RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
MUC4-202ENST00000339251 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
MUC4-202ENST00000339251 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
MUC4-202ENST00000339251 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
MUC4-202ENST00000339251 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
MUC4-202ENST00000339251 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
MUC4-202ENST00000339251 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
MUC4-202ENST00000339251 NESP48681 1621 aa15.9■□□□□ 0.14
MUC4-202ENST00000339251 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
MUC4-202ENST00000339251 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
MUC4-202ENST00000339251 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
MUC4-202ENST00000339251 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
MUC4-202ENST00000339251 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
MUC4-202ENST00000339251 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
MUC4-202ENST00000339251 POLR3GLQ9BT43 218 aa15.8■□□□□ 0.12
MUC4-202ENST00000339251 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
MUC4-202ENST00000339251 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
MUC4-202ENST00000339251 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
MUC4-202ENST00000339251 NBR1Q14596 966 aa15.77■□□□□ 0.11
MUC4-202ENST00000339251 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
MUC4-202ENST00000339251 TOP2BQ02880 1626 aa15.75■□□□□ 0.11
MUC4-202ENST00000339251 ARHGAP35Q9NRY4 1499 aa15.75■□□□□ 0.11
MUC4-202ENST00000339251 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
MUC4-202ENST00000339251 MSH5O43196 834 aa15.74■□□□□ 0.11
MUC4-202ENST00000339251 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
MUC4-202ENST00000339251 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
MUC4-202ENST00000339251 MRS2Q9HD23 443 aa15.73■□□□□ 0.11
MUC4-202ENST00000339251 PHLDB1Q86UU1 1377 aa15.73■□□□□ 0.11
MUC4-202ENST00000339251 CUX2O14529 1486 aa15.72■□□□□ 0.11
MUC4-202ENST00000339251 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
MUC4-202ENST00000339251 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
MUC4-202ENST00000339251 MAPKBP1O60336 1514 aa15.7■□□□□ 0.1
MUC4-202ENST00000339251 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
MUC4-202ENST00000339251 CHIC2Q9UKJ5 165 aa15.69■□□□□ 0.1
MUC4-202ENST00000339251 EIF4G2P78344 907 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■■■■■ 34.3
MUC4-202ENST00000339251 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
MUC4-202ENST00000339251 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
MUC4-202ENST00000339251 CFTRP13569 1480 aa15.67■□□□□ 0.1
MUC4-202ENST00000339251 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
MUC4-202ENST00000339251 HSPA5P11021 654 aaKnown RBP15.65■□□□□ 0.1
MUC4-202ENST00000339251 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
MUC4-202ENST00000339251 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
MUC4-202ENST00000339251 FANCD2Q9BXW9 1451 aa15.63■□□□□ 0.09
MUC4-202ENST00000339251 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
MUC4-202ENST00000339251 NOP58Q9Y2X3 529 aaKnown RBP15.62■□□□□ 0.09
MUC4-202ENST00000339251 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
MUC4-202ENST00000339251 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
MUC4-202ENST00000339251 TIAM1Q13009 1591 aa15.61■□□□□ 0.09
MUC4-202ENST00000339251 IGF1RP08069 1367 aa15.6■□□□□ 0.09
MUC4-202ENST00000339251 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
MUC4-202ENST00000339251 CUX1P39880 1505 aa15.59■□□□□ 0.09
MUC4-202ENST00000339251 FHOD3Q2V2M9 1422 aa15.59■□□□□ 0.09
MUC4-202ENST00000339251 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
MUC4-202ENST00000339251 NPM2Q86SE8 214 aaKnown RBP15.59■□□□□ 0.09
MUC4-202ENST00000339251 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.09
MUC4-202ENST00000339251 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
MUC4-202ENST00000339251 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
MUC4-202ENST00000339251 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
MUC4-202ENST00000339251 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
MUC4-202ENST00000339251 WASHC2AQ641Q2 1341 aa15.52■□□□□ 0.08
MUC4-202ENST00000339251 CCDC184Q52MB2 194 aa15.51■□□□□ 0.07
MUC4-202ENST00000339251 FOXD1Q16676 465 aa15.49■□□□□ 0.07
MUC4-202ENST00000339251 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
MUC4-202ENST00000339251 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
MUC4-202ENST00000339251 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
MUC4-202ENST00000339251 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
MUC4-202ENST00000339251 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
MUC4-202ENST00000339251 FMN1Q68DA7 1419 aa15.46■□□□□ 0.07
MUC4-202ENST00000339251 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
MUC4-202ENST00000339251 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.06
MUC4-202ENST00000339251 TMC1Q8TDI8 760 aa15.46■□□□□ 0.06
MUC4-202ENST00000339251 SALL2Q9Y467 1007 aaPredicted RBP15.45■□□□□ 0.06
MUC4-202ENST00000339251 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
MUC4-202ENST00000339251 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
MUC4-202ENST00000339251 PRKCSHP14314 528 aaPredicted RBP15.44■□□□□ 0.06
MUC4-202ENST00000339251 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
MUC4-202ENST00000339251 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
MUC4-202ENST00000339251 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
MUC4-202ENST00000339251 FBLN2P98095 1184 aa15.41■□□□□ 0.06
MUC4-202ENST00000339251 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
MUC4-202ENST00000339251 CNTLNQ9NXG0 1405 aa15.41■□□□□ 0.06
MUC4-202ENST00000339251 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
MUC4-202ENST00000339251 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
MUC4-202ENST00000339251 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
MUC4-202ENST00000339251 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
MUC4-202ENST00000339251 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
MUC4-202ENST00000339251 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
MUC4-202ENST00000339251 LAS1LQ9Y4W2 734 aaKnown RBP15.39■□□□□ 0.05
MUC4-202ENST00000339251 CASKIN1Q8WXD9 1431 aa15.38■□□□□ 0.05
MUC4-202ENST00000339251 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
MUC4-202ENST00000339251 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
MUC4-202ENST00000339251 CCDC7Q96M83 1385 aa15.38■□□□□ 0.05
MUC4-202ENST00000339251 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
MUC4-202ENST00000339251 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
MUC4-202ENST00000339251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.37■□□□□ 0.05
MUC4-202ENST00000339251 C11orf95C9JLR9 678 aaPredicted RBP15.35■□□□□ 0.05
MUC4-202ENST00000339251 NEFMP07197 916 aa15.34■□□□□ 0.05
MUC4-202ENST00000339251 NAIPQ13075 1403 aa15.34■□□□□ 0.05
MUC4-202ENST00000339251 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
MUC4-202ENST00000339251 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms