RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.24■□□□□ 0.67
SYDE1-201ENST00000342784 DDX10Q13206 875 aaKnown RBP19.22■□□□□ 0.67
SYDE1-201ENST00000342784 CLIP1P30622 1438 aa19.2■□□□□ 0.66
SYDE1-201ENST00000342784 CFTRP13569 1480 aa19.17■□□□□ 0.66
SYDE1-201ENST00000342784 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
SYDE1-201ENST00000342784 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
SYDE1-201ENST00000342784 ANP32CO43423 234 aa19.1■□□□□ 0.65
SYDE1-201ENST00000342784 ERICH6BQ5W0A0 696 aa19.1■□□□□ 0.65
SYDE1-201ENST00000342784 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
SYDE1-201ENST00000342784 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
SYDE1-201ENST00000342784 NBR1Q14596 966 aa19.08■□□□□ 0.64
SYDE1-201ENST00000342784 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
SYDE1-201ENST00000342784 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
SYDE1-201ENST00000342784 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
SYDE1-201ENST00000342784 CCER2I3L3R5 266 aa19.01■□□□□ 0.63
SYDE1-201ENST00000342784 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
SYDE1-201ENST00000342784 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
SYDE1-201ENST00000342784 CUX1P39880 1505 aa18.96■□□□□ 0.63
SYDE1-201ENST00000342784 NOP58Q9Y2X3 529 aaKnown RBP18.96■□□□□ 0.63
SYDE1-201ENST00000342784 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
SYDE1-201ENST00000342784 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
SYDE1-201ENST00000342784 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
SYDE1-201ENST00000342784 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
SYDE1-201ENST00000342784 IL27Q8NEV9 243 aa18.91■□□□□ 0.62
SYDE1-201ENST00000342784 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
SYDE1-201ENST00000342784 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
SYDE1-201ENST00000342784 PPP4R2Q9NY27 417 aa18.89■□□□□ 0.61
SYDE1-201ENST00000342784 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
SYDE1-201ENST00000342784 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
SYDE1-201ENST00000342784 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
SYDE1-201ENST00000342784 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
SYDE1-201ENST00000342784 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.61
SYDE1-201ENST00000342784 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
SYDE1-201ENST00000342784 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
SYDE1-201ENST00000342784 KIF21BO75037 1637 aa18.82■□□□□ 0.6
SYDE1-201ENST00000342784 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
SYDE1-201ENST00000342784 CUX2O14529 1486 aa18.82■□□□□ 0.6
SYDE1-201ENST00000342784 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
SYDE1-201ENST00000342784 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
SYDE1-201ENST00000342784 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
SYDE1-201ENST00000342784 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
SYDE1-201ENST00000342784 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
SYDE1-201ENST00000342784 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
SYDE1-201ENST00000342784 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
SYDE1-201ENST00000342784 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
SYDE1-201ENST00000342784 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
SYDE1-201ENST00000342784 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
SYDE1-201ENST00000342784 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
SYDE1-201ENST00000342784 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
SYDE1-201ENST00000342784 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
SYDE1-201ENST00000342784 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
SYDE1-201ENST00000342784 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
SYDE1-201ENST00000342784 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
SYDE1-201ENST00000342784 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
SYDE1-201ENST00000342784 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
SYDE1-201ENST00000342784 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
SYDE1-201ENST00000342784 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
SYDE1-201ENST00000342784 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
SYDE1-201ENST00000342784 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.58
SYDE1-201ENST00000342784 SETD5Q9C0A6 1442 aa18.64■□□□□ 0.57
SYDE1-201ENST00000342784 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
SYDE1-201ENST00000342784 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
SYDE1-201ENST00000342784 FBLN2P98095 1184 aa18.62■□□□□ 0.57
SYDE1-201ENST00000342784 ZMYND15Q9H091 742 aa18.62■□□□□ 0.57
SYDE1-201ENST00000342784 IGF1RP08069 1367 aa18.59■□□□□ 0.57
SYDE1-201ENST00000342784 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
SYDE1-201ENST00000342784 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
SYDE1-201ENST00000342784 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
SYDE1-201ENST00000342784 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
SYDE1-201ENST00000342784 CARMIL1Q5VZK9 1371 aa18.57■□□□□ 0.56
SYDE1-201ENST00000342784 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
SYDE1-201ENST00000342784 NPM2Q86SE8 214 aaKnown RBP18.55■□□□□ 0.56
SYDE1-201ENST00000342784 NEFMP07197 916 aa18.55■□□□□ 0.56
SYDE1-201ENST00000342784 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
SYDE1-201ENST00000342784 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
SYDE1-201ENST00000342784 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
SYDE1-201ENST00000342784 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
SYDE1-201ENST00000342784 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
SYDE1-201ENST00000342784 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
SYDE1-201ENST00000342784 PDE4CQ08493 712 aa18.48■□□□□ 0.55
SYDE1-201ENST00000342784 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
SYDE1-201ENST00000342784 PRXQ9BXM0 1461 aa18.46■□□□□ 0.54
SYDE1-201ENST00000342784 GLIPR1L2Q4G1C9 344 aa18.45■□□□□ 0.54
SYDE1-201ENST00000342784 USP35Q9P2H5 1018 aa18.45■□□□□ 0.54
SYDE1-201ENST00000342784 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
SYDE1-201ENST00000342784 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
SYDE1-201ENST00000342784 WDR62O43379 1518 aa18.41■□□□□ 0.54
SYDE1-201ENST00000342784 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
SYDE1-201ENST00000342784 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
SYDE1-201ENST00000342784 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
SYDE1-201ENST00000342784 FGD1P98174 961 aa18.38■□□□□ 0.53
SYDE1-201ENST00000342784 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
SYDE1-201ENST00000342784 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
SYDE1-201ENST00000342784 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
SYDE1-201ENST00000342784 PDIA4P13667 645 aaKnown RBP18.37■□□□□ 0.53
SYDE1-201ENST00000342784 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
SYDE1-201ENST00000342784 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
SYDE1-201ENST00000342784 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
SYDE1-201ENST00000342784 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
SYDE1-201ENST00000342784 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms