RNA–Protein interactions for RNA: ENST00000349953.7

PARD3B-201, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-201ENST00000349953 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
PARD3B-201ENST00000349953 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
PARD3B-201ENST00000349953 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
PARD3B-201ENST00000349953 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
PARD3B-201ENST00000349953 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
PARD3B-201ENST00000349953 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
PARD3B-201ENST00000349953 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
PARD3B-201ENST00000349953 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
PARD3B-201ENST00000349953 MIER1Q8N108 512 aa17.17■□□□□ 0.34
PARD3B-201ENST00000349953 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
PARD3B-201ENST00000349953 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
PARD3B-201ENST00000349953 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
PARD3B-201ENST00000349953 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
PARD3B-201ENST00000349953 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
PARD3B-201ENST00000349953 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.33
PARD3B-201ENST00000349953 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
PARD3B-201ENST00000349953 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
PARD3B-201ENST00000349953 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
PARD3B-201ENST00000349953 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
PARD3B-201ENST00000349953 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
PARD3B-201ENST00000349953 CUL7Q14999 1698 aa17.05■□□□□ 0.32
PARD3B-201ENST00000349953 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
PARD3B-201ENST00000349953 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
PARD3B-201ENST00000349953 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
PARD3B-201ENST00000349953 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
PARD3B-201ENST00000349953 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
PARD3B-201ENST00000349953 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
PARD3B-201ENST00000349953 MAP3K1Q13233 1512 aa16.99■□□□□ 0.31
PARD3B-201ENST00000349953 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
PARD3B-201ENST00000349953 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
PARD3B-201ENST00000349953 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
PARD3B-201ENST00000349953 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
PARD3B-201ENST00000349953 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
PARD3B-201ENST00000349953 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
PARD3B-201ENST00000349953 HIRIP3Q9BW71 556 aaPredicted RBP16.96■□□□□ 0.31
PARD3B-201ENST00000349953 FMN1Q68DA7 1419 aa16.96■□□□□ 0.3
PARD3B-201ENST00000349953 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
PARD3B-201ENST00000349953 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
PARD3B-201ENST00000349953 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
PARD3B-201ENST00000349953 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
PARD3B-201ENST00000349953 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
PARD3B-201ENST00000349953 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
PARD3B-201ENST00000349953 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
PARD3B-201ENST00000349953 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
PARD3B-201ENST00000349953 FBLN2P98095 1184 aa16.89■□□□□ 0.29
PARD3B-201ENST00000349953 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.29
PARD3B-201ENST00000349953 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
PARD3B-201ENST00000349953 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
PARD3B-201ENST00000349953 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
PARD3B-201ENST00000349953 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
PARD3B-201ENST00000349953 CDK13Q14004 1512 aaKnown RBP16.85■□□□□ 0.29
PARD3B-201ENST00000349953 KCNH8Q96L42 1107 aa16.83■□□□□ 0.29
PARD3B-201ENST00000349953 ADAMTS12P58397 1594 aa16.82■□□□□ 0.28
PARD3B-201ENST00000349953 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
PARD3B-201ENST00000349953 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
PARD3B-201ENST00000349953 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
PARD3B-201ENST00000349953 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
PARD3B-201ENST00000349953 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
PARD3B-201ENST00000349953 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
PARD3B-201ENST00000349953 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
PARD3B-201ENST00000349953 FOXD1Q16676 465 aa16.75■□□□□ 0.27
PARD3B-201ENST00000349953 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
PARD3B-201ENST00000349953 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
PARD3B-201ENST00000349953 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
PARD3B-201ENST00000349953 NAIPQ13075 1403 aa16.73■□□□□ 0.27
PARD3B-201ENST00000349953 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
PARD3B-201ENST00000349953 WDR62O43379 1518 aa16.73■□□□□ 0.27
PARD3B-201ENST00000349953 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
PARD3B-201ENST00000349953 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
PARD3B-201ENST00000349953 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
PARD3B-201ENST00000349953 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
PARD3B-201ENST00000349953 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
PARD3B-201ENST00000349953 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
PARD3B-201ENST00000349953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.26
PARD3B-201ENST00000349953 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
PARD3B-201ENST00000349953 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
PARD3B-201ENST00000349953 KDM6BO15054 1643 aa16.68■□□□□ 0.26
PARD3B-201ENST00000349953 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
PARD3B-201ENST00000349953 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
PARD3B-201ENST00000349953 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
PARD3B-201ENST00000349953 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
PARD3B-201ENST00000349953 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PARD3B-201ENST00000349953 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
PARD3B-201ENST00000349953 PLB1Q6P1J6 1458 aa16.64■□□□□ 0.25
PARD3B-201ENST00000349953 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
PARD3B-201ENST00000349953 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
PARD3B-201ENST00000349953 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
PARD3B-201ENST00000349953 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
PARD3B-201ENST00000349953 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
PARD3B-201ENST00000349953 MYT1Q01538 1121 aa16.6■□□□□ 0.25
PARD3B-201ENST00000349953 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
PARD3B-201ENST00000349953 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
PARD3B-201ENST00000349953 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
PARD3B-201ENST00000349953 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
PARD3B-201ENST00000349953 RAPGEF6Q8TEU7 1601 aa16.54■□□□□ 0.24
PARD3B-201ENST00000349953 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
PARD3B-201ENST00000349953 ABCC5O15440 1437 aa16.52■□□□□ 0.24
PARD3B-201ENST00000349953 CFDP1Q9UEE9 299 aaPredicted RBP16.52■□□□□ 0.24
PARD3B-201ENST00000349953 DAPK1P53355 1430 aa16.52■□□□□ 0.23
PARD3B-201ENST00000349953 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms