RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 CFTRP13569 1480 aa20.9■□□□□ 0.94
SMTN-202ENST00000347557 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
SMTN-202ENST00000347557 HMGXB3Q12766 1538 aa20.85■□□□□ 0.93
SMTN-202ENST00000347557 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.92
SMTN-202ENST00000347557 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
SMTN-202ENST00000347557 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
SMTN-202ENST00000347557 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
SMTN-202ENST00000347557 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
SMTN-202ENST00000347557 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
SMTN-202ENST00000347557 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
SMTN-202ENST00000347557 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
SMTN-202ENST00000347557 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
SMTN-202ENST00000347557 FKBP8Q14318 412 aa20.71■□□□□ 0.91
SMTN-202ENST00000347557 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
SMTN-202ENST00000347557 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
SMTN-202ENST00000347557 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
SMTN-202ENST00000347557 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
SMTN-202ENST00000347557 TSHZ2Q9NRE2 1034 aa20.65■□□□□ 0.9
SMTN-202ENST00000347557 ANP32CO43423 234 aa20.64■□□□□ 0.89
SMTN-202ENST00000347557 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
SMTN-202ENST00000347557 NEFLP07196 543 aa20.6■□□□□ 0.89
SMTN-202ENST00000347557 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
SMTN-202ENST00000347557 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
SMTN-202ENST00000347557 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.89
SMTN-202ENST00000347557 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.88
SMTN-202ENST00000347557 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
SMTN-202ENST00000347557 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
SMTN-202ENST00000347557 ANP32EQ9BTT0 268 aa20.55■□□□□ 0.88
SMTN-202ENST00000347557 MAP3K1Q13233 1512 aa20.52■□□□□ 0.88
SMTN-202ENST00000347557 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
SMTN-202ENST00000347557 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
SMTN-202ENST00000347557 NESP48681 1621 aa20.5■□□□□ 0.87
SMTN-202ENST00000347557 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
SMTN-202ENST00000347557 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
SMTN-202ENST00000347557 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
SMTN-202ENST00000347557 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
SMTN-202ENST00000347557 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
SMTN-202ENST00000347557 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
SMTN-202ENST00000347557 FYCO1Q9BQS8 1478 aa20.42■□□□□ 0.86
SMTN-202ENST00000347557 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMTN-202ENST00000347557 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
SMTN-202ENST00000347557 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
SMTN-202ENST00000347557 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
SMTN-202ENST00000347557 FMN1Q68DA7 1419 aa20.4■□□□□ 0.86
SMTN-202ENST00000347557 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
SMTN-202ENST00000347557 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
SMTN-202ENST00000347557 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
SMTN-202ENST00000347557 CFAP43Q8NDM7 1665 aa20.38■□□□□ 0.85
SMTN-202ENST00000347557 FOXD1Q16676 465 aa20.37■□□□□ 0.85
SMTN-202ENST00000347557 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
SMTN-202ENST00000347557 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.85
SMTN-202ENST00000347557 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
SMTN-202ENST00000347557 EFCAB5A4FU69 1503 aa20.31■□□□□ 0.84
SMTN-202ENST00000347557 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
SMTN-202ENST00000347557 UACAQ9BZF9 1416 aa20.3■□□□□ 0.84
SMTN-202ENST00000347557 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
SMTN-202ENST00000347557 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.846e-8■■■■■ 47.6
SMTN-202ENST00000347557 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
SMTN-202ENST00000347557 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
SMTN-202ENST00000347557 NAIPQ13075 1403 aa20.28■□□□□ 0.84
SMTN-202ENST00000347557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMTN-202ENST00000347557 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
SMTN-202ENST00000347557 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
SMTN-202ENST00000347557 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
SMTN-202ENST00000347557 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
SMTN-202ENST00000347557 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMTN-202ENST00000347557 WASHC2AQ641Q2 1341 aa20.23■□□□□ 0.83
SMTN-202ENST00000347557 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
SMTN-202ENST00000347557 PTPN23Q9H3S7 1636 aa20.22■□□□□ 0.83
SMTN-202ENST00000347557 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
SMTN-202ENST00000347557 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
SMTN-202ENST00000347557 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
SMTN-202ENST00000347557 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
SMTN-202ENST00000347557 CUL7Q14999 1698 aa20.19■□□□□ 0.82
SMTN-202ENST00000347557 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
SMTN-202ENST00000347557 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
SMTN-202ENST00000347557 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
SMTN-202ENST00000347557 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
SMTN-202ENST00000347557 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
SMTN-202ENST00000347557 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
SMTN-202ENST00000347557 ZNF644Q9H582 1327 aaPredicted RBP20.11■□□□□ 0.81
SMTN-202ENST00000347557 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
SMTN-202ENST00000347557 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
SMTN-202ENST00000347557 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
SMTN-202ENST00000347557 SUPT6HQ7KZ85 1726 aaKnown RBP20.09■□□□□ 0.81
SMTN-202ENST00000347557 MAGI3Q5TCQ9 1506 aa20.08■□□□□ 0.81
SMTN-202ENST00000347557 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
SMTN-202ENST00000347557 CDK13Q14004 1512 aaKnown RBP20.07■□□□□ 0.8
SMTN-202ENST00000347557 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
SMTN-202ENST00000347557 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
SMTN-202ENST00000347557 LRRIQ1Q96JM4 1722 aa20.06■□□□□ 0.8
SMTN-202ENST00000347557 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
SMTN-202ENST00000347557 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
SMTN-202ENST00000347557 UGGT2Q9NYU1 1516 aa20.03■□□□□ 0.8
SMTN-202ENST00000347557 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
SMTN-202ENST00000347557 KDM6BO15054 1643 aa20.02■□□□□ 0.8
SMTN-202ENST00000347557 KDM5BQ9UGL1 1544 aa20.01■□□□□ 0.79
SMTN-202ENST00000347557 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
SMTN-202ENST00000347557 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
SMTN-202ENST00000347557 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms