RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.48
ARHGEF1-202ENST00000347545 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
ARHGEF1-202ENST00000347545 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
ARHGEF1-202ENST00000347545 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
ARHGEF1-202ENST00000347545 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
ARHGEF1-202ENST00000347545 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
ARHGEF1-202ENST00000347545 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
ARHGEF1-202ENST00000347545 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
ARHGEF1-202ENST00000347545 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
ARHGEF1-202ENST00000347545 ABCC9O60706 1549 aa24.42■■□□□ 1.5
ARHGEF1-202ENST00000347545 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
ARHGEF1-202ENST00000347545 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
ARHGEF1-202ENST00000347545 NACADO15069 1562 aa23.98■■□□□ 1.43
ARHGEF1-202ENST00000347545 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
ARHGEF1-202ENST00000347545 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
ARHGEF1-202ENST00000347545 HRCP23327 699 aa23.92■■□□□ 1.42
ARHGEF1-202ENST00000347545 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
ARHGEF1-202ENST00000347545 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
ARHGEF1-202ENST00000347545 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
ARHGEF1-202ENST00000347545 WIZO95785 1651 aa23.66■■□□□ 1.38
ARHGEF1-202ENST00000347545 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
ARHGEF1-202ENST00000347545 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
ARHGEF1-202ENST00000347545 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.34
ARHGEF1-202ENST00000347545 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
ARHGEF1-202ENST00000347545 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
ARHGEF1-202ENST00000347545 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
ARHGEF1-202ENST00000347545 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF1-202ENST00000347545 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
ARHGEF1-202ENST00000347545 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
ARHGEF1-202ENST00000347545 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
ARHGEF1-202ENST00000347545 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
ARHGEF1-202ENST00000347545 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
ARHGEF1-202ENST00000347545 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
ARHGEF1-202ENST00000347545 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
ARHGEF1-202ENST00000347545 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
ARHGEF1-202ENST00000347545 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.259e-7■■■□□ 16.5
ARHGEF1-202ENST00000347545 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
ARHGEF1-202ENST00000347545 SOGA1O94964 1423 aa22.81■■□□□ 1.24
ARHGEF1-202ENST00000347545 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
ARHGEF1-202ENST00000347545 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.22
ARHGEF1-202ENST00000347545 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
ARHGEF1-202ENST00000347545 EEA1Q15075 1411 aa22.65■■□□□ 1.22
ARHGEF1-202ENST00000347545 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
ARHGEF1-202ENST00000347545 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
ARHGEF1-202ENST00000347545 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
ARHGEF1-202ENST00000347545 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.2
ARHGEF1-202ENST00000347545 GOLGA3Q08378 1498 aa22.52■■□□□ 1.2
ARHGEF1-202ENST00000347545 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
ARHGEF1-202ENST00000347545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
ARHGEF1-202ENST00000347545 KIF21BO75037 1637 aa22.47■■□□□ 1.19
ARHGEF1-202ENST00000347545 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF1-202ENST00000347545 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
ARHGEF1-202ENST00000347545 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
ARHGEF1-202ENST00000347545 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
ARHGEF1-202ENST00000347545 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
ARHGEF1-202ENST00000347545 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
ARHGEF1-202ENST00000347545 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
ARHGEF1-202ENST00000347545 CLIP1P30622 1438 aa22.24■■□□□ 1.15
ARHGEF1-202ENST00000347545 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
ARHGEF1-202ENST00000347545 VPS8Q8N3P4 1428 aa22.17■■□□□ 1.14
ARHGEF1-202ENST00000347545 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
ARHGEF1-202ENST00000347545 CUX1P39880 1505 aa22.11■■□□□ 1.13
ARHGEF1-202ENST00000347545 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.12
ARHGEF1-202ENST00000347545 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
ARHGEF1-202ENST00000347545 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
ARHGEF1-202ENST00000347545 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
ARHGEF1-202ENST00000347545 PRDM2Q13029 1718 aa22■■□□□ 1.11
ARHGEF1-202ENST00000347545 CFTRP13569 1480 aa22■■□□□ 1.11
ARHGEF1-202ENST00000347545 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
ARHGEF1-202ENST00000347545 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF1-202ENST00000347545 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
ARHGEF1-202ENST00000347545 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.11
ARHGEF1-202ENST00000347545 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
ARHGEF1-202ENST00000347545 APLP2Q06481 763 aa21.84■■□□□ 1.09
ARHGEF1-202ENST00000347545 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF1-202ENST00000347545 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
ARHGEF1-202ENST00000347545 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
ARHGEF1-202ENST00000347545 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
ARHGEF1-202ENST00000347545 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF1-202ENST00000347545 CUX2O14529 1486 aa21.7■■□□□ 1.06
ARHGEF1-202ENST00000347545 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
ARHGEF1-202ENST00000347545 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
ARHGEF1-202ENST00000347545 IGF1RP08069 1367 aa21.68■■□□□ 1.06
ARHGEF1-202ENST00000347545 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
ARHGEF1-202ENST00000347545 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
ARHGEF1-202ENST00000347545 DHX57Q6P158 1386 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-202ENST00000347545 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
ARHGEF1-202ENST00000347545 TIAM1Q13009 1591 aa21.56■■□□□ 1.04
ARHGEF1-202ENST00000347545 MIER1Q8N108 512 aa21.54■■□□□ 1.04
ARHGEF1-202ENST00000347545 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
ARHGEF1-202ENST00000347545 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
ARHGEF1-202ENST00000347545 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
ARHGEF1-202ENST00000347545 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
ARHGEF1-202ENST00000347545 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
ARHGEF1-202ENST00000347545 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
ARHGEF1-202ENST00000347545 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
ARHGEF1-202ENST00000347545 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
ARHGEF1-202ENST00000347545 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
ARHGEF1-202ENST00000347545 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
ARHGEF1-202ENST00000347545 LRRC9Q6ZRR7 1453 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms