RNA–Protein interactions for RNA: ENST00000343523.6

DMD-202, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 5,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-202ENST00000343523 NISCHQ9Y2I1 1504 aa11.41□□□□□ -0.58
DMD-202ENST00000343523 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
DMD-202ENST00000343523 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
DMD-202ENST00000343523 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
DMD-202ENST00000343523 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
DMD-202ENST00000343523 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
DMD-202ENST00000343523 PCGF6Q9BYE7 350 aa10.4□□□□□ -0.74
DMD-202ENST00000343523 FAM9AQ8IZU1 332 aaPredicted RBP10.38□□□□□ -0.75
DMD-202ENST00000343523 APLP2Q06481 763 aa10.33□□□□□ -0.76
DMD-202ENST00000343523 CENPBP07199 599 aaPredicted RBP10.32□□□□□ -0.76
DMD-202ENST00000343523 MYT1Q01538 1121 aa10.27□□□□□ -0.76
DMD-202ENST00000343523 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
DMD-202ENST00000343523 ERICH6Q7L0X2 663 aa10.26□□□□□ -0.77
DMD-202ENST00000343523 TTBK1Q5TCY1 1321 aaPredicted RBP10.21□□□□□ -0.77
DMD-202ENST00000343523 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
DMD-202ENST00000343523 YTHDC1Q96MU7 727 aaKnown RBP10.07□□□□□ -0.8
DMD-202ENST00000343523 HRCP23327 699 aa10.05□□□□□ -0.8
DMD-202ENST00000343523 NEFLP07196 543 aa10.01□□□□□ -0.81
DMD-202ENST00000343523 TRIM41Q8WV44 630 aa10□□□□□ -0.81
DMD-202ENST00000343523 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
DMD-202ENST00000343523 TRIM26Q12899 539 aaPredicted RBP9.93□□□□□ -0.82
DMD-202ENST00000343523 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
DMD-202ENST00000343523 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
DMD-202ENST00000343523 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
DMD-202ENST00000343523 CHIC1Q5VXU3 224 aa9.8□□□□□ -0.84
DMD-202ENST00000343523 CCDC180Q9P1Z9 1646 aa9.78□□□□□ -0.84
DMD-202ENST00000343523 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
DMD-202ENST00000343523 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
DMD-202ENST00000343523 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
DMD-202ENST00000343523 ABCC9O60706 1549 aa9.63□□□□□ -0.87
DMD-202ENST00000343523 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
DMD-202ENST00000343523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
DMD-202ENST00000343523 ITGAEP38570 1179 aa9.6□□□□□ -0.87
DMD-202ENST00000343523 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
DMD-202ENST00000343523 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
DMD-202ENST00000343523 POLR3GLQ9BT43 218 aa9.57□□□□□ -0.88
DMD-202ENST00000343523 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
DMD-202ENST00000343523 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
DMD-202ENST00000343523 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
DMD-202ENST00000343523 BCANQ96GW7 911 aa9.5□□□□□ -0.89
DMD-202ENST00000343523 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
DMD-202ENST00000343523 CNGB1Q14028 1251 aaPredicted RBP9.49□□□□□ -0.89
DMD-202ENST00000343523 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
DMD-202ENST00000343523 CDK11AQ9UQ88 783 aaPredicted RBP9.42□□□□□ -0.9
DMD-202ENST00000343523 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
DMD-202ENST00000343523 ANP32CO43423 234 aa9.36□□□□□ -0.91
DMD-202ENST00000343523 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
DMD-202ENST00000343523 NEUROD1Q13562 356 aa9.35□□□□□ -0.91
DMD-202ENST00000343523 FAM50AQ14320 339 aaKnown RBP9.35□□□□□ -0.91
DMD-202ENST00000343523 NACADO15069 1562 aa9.33□□□□□ -0.92
DMD-202ENST00000343523 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
DMD-202ENST00000343523 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
DMD-202ENST00000343523 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
DMD-202ENST00000343523 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
DMD-202ENST00000343523 ANP32AP39687 249 aaKnown RBP9.27□□□□□ -0.92
DMD-202ENST00000343523 SCAF1Q9H7N4 1312 aaKnown RBP9.27□□□□□ -0.93
DMD-202ENST00000343523 PABPN1Q86U42 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
DMD-202ENST00000343523 FKBP8Q14318 412 aa9.22□□□□□ -0.93
DMD-202ENST00000343523 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
DMD-202ENST00000343523 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
DMD-202ENST00000343523 SCRIBQ14160 1630 aa9.19□□□□□ -0.94
DMD-202ENST00000343523 EIF5BO60841 1220 aaKnown RBP9.18□□□□□ -0.94
DMD-202ENST00000343523 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
DMD-202ENST00000343523 NEFMP07197 916 aa9.16□□□□□ -0.94
DMD-202ENST00000343523 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
DMD-202ENST00000343523 NBR1Q14596 966 aa9.11□□□□□ -0.95
DMD-202ENST00000343523 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
DMD-202ENST00000343523 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
DMD-202ENST00000343523 HNRNPUQ00839 825 aaKnown RBP eCLIP9.09□□□□□ -0.95
DMD-202ENST00000343523 FBLN2P98095 1184 aa9.08□□□□□ -0.96
DMD-202ENST00000343523 BCL11AQ9H165 835 aa9.07□□□□□ -0.96
DMD-202ENST00000343523 ANP32BQ92688 251 aaKnown RBP9.06□□□□□ -0.96
DMD-202ENST00000343523 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
DMD-202ENST00000343523 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
DMD-202ENST00000343523 DDX10Q13206 875 aaKnown RBP9.05□□□□□ -0.96
DMD-202ENST00000343523 TONSLQ96HA7 1378 aa9.05□□□□□ -0.96
DMD-202ENST00000343523 MIER1Q8N108 512 aa9.04□□□□□ -0.96
DMD-202ENST00000343523 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
DMD-202ENST00000343523 ANP32EQ9BTT0 268 aa9.01□□□□□ -0.97
DMD-202ENST00000343523 CCDC136Q96JN2 1154 aa9.01□□□□□ -0.97
DMD-202ENST00000343523 UPF2Q9HAU5 1272 aaKnown RBP9.01□□□□□ -0.97
DMD-202ENST00000343523 P3H3Q8IVL6 736 aa9□□□□□ -0.97
DMD-202ENST00000343523 HSP90AA1P07900 732 aaKnown RBP9□□□□□ -0.97
DMD-202ENST00000343523 IRX6P78412 446 aaPredicted RBP8.98□□□□□ -0.97
DMD-202ENST00000343523 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
DMD-202ENST00000343523 ARXQ96QS3 562 aa8.97□□□□□ -0.97
DMD-202ENST00000343523 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
DMD-202ENST00000343523 SALL2Q9Y467 1007 aaPredicted RBP8.94□□□□□ -0.98
DMD-202ENST00000343523 BAZ1AQ9NRL2 1556 aaPredicted RBP8.93□□□□□ -0.98
DMD-202ENST00000343523 MRS2Q9HD23 443 aa8.92□□□□□ -0.98
DMD-202ENST00000343523 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
DMD-202ENST00000343523 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
DMD-202ENST00000343523 EEA1Q15075 1411 aa8.91□□□□□ -0.98
DMD-202ENST00000343523 TMC1Q8TDI8 760 aa8.91□□□□□ -0.98
DMD-202ENST00000343523 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
DMD-202ENST00000343523 CEP162Q5TB80 1403 aa8.91□□□□□ -0.98
DMD-202ENST00000343523 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
DMD-202ENST00000343523 HIRIP3Q9BW71 556 aaPredicted RBP8.87□□□□□ -0.99
DMD-202ENST00000343523 STAG3Q9UJ98 1225 aa8.86□□□□□ -0.99
DMD-202ENST00000343523 GOLGA3Q08378 1498 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms