RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
COG3-201ENST00000349995 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
COG3-201ENST00000349995 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
COG3-201ENST00000349995 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
COG3-201ENST00000349995 ZNF777Q9ULD5 760 aaPredicted RBP20.49■□□□□ 0.87
COG3-201ENST00000349995 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
COG3-201ENST00000349995 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
COG3-201ENST00000349995 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
COG3-201ENST00000349995 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
COG3-201ENST00000349995 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
COG3-201ENST00000349995 CHIC2Q9UKJ5 165 aa20.45■□□□□ 0.86
COG3-201ENST00000349995 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
COG3-201ENST00000349995 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
COG3-201ENST00000349995 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
COG3-201ENST00000349995 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
COG3-201ENST00000349995 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
COG3-201ENST00000349995 CUX2O14529 1486 aa20.34■□□□□ 0.85
COG3-201ENST00000349995 PPM1GO15355 546 aaPredicted RBP20.32■□□□□ 0.84
COG3-201ENST00000349995 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
COG3-201ENST00000349995 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
COG3-201ENST00000349995 ARID4BQ4LE39 1312 aaPredicted RBP20.3■□□□□ 0.84
COG3-201ENST00000349995 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
COG3-201ENST00000349995 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
COG3-201ENST00000349995 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
COG3-201ENST00000349995 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
COG3-201ENST00000349995 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
COG3-201ENST00000349995 TONSLQ96HA7 1378 aa20.25■□□□□ 0.83
COG3-201ENST00000349995 SENP3-EIF4A1A0A087X0R7 540 aa20.25■□□□□ 0.83
COG3-201ENST00000349995 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
COG3-201ENST00000349995 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
COG3-201ENST00000349995 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
COG3-201ENST00000349995 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
COG3-201ENST00000349995 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
COG3-201ENST00000349995 TRIM44Q96DX7 344 aaPredicted RBP20.17■□□□□ 0.82
COG3-201ENST00000349995 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
COG3-201ENST00000349995 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
COG3-201ENST00000349995 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.81
COG3-201ENST00000349995 PKNOX2Q96KN3 472 aa20.13■□□□□ 0.81
COG3-201ENST00000349995 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
COG3-201ENST00000349995 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
COG3-201ENST00000349995 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
COG3-201ENST00000349995 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
COG3-201ENST00000349995 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
COG3-201ENST00000349995 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
COG3-201ENST00000349995 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
COG3-201ENST00000349995 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.8
COG3-201ENST00000349995 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
COG3-201ENST00000349995 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
COG3-201ENST00000349995 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
COG3-201ENST00000349995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.794e-8■■■□□ 15.7
COG3-201ENST00000349995 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
COG3-201ENST00000349995 IPO9Q96P70 1041 aaKnown RBP20■□□□□ 0.79
COG3-201ENST00000349995 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
COG3-201ENST00000349995 TSPY4P0CV99 314 aa19.99■□□□□ 0.79
COG3-201ENST00000349995 TSPY10P0CW01 314 aa19.99■□□□□ 0.79
COG3-201ENST00000349995 HSP90AA2PQ14568 343 aaPredicted RBP19.99■□□□□ 0.79
COG3-201ENST00000349995 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
COG3-201ENST00000349995 ARID3AQ99856 593 aa19.98■□□□□ 0.79
COG3-201ENST00000349995 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
COG3-201ENST00000349995 A0A0U1RQG5 324 aaPredicted RBP19.96■□□□□ 0.79
COG3-201ENST00000349995 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
COG3-201ENST00000349995 KDM2AQ9Y2K7 1162 aa19.96■□□□□ 0.79
COG3-201ENST00000349995 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
COG3-201ENST00000349995 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
COG3-201ENST00000349995 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
COG3-201ENST00000349995 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
COG3-201ENST00000349995 CDK11BP21127 795 aaKnown RBP19.92■□□□□ 0.78
COG3-201ENST00000349995 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
COG3-201ENST00000349995 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
COG3-201ENST00000349995 BECN1Q14457 450 aa19.9■□□□□ 0.78
COG3-201ENST00000349995 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
COG3-201ENST00000349995 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
COG3-201ENST00000349995 IGF1RP08069 1367 aa19.85■□□□□ 0.77
COG3-201ENST00000349995 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
COG3-201ENST00000349995 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
COG3-201ENST00000349995 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.77
COG3-201ENST00000349995 RGS3P49796 1198 aa19.82■□□□□ 0.76
COG3-201ENST00000349995 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
COG3-201ENST00000349995 DNTTIP2Q5QJE6 756 aaKnown RBP19.81■□□□□ 0.76
COG3-201ENST00000349995 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
COG3-201ENST00000349995 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
COG3-201ENST00000349995 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
COG3-201ENST00000349995 GSE1Q14687 1217 aa19.8■□□□□ 0.76
COG3-201ENST00000349995 MSH5O43196 834 aa19.79■□□□□ 0.76
COG3-201ENST00000349995 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
COG3-201ENST00000349995 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.78■□□□□ 0.76
COG3-201ENST00000349995 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
COG3-201ENST00000349995 CCER2I3L3R5 266 aa19.78■□□□□ 0.76
COG3-201ENST00000349995 RGL3Q3MIN7 710 aa19.78■□□□□ 0.76
COG3-201ENST00000349995 BRPF3Q9ULD4 1205 aa19.78■□□□□ 0.76
COG3-201ENST00000349995 GZF1Q9H116 711 aaPredicted RBP19.77■□□□□ 0.76
COG3-201ENST00000349995 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
COG3-201ENST00000349995 FOXD1Q16676 465 aa19.76■□□□□ 0.75
COG3-201ENST00000349995 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
COG3-201ENST00000349995 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
COG3-201ENST00000349995 UBE2Q2Q8WVN8 375 aa19.75■□□□□ 0.75
COG3-201ENST00000349995 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
COG3-201ENST00000349995 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
COG3-201ENST00000349995 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
COG3-201ENST00000349995 PTMAP06454 111 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 1305.2 ms