RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
ARHGEF1-202ENST00000347545 NESP48681 1621 aa21.42■■□□□ 1.02
ARHGEF1-202ENST00000347545 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
ARHGEF1-202ENST00000347545 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
ARHGEF1-202ENST00000347545 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF1-202ENST00000347545 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
ARHGEF1-202ENST00000347545 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
ARHGEF1-202ENST00000347545 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
ARHGEF1-202ENST00000347545 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
ARHGEF1-202ENST00000347545 CUL7Q14999 1698 aa21.35■■□□□ 1.01
ARHGEF1-202ENST00000347545 ITGAEP38570 1179 aa21.35■■□□□ 1.01
ARHGEF1-202ENST00000347545 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
ARHGEF1-202ENST00000347545 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
ARHGEF1-202ENST00000347545 FHOD3Q2V2M9 1422 aa21.31■■□□□ 1
ARHGEF1-202ENST00000347545 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
ARHGEF1-202ENST00000347545 P3H3Q8IVL6 736 aa21.29■■□□□ 1
ARHGEF1-202ENST00000347545 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
ARHGEF1-202ENST00000347545 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
ARHGEF1-202ENST00000347545 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
ARHGEF1-202ENST00000347545 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
ARHGEF1-202ENST00000347545 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
ARHGEF1-202ENST00000347545 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
ARHGEF1-202ENST00000347545 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.991e-6■■■■■ 36
ARHGEF1-202ENST00000347545 CASKIN1Q8WXD9 1431 aa21.22■□□□□ 0.99
ARHGEF1-202ENST00000347545 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
ARHGEF1-202ENST00000347545 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
ARHGEF1-202ENST00000347545 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
ARHGEF1-202ENST00000347545 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
ARHGEF1-202ENST00000347545 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF1-202ENST00000347545 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
ARHGEF1-202ENST00000347545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.974e-7■□□□□ 8.1
ARHGEF1-202ENST00000347545 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
ARHGEF1-202ENST00000347545 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.96
ARHGEF1-202ENST00000347545 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
ARHGEF1-202ENST00000347545 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
ARHGEF1-202ENST00000347545 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
ARHGEF1-202ENST00000347545 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
ARHGEF1-202ENST00000347545 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
ARHGEF1-202ENST00000347545 MYT1Q01538 1121 aa21.03■□□□□ 0.96
ARHGEF1-202ENST00000347545 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
ARHGEF1-202ENST00000347545 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
ARHGEF1-202ENST00000347545 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
ARHGEF1-202ENST00000347545 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
ARHGEF1-202ENST00000347545 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
ARHGEF1-202ENST00000347545 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-202ENST00000347545 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
ARHGEF1-202ENST00000347545 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
ARHGEF1-202ENST00000347545 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
ARHGEF1-202ENST00000347545 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
ARHGEF1-202ENST00000347545 EHBP1L1Q8N3D4 1523 aa20.93■□□□□ 0.94
ARHGEF1-202ENST00000347545 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
ARHGEF1-202ENST00000347545 HFM1A2PYH4 1435 aa20.92■□□□□ 0.94
ARHGEF1-202ENST00000347545 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
ARHGEF1-202ENST00000347545 MYOM3Q5VTT5 1437 aa20.92■□□□□ 0.94
ARHGEF1-202ENST00000347545 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
ARHGEF1-202ENST00000347545 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
ARHGEF1-202ENST00000347545 NAIPQ13075 1403 aa20.88■□□□□ 0.93
ARHGEF1-202ENST00000347545 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
ARHGEF1-202ENST00000347545 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF1-202ENST00000347545 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
ARHGEF1-202ENST00000347545 IQGAP2Q13576 1575 aa20.84■□□□□ 0.93
ARHGEF1-202ENST00000347545 HECW1Q76N89 1606 aa20.83■□□□□ 0.93
ARHGEF1-202ENST00000347545 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
ARHGEF1-202ENST00000347545 GCC2Q8IWJ2 1684 aa20.82■□□□□ 0.92
ARHGEF1-202ENST00000347545 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
ARHGEF1-202ENST00000347545 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
ARHGEF1-202ENST00000347545 SUPT16HQ9Y5B9 1047 aaKnown RBP20.8■□□□□ 0.92
ARHGEF1-202ENST00000347545 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF1-202ENST00000347545 WDR62O43379 1518 aa20.78■□□□□ 0.92
ARHGEF1-202ENST00000347545 KDM6BO15054 1643 aa20.78■□□□□ 0.92
ARHGEF1-202ENST00000347545 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
ARHGEF1-202ENST00000347545 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
ARHGEF1-202ENST00000347545 DENND4BO75064 1496 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF1-202ENST00000347545 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
ARHGEF1-202ENST00000347545 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
ARHGEF1-202ENST00000347545 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF1-202ENST00000347545 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
ARHGEF1-202ENST00000347545 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
ARHGEF1-202ENST00000347545 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
ARHGEF1-202ENST00000347545 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
ARHGEF1-202ENST00000347545 DISP1Q96F81 1524 aa20.64■□□□□ 0.89
ARHGEF1-202ENST00000347545 MIA2Q96PC5 1412 aa20.63■□□□□ 0.89
ARHGEF1-202ENST00000347545 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
ARHGEF1-202ENST00000347545 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
ARHGEF1-202ENST00000347545 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
ARHGEF1-202ENST00000347545 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
ARHGEF1-202ENST00000347545 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.88
ARHGEF1-202ENST00000347545 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
ARHGEF1-202ENST00000347545 DNMT1P26358 1616 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-202ENST00000347545 RAPGEF6Q8TEU7 1601 aa20.57■□□□□ 0.88
ARHGEF1-202ENST00000347545 ANP32CO43423 234 aa20.54■□□□□ 0.88
ARHGEF1-202ENST00000347545 DAPK1P53355 1430 aa20.53■□□□□ 0.88
ARHGEF1-202ENST00000347545 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
ARHGEF1-202ENST00000347545 ABCC5O15440 1437 aa20.5■□□□□ 0.87
ARHGEF1-202ENST00000347545 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
ARHGEF1-202ENST00000347545 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
ARHGEF1-202ENST00000347545 ROCK1Q13464 1354 aa20.48■□□□□ 0.87
ARHGEF1-202ENST00000347545 ZNF644Q9H582 1327 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF1-202ENST00000347545 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
ARHGEF1-202ENST00000347545 FOXD1Q16676 465 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms