
DDX47-201ENST00000352940 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
DDX47-201ENST00000352940 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
DDX47-201ENST00000352940 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
DDX47-201ENST00000352940 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
DDX47-201ENST00000352940 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
DDX47-201ENST00000352940 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
DDX47-201ENST00000352940 HAX1O00165 279 aa13.59□□□□□ -0.23
DDX47-201ENST00000352940 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
DDX47-201ENST00000352940 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX47-201ENST00000352940 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
DDX47-201ENST00000352940 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
DDX47-201ENST00000352940 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
DDX47-201ENST00000352940 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
DDX47-201ENST00000352940 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
DDX47-201ENST00000352940 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
DDX47-201ENST00000352940 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
DDX47-201ENST00000352940 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
DDX47-201ENST00000352940 FBLN2P98095 1184 aa13.24□□□□□ -0.29
DDX47-201ENST00000352940 EVX2Q03828 476 aa13.23□□□□□ -0.29
DDX47-201ENST00000352940 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
DDX47-201ENST00000352940 ERCC6Q03468 1493 aa13.21□□□□□ -0.29
DDX47-201ENST00000352940 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
DDX47-201ENST00000352940 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
DDX47-201ENST00000352940 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
DDX47-201ENST00000352940 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
DDX47-201ENST00000352940 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
DDX47-201ENST00000352940 CUX2O14529 1486 aa13.16□□□□□ -0.3
DDX47-201ENST00000352940 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
DDX47-201ENST00000352940 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
DDX47-201ENST00000352940 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
DDX47-201ENST00000352940 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
DDX47-201ENST00000352940 NESP48681 1621 aa13.12□□□□□ -0.31
DDX47-201ENST00000352940 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
DDX47-201ENST00000352940 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
DDX47-201ENST00000352940 LHX8Q68G74 356 aa13.03□□□□□ -0.32
DDX47-201ENST00000352940 GABBR2O75899 941 aa13.02□□□□□ -0.32
DDX47-201ENST00000352940 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
DDX47-201ENST00000352940 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
DDX47-201ENST00000352940 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
DDX47-201ENST00000352940 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms