RNA–Protein interactions for RNA: ENST00000343523.6

DMD-202, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 5,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-202ENST00000343523 WDR43Q15061 677 aaKnown RBP eCLIP8.86□□□□□ -0.99
DMD-202ENST00000343523 AEBP2Q6ZN18 517 aaPredicted RBP8.86□□□□□ -0.99
DMD-202ENST00000343523 SUPT16HQ9Y5B9 1047 aaKnown RBP8.85□□□□□ -0.99
DMD-202ENST00000343523 CLIP1P30622 1438 aa8.84□□□□□ -0.99
DMD-202ENST00000343523 BECN1Q14457 450 aa8.84□□□□□ -0.99
DMD-202ENST00000343523 TRIM44Q96DX7 344 aaPredicted RBP8.83□□□□□ -1
DMD-202ENST00000343523 CDK11BP21127 795 aaKnown RBP8.83□□□□□ -1
DMD-202ENST00000343523 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
DMD-202ENST00000343523 BAZ1BQ9UIG0 1483 aaKnown RBP8.82□□□□□ -1
DMD-202ENST00000343523 RTN4Q9NQC3 1192 aaKnown RBP8.82□□□□□ -1
DMD-202ENST00000343523 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
DMD-202ENST00000343523 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
DMD-202ENST00000343523 TRHP20396 242 aaPredicted RBP8.81□□□□□ -1
DMD-202ENST00000343523 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
DMD-202ENST00000343523 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
DMD-202ENST00000343523 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -13e-9■■■□□ 15.5
DMD-202ENST00000343523 LAS1LQ9Y4W2 734 aaKnown RBP8.79□□□□□ -1
DMD-202ENST00000343523 SMARCA2P51531 1590 aa8.79□□□□□ -1
DMD-202ENST00000343523 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
DMD-202ENST00000343523 MYH16Q9H6N6 1097 aa8.77□□□□□ -1
DMD-202ENST00000343523 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
DMD-202ENST00000343523 NAP1L5Q96NT1 182 aaPredicted RBP8.77□□□□□ -1.01
DMD-202ENST00000343523 ERCC6Q03468 1493 aa8.77□□□□□ -1.01
DMD-202ENST00000343523 KDM2AQ9Y2K7 1162 aa8.77□□□□□ -1.01
DMD-202ENST00000343523 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
DMD-202ENST00000343523 MTUS2Q5JR59 1369 aa8.76□□□□□ -1.01
DMD-202ENST00000343523 GOLGA6L22H0YM25 854 aa8.76□□□□□ -1.01
DMD-202ENST00000343523 DEKP35659 375 aaKnown RBP8.75□□□□□ -1.01
DMD-202ENST00000343523 MROH2BQ7Z745 1585 aa8.75□□□□□ -1.01
DMD-202ENST00000343523 TNNT2P45379 298 aaPredicted RBP8.75□□□□□ -1.01
DMD-202ENST00000343523 PLPPR3Q6T4P5 718 aa8.75□□□□□ -1.01
DMD-202ENST00000343523 NCLP19338 710 aaKnown RBP8.74□□□□□ -1.01
DMD-202ENST00000343523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.73□□□□□ -1.01
DMD-202ENST00000343523 SENP3-EIF4A1A0A087X0R7 540 aa8.73□□□□□ -1.01
DMD-202ENST00000343523 PTMAP06454 111 aaKnown RBP8.72□□□□□ -1.01
DMD-202ENST00000343523 RBM19Q9Y4C8 960 aaKnown RBP8.72□□□□□ -1.01
DMD-202ENST00000343523 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.01
DMD-202ENST00000343523 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.01
DMD-202ENST00000343523 TSPY4P0CV99 314 aa8.71□□□□□ -1.02
DMD-202ENST00000343523 TSPY10P0CW01 314 aa8.71□□□□□ -1.02
DMD-202ENST00000343523 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
DMD-202ENST00000343523 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
DMD-202ENST00000343523 DNTTIP2Q5QJE6 756 aaKnown RBP8.69□□□□□ -1.02
DMD-202ENST00000343523 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
DMD-202ENST00000343523 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
DMD-202ENST00000343523 RGS3P49796 1198 aa8.67□□□□□ -1.02
DMD-202ENST00000343523 ARID4BQ4LE39 1312 aaPredicted RBP8.66□□□□□ -1.02
DMD-202ENST00000343523 TOP2AP11388 1531 aaKnown RBP8.66□□□□□ -1.02
DMD-202ENST00000343523 SOGA1O94964 1423 aa8.66□□□□□ -1.02
DMD-202ENST00000343523 ZRSR1Q15695 479 aaKnown RBP8.66□□□□□ -1.02
DMD-202ENST00000343523 VPS8Q8N3P4 1428 aa8.66□□□□□ -1.02
DMD-202ENST00000343523 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
DMD-202ENST00000343523 CASC1Q6TDU7 716 aa8.65□□□□□ -1.02
DMD-202ENST00000343523 FTSJ3Q8IY81 847 aaKnown RBP8.65□□□□□ -1.02
DMD-202ENST00000343523 SIN3AQ96ST3 1273 aa8.65□□□□□ -1.02
DMD-202ENST00000343523 CCER2I3L3R5 266 aa8.64□□□□□ -1.03
DMD-202ENST00000343523 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
DMD-202ENST00000343523 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
DMD-202ENST00000343523 TPRNQ4KMQ1 711 aa8.63□□□□□ -1.03
DMD-202ENST00000343523 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
DMD-202ENST00000343523 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
DMD-202ENST00000343523 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
DMD-202ENST00000343523 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
DMD-202ENST00000343523 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
DMD-202ENST00000343523 CCNB3Q8WWL7 1395 aa8.62□□□□□ -1.03
DMD-202ENST00000343523 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
DMD-202ENST00000343523 A0A0G2JS52 829 aa8.61□□□□□ -1.03
DMD-202ENST00000343523 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
DMD-202ENST00000343523 PPP1R15AO75807 674 aaPredicted RBP8.61□□□□□ -1.03
DMD-202ENST00000343523 WIZO95785 1651 aa8.6□□□□□ -1.03
DMD-202ENST00000343523 EIF4G1Q04637 1599 aaKnown RBP8.6□□□□□ -1.03
DMD-202ENST00000343523 MSNP26038 577 aaKnown RBP8.59□□□□□ -1.03
DMD-202ENST00000343523 ABCC8Q09428 1581 aa8.59□□□□□ -1.03
DMD-202ENST00000343523 HSCBQ8IWL3 235 aa8.59□□□□□ -1.03
DMD-202ENST00000343523 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
DMD-202ENST00000343523 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
DMD-202ENST00000343523 C14orf37Q86TY3 774 aa8.59□□□□□ -1.03
DMD-202ENST00000343523 CHMP4BQ9H444 224 aaKnown RBP8.59□□□□□ -1.03
DMD-202ENST00000343523 RGL3Q3MIN7 710 aa8.59□□□□□ -1.03
DMD-202ENST00000343523 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
DMD-202ENST00000343523 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
DMD-202ENST00000343523 BICRAQ9NZM4 1560 aa8.58□□□□□ -1.04
DMD-202ENST00000343523 KIF27Q86VH2 1401 aa8.58□□□□□ -1.04
DMD-202ENST00000343523 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
DMD-202ENST00000343523 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
DMD-202ENST00000343523 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
DMD-202ENST00000343523 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
DMD-202ENST00000343523 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
DMD-202ENST00000343523 GOLGA6L6A8MZA4 724 aa8.56□□□□□ -1.04
DMD-202ENST00000343523 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 NRDCO43847 1150 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 CHAF1AQ13111 956 aaPredicted RBP8.55□□□□□ -1.04
DMD-202ENST00000343523 FOXD1Q16676 465 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 MS4A1P11836 297 aa8.55□□□□□ -1.04
DMD-202ENST00000343523 NUDCQ9Y266 331 aa8.54□□□□□ -1.04
DMD-202ENST00000343523 IPO9Q96P70 1041 aaKnown RBP8.53□□□□□ -1.04
DMD-202ENST00000343523 HSPA5P11021 654 aaKnown RBP8.53□□□□□ -1.04
DMD-202ENST00000343523 SENP3Q9H4L4 574 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms