RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
MBD1-204ENST00000347968 UBE2Q2Q8WVN8 375 aa22.64■■□□□ 1.22
MBD1-204ENST00000347968 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
MBD1-204ENST00000347968 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
MBD1-204ENST00000347968 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
MBD1-204ENST00000347968 ERICH6BQ5W0A0 696 aa22.61■■□□□ 1.21
MBD1-204ENST00000347968 CUX1P39880 1505 aa22.61■■□□□ 1.21
MBD1-204ENST00000347968 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
MBD1-204ENST00000347968 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
MBD1-204ENST00000347968 EEA1Q15075 1411 aa22.59■■□□□ 1.21
MBD1-204ENST00000347968 HNRNPUQ00839 825 aaKnown RBP eCLIP22.59■■□□□ 1.21
MBD1-204ENST00000347968 NESP48681 1621 aa22.56■■□□□ 1.2
MBD1-204ENST00000347968 ANP32CO43423 234 aa22.55■■□□□ 1.2
MBD1-204ENST00000347968 CLIP1P30622 1438 aa22.5■■□□□ 1.19
MBD1-204ENST00000347968 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
MBD1-204ENST00000347968 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
MBD1-204ENST00000347968 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
MBD1-204ENST00000347968 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
MBD1-204ENST00000347968 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.19
MBD1-204ENST00000347968 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
MBD1-204ENST00000347968 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
MBD1-204ENST00000347968 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
MBD1-204ENST00000347968 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
MBD1-204ENST00000347968 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
MBD1-204ENST00000347968 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
MBD1-204ENST00000347968 LAS1LQ9Y4W2 734 aaKnown RBP22.38■■□□□ 1.17
MBD1-204ENST00000347968 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
MBD1-204ENST00000347968 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
MBD1-204ENST00000347968 BRPF3Q9ULD4 1205 aa22.35■■□□□ 1.17
MBD1-204ENST00000347968 KIF21BO75037 1637 aa22.34■■□□□ 1.17
MBD1-204ENST00000347968 NPM2Q86SE8 214 aaKnown RBP22.33■■□□□ 1.17
MBD1-204ENST00000347968 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
MBD1-204ENST00000347968 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
MBD1-204ENST00000347968 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
MBD1-204ENST00000347968 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
MBD1-204ENST00000347968 ANP32AP39687 249 aaKnown RBP22.32■■□□□ 1.16
MBD1-204ENST00000347968 CUX2O14529 1486 aa22.31■■□□□ 1.16
MBD1-204ENST00000347968 IPO9Q96P70 1041 aaKnown RBP22.29■■□□□ 1.16
MBD1-204ENST00000347968 NEFMP07197 916 aa22.26■■□□□ 1.15
MBD1-204ENST00000347968 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
MBD1-204ENST00000347968 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
MBD1-204ENST00000347968 PKNOX2Q96KN3 472 aa22.24■■□□□ 1.15
MBD1-204ENST00000347968 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
MBD1-204ENST00000347968 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
MBD1-204ENST00000347968 CCDC184Q52MB2 194 aa22.2■■□□□ 1.14
MBD1-204ENST00000347968 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
MBD1-204ENST00000347968 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
MBD1-204ENST00000347968 IGF1RP08069 1367 aa22.17■■□□□ 1.14
MBD1-204ENST00000347968 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
MBD1-204ENST00000347968 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
MBD1-204ENST00000347968 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
MBD1-204ENST00000347968 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.13
MBD1-204ENST00000347968 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
MBD1-204ENST00000347968 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
MBD1-204ENST00000347968 CNGB1Q14028 1251 aaPredicted RBP22.1■■□□□ 1.13
MBD1-204ENST00000347968 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
MBD1-204ENST00000347968 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
MBD1-204ENST00000347968 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
MBD1-204ENST00000347968 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
MBD1-204ENST00000347968 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
MBD1-204ENST00000347968 TDRD9Q8NDG6 1382 aaKnown RBP22.05■■□□□ 1.12
MBD1-204ENST00000347968 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
MBD1-204ENST00000347968 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
MBD1-204ENST00000347968 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
MBD1-204ENST00000347968 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
MBD1-204ENST00000347968 WASHC2CQ9Y4E1 1318 aa21.97■■□□□ 1.11
MBD1-204ENST00000347968 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
MBD1-204ENST00000347968 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
MBD1-204ENST00000347968 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
MBD1-204ENST00000347968 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
MBD1-204ENST00000347968 MRS2Q9HD23 443 aa21.92■■□□□ 1.1
MBD1-204ENST00000347968 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
MBD1-204ENST00000347968 FRAT1Q92837 279 aaPredicted RBP21.91■■□□□ 1.1
MBD1-204ENST00000347968 SLC4A3P48751 1232 aa21.91■■□□□ 1.1
MBD1-204ENST00000347968 GSE1Q14687 1217 aa21.9■■□□□ 1.1
MBD1-204ENST00000347968 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
MBD1-204ENST00000347968 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
MBD1-204ENST00000347968 ZMYND15Q9H091 742 aa21.85■■□□□ 1.09
MBD1-204ENST00000347968 SKAP1Q86WV1 359 aa21.84■■□□□ 1.09
MBD1-204ENST00000347968 TONSLQ96HA7 1378 aa21.83■■□□□ 1.09
MBD1-204ENST00000347968 USP35Q9P2H5 1018 aa21.83■■□□□ 1.09
MBD1-204ENST00000347968 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.09
MBD1-204ENST00000347968 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.08
MBD1-204ENST00000347968 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.086e-7■■■□□ 18.9
MBD1-204ENST00000347968 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
MBD1-204ENST00000347968 ZBED9Q6R2W3 1325 aa21.79■■□□□ 1.08
MBD1-204ENST00000347968 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
MBD1-204ENST00000347968 NFKBIBQ15653 356 aa21.78■■□□□ 1.08
MBD1-204ENST00000347968 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
MBD1-204ENST00000347968 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
MBD1-204ENST00000347968 PDE4AP27815 886 aa21.77■■□□□ 1.08
MBD1-204ENST00000347968 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
MBD1-204ENST00000347968 HSPA5P11021 654 aaKnown RBP21.75■■□□□ 1.07
MBD1-204ENST00000347968 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
MBD1-204ENST00000347968 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
MBD1-204ENST00000347968 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
MBD1-204ENST00000347968 PRKRIP1Q9H875 184 aaPredicted RBP21.71■■□□□ 1.07
MBD1-204ENST00000347968 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
MBD1-204ENST00000347968 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
MBD1-204ENST00000347968 ARXQ96QS3 562 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms