RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 CLSPNQ9HAW4 1339 aa31.65■■■□□ 2.66
CCDC38-201ENST00000344280 ACIN1Q9UKV3 1341 aaKnown RBP31.65■■■□□ 2.66
CCDC38-201ENST00000344280 LRRC9Q6ZRR7 1453 aa31.65■■■□□ 2.66
CCDC38-201ENST00000344280 FHOD3Q2V2M9 1422 aa31.63■■■□□ 2.65
CCDC38-201ENST00000344280 PCF11O94913 1555 aaKnown RBP31.63■■■□□ 2.65
CCDC38-201ENST00000344280 FHAD1B1AJZ9 1412 aa31.63■■■□□ 2.65
CCDC38-201ENST00000344280 CUL7Q14999 1698 aa31.59■■■□□ 2.65
CCDC38-201ENST00000344280 PHLDB1Q86UU1 1377 aa31.58■■■□□ 2.65
CCDC38-201ENST00000344280 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
CCDC38-201ENST00000344280 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
CCDC38-201ENST00000344280 ATP1B4Q9UN42 357 aaPredicted RBP31.56■■■□□ 2.64
CCDC38-201ENST00000344280 CFAP43Q8NDM7 1665 aa31.52■■■□□ 2.64
CCDC38-201ENST00000344280 CTTNBP2Q8WZ74 1663 aa31.5■■■□□ 2.63
CCDC38-201ENST00000344280 MIER1Q8N108 512 aa31.5■■■□□ 2.63
CCDC38-201ENST00000344280 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
CCDC38-201ENST00000344280 EFCAB5A4FU69 1503 aa31.49■■■□□ 2.63
CCDC38-201ENST00000344280 RAB3GAP2Q9H2M9 1393 aa31.47■■■□□ 2.63
CCDC38-201ENST00000344280 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
CCDC38-201ENST00000344280 CENPBP07199 599 aaPredicted RBP31.45■■■□□ 2.63
CCDC38-201ENST00000344280 KIF21AQ7Z4S6 1674 aa31.44■■■□□ 2.62
CCDC38-201ENST00000344280 FYCO1Q9BQS8 1478 aa31.44■■■□□ 2.62
CCDC38-201ENST00000344280 GAPVD1Q14C86 1478 aa31.43■■■□□ 2.62
CCDC38-201ENST00000344280 CASKIN1Q8WXD9 1431 aa31.43■■■□□ 2.62
CCDC38-201ENST00000344280 FAM50AQ14320 339 aaKnown RBP31.41■■■□□ 2.62
CCDC38-201ENST00000344280 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.61
CCDC38-201ENST00000344280 YTHDC1Q96MU7 727 aaKnown RBP31.35■■■□□ 2.61
CCDC38-201ENST00000344280 SETD5Q9C0A6 1442 aa31.34■■■□□ 2.61
CCDC38-201ENST00000344280 MAPKBP1O60336 1514 aa31.32■■■□□ 2.6
CCDC38-201ENST00000344280 SNAPC4Q5SXM2 1469 aa31.31■■■□□ 2.6
CCDC38-201ENST00000344280 FMN1Q68DA7 1419 aa31.31■■■□□ 2.6
CCDC38-201ENST00000344280 GTF3C3Q9Y5Q9 886 aa31.28■■■□□ 2.6
CCDC38-201ENST00000344280 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
CCDC38-201ENST00000344280 SAMD9Q5K651 1589 aa31.27■■■□□ 2.6
CCDC38-201ENST00000344280 LRRIQ1Q96JM4 1722 aa31.19■■■□□ 2.58
CCDC38-201ENST00000344280 MTUS2Q5JR59 1369 aa31.14■■■□□ 2.58
CCDC38-201ENST00000344280 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
CCDC38-201ENST00000344280 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
CCDC38-201ENST00000344280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.12■■■□□ 2.57
CCDC38-201ENST00000344280 SIN3AQ96ST3 1273 aa31.1■■■□□ 2.57
CCDC38-201ENST00000344280 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
CCDC38-201ENST00000344280 PELP1Q8IZL8 1130 aaKnown RBP31.05■■■□□ 2.56
CCDC38-201ENST00000344280 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
CCDC38-201ENST00000344280 NCOA2Q15596 1464 aa31.02■■■□□ 2.56
CCDC38-201ENST00000344280 PTPRKQ15262 1439 aa31.02■■■□□ 2.56
CCDC38-201ENST00000344280 THOC2Q8NI27 1593 aaKnown RBP30.99■■■□□ 2.55
CCDC38-201ENST00000344280 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
CCDC38-201ENST00000344280 MAGI3Q5TCQ9 1506 aa30.96■■■□□ 2.55
CCDC38-201ENST00000344280 MYOM3Q5VTT5 1437 aa30.95■■■□□ 2.55
CCDC38-201ENST00000344280 IQGAP2Q13576 1575 aa30.94■■■□□ 2.54
CCDC38-201ENST00000344280 EHBP1L1Q8N3D4 1523 aa30.93■■■□□ 2.54
CCDC38-201ENST00000344280 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
CCDC38-201ENST00000344280 SUPT6HQ7KZ85 1726 aaKnown RBP30.92■■■□□ 2.54
CCDC38-201ENST00000344280 HFM1A2PYH4 1435 aa30.88■■■□□ 2.53
CCDC38-201ENST00000344280 CCDC18Q5T9S5 1454 aa30.88■■■□□ 2.53
CCDC38-201ENST00000344280 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
CCDC38-201ENST00000344280 ARHGEF11O15085 1522 aa30.86■■■□□ 2.53
CCDC38-201ENST00000344280 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
CCDC38-201ENST00000344280 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
CCDC38-201ENST00000344280 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
CCDC38-201ENST00000344280 NAIPQ13075 1403 aa30.81■■■□□ 2.52
CCDC38-201ENST00000344280 ARID3CA6NKF2 412 aa30.81■■■□□ 2.52
CCDC38-201ENST00000344280 EPRSP07814 1512 aaKnown RBP30.81■■■□□ 2.52
CCDC38-201ENST00000344280 WDR62O43379 1518 aa30.8■■■□□ 2.52
CCDC38-201ENST00000344280 CDK13Q14004 1512 aaKnown RBP30.79■■■□□ 2.52
CCDC38-201ENST00000344280 TIMELESSQ9UNS1 1208 aa30.78■■■□□ 2.52
CCDC38-201ENST00000344280 UACAQ9BZF9 1416 aa30.76■■■□□ 2.52
CCDC38-201ENST00000344280 PPP1R15AO75807 674 aaPredicted RBP30.76■■■□□ 2.51
CCDC38-201ENST00000344280 CHIC2Q9UKJ5 165 aa30.7■■■□□ 2.51
CCDC38-201ENST00000344280 TCOF1Q13428 1488 aaKnown RBP30.69■■■□□ 2.5
CCDC38-201ENST00000344280 RRP7BPQ9NSQ0 103 aa30.69■■■□□ 2.5
CCDC38-201ENST00000344280 HIRIP3Q9BW71 556 aaPredicted RBP30.68■■■□□ 2.5
CCDC38-201ENST00000344280 DISP1Q96F81 1524 aa30.66■■■□□ 2.5
CCDC38-201ENST00000344280 KIAA0586Q9BVV6 1533 aa30.66■■■□□ 2.5
CCDC38-201ENST00000344280 EIF4G3O43432 1585 aaKnown RBP30.65■■■□□ 2.5
CCDC38-201ENST00000344280 DDX10Q13206 875 aaKnown RBP30.64■■■□□ 2.5
CCDC38-201ENST00000344280 KCNH8Q96L42 1107 aa30.64■■■□□ 2.5
CCDC38-201ENST00000344280 TONSLQ96HA7 1378 aa30.63■■■□□ 2.49
CCDC38-201ENST00000344280 KIAA0556O60303 1618 aa30.62■■■□□ 2.49
CCDC38-201ENST00000344280 GRIN2AQ12879 1464 aa30.62■■■□□ 2.49
CCDC38-201ENST00000344280 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
CCDC38-201ENST00000344280 MIA2Q96PC5 1412 aa30.56■■■□□ 2.48
CCDC38-201ENST00000344280 KDM6BO15054 1643 aa30.56■■■□□ 2.48
CCDC38-201ENST00000344280 NUP153P49790 1475 aaKnown RBP30.54■■■□□ 2.48
CCDC38-201ENST00000344280 GCC2Q8IWJ2 1684 aa30.53■■■□□ 2.48
CCDC38-201ENST00000344280 DENND4BO75064 1496 aaPredicted RBP30.53■■■□□ 2.48
CCDC38-201ENST00000344280 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
CCDC38-201ENST00000344280 AKNAQ7Z591 1439 aa30.48■■■□□ 2.47
CCDC38-201ENST00000344280 TRIM52Q96A61 297 aa30.48■■■□□ 2.47
CCDC38-201ENST00000344280 RAPGEF6Q8TEU7 1601 aa30.47■■■□□ 2.47
CCDC38-201ENST00000344280 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
CCDC38-201ENST00000344280 ZNF644Q9H582 1327 aaPredicted RBP30.45■■■□□ 2.46
CCDC38-201ENST00000344280 CEP170Q5SW79 1584 aa30.44■■■□□ 2.46
CCDC38-201ENST00000344280 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
CCDC38-201ENST00000344280 FBLN2P98095 1184 aa30.43■■■□□ 2.46
CCDC38-201ENST00000344280 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
CCDC38-201ENST00000344280 DAPK1P53355 1430 aa30.39■■■□□ 2.46
CCDC38-201ENST00000344280 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
CCDC38-201ENST00000344280 PLB1Q6P1J6 1458 aa30.37■■■□□ 2.45
CCDC38-201ENST00000344280 ABCC5O15440 1437 aa30.37■■■□□ 2.45
CCDC38-201ENST00000344280 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms